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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:1333018..1333754- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006324-T1 ID=CBS51388_006324-T1|Name=CBS51388_006324-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=737bp|location=Sequence derived from alignment at An09:1333018..1333754- (Aspergillus niger CBS 513.88)
ATGGCAGCACAAGCTCCTGCCGCGCGACGCGGGGCTCTCATTGTGGTCGA
GGGGTTGGACCGCGCGGGCAAGTCCAGTCAATGCGAGTCTCTACACCAGA
AACTACAAGATTTAGGCCATTCTGTCAAGTACATTCGCTTCCCAGGTAGC
TCCCCTCCCTTTTTTGATTGTCCTCGTGAACATCGCTCTAATCCACACCC
TCCGCAGACCGAACCACTCCCATTGGAAAGCTCATCGATGGCTATCTACG
TGGCCAGTCGCAGTTGGACGACCACTCCATCCATCTCCTCTTCTCCGCCA
ATCGTTGGGAGATTGCTCGGGCTATTGAGGAGGATATAGCAGCGGGCATC
ACCGTCATCGTGGACCGCTACTCCTATTCCGGTGCCGTGTACTCGGCCGC
CAAGGCCAATCCCACCTTGTCCCTGGAGTGGGCTTGGACCCCGGAGATCG
GCCTGCCCCAGCCTGACCTATGCCTTTTCCTGAGTATCGCCCCAGACGAA
GCGGCCAAGCGCGGGGGGTTCGGTGCCGAACGCTATGAGAATGAGACTAT
GCAAAGCCGAGTGCGGGAACTGTTCCAAACCATCTTTCGCGTCCAACGCA
GCGGTGACATTCGCGTAATCGATGCTGGCAGGTCATTTGAAGCTGTTTCG
GTGGACATTGAGAAGAGCGTGGTGGACTGCATAGCTCGCTTGGACGCCAT
CGGGCCACTGAAGCGATTCGTGTCAATTGCTGTTTAA back to topCoding sequence (CDS) from alignment at An09:1333018..1333754- >CBS51388_006324-T1 ID=CBS51388_006324-T1|Name=CBS51388_006324-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1350bp|location=Sequence derived from alignment at An09:1333018..1333754- (Aspergillus niger CBS 513.88)
ACCGAACCACTCCCATTGGAAAGCTCATCGATGGCTATCTACGTGGCCAG
TCGCAGTTGGACGACCACTCCATCCATCTCCTCTTCTCCGCCAATCGTTG
GGAGATTGCTCGGGCTATTGAGGAGGATATAGCAGCGGGCATCACCGTCA
TCGTGGACCGCTACTCCTATTCCGGTGCCGTGTACTCGGCCGCCAAGGCC
AATCCCACCTTGTCCCTGGAGTGGGCTTGGACCCCGGAGATCGGCCTGCC
CCAGCCTGACCTATGCCTTTTCCTGAGTATCGCCCCAGACGAAGCGGCCA
AGCGCGGGGGGTTCGGTGCCGAACGCTATGAGAATGAGACTATGCAAAGC
CGAGTGCGGGAACTGTTCCAAACCATCTTTCGCGTCCAACGCAGCGGTGA
CATTCGCGTAATCGATGCTGGCAGGTCATTTGAAGCTGTTTCGGTGGACA
TTGAGAAGAGCGTGGTGGACTGCATAGCTCGCTTGGACGCCATCGGGCCA
CTGAAGCGATTCGTGTCAATTGCTGTTTAAATGGCAGCACAAGCTCCTGC
CGCGCGACGCGGGGCTCTCATTGTGGTCGAGGGGTTGGACCGCGCGGGCA
AGTCCAGTCAATGCGAGTCTCTACACCAGAAACTACAAGATTTAGGCCAT
TCTGTCAAGTACATTCGCTTCCCAGACCGAACCACTCCCATTGGAAAGCT
CATCGATGGCTATCTACGTGGCCAGTCGCAGTTGGACGACCACTCCATCC
ATCTCCTCTTCTCCGCCAATCGTTGGGAGATTGCTCGGGCTATTGAGGAG
GATATAGCAGCGGGCATCACCGTCATCGTGGACCGCTACTCCTATTCCGG
TGCCGTGTACTCGGCCGCCAAGGCCAATCCCACCTTGTCCCTGGAGTGGG
CTTGGACCCCGGAGATCGGCCTGCCCCAGCCTGACCTATGCCTTTTCCTG
AGTATCGCCCCAGACGAAGCGGCCAAGCGCGGGGGGTTCGGTGCCGAACG
CTATGAGAATGAGACTATGCAAAGCCGAGTGCGGGAACTGTTCCAAACCA
TCTTTCGCGTCCAACGCAGCGGTGACATTCGCGTAATCGATGCTGGCAGG
TCATTTGAAGCTGTTTCGGTGGACATTGAGAAGAGCGTGGTGGACTGCAT
AGCTCGCTTGGACGCCATCGGGCCACTGAAGCGATTCGTGTCAATTGCTG
TTTAAATGGCAGCACAAGCTCCTGCCGCGCGACGCGGGGCTCTCATTGTG
GTCGAGGGGTTGGACCGCGCGGGCAAGTCCAGTCAATGCGAGTCTCTACA
CCAGAAACTACAAGATTTAGGCCATTCTGTCAAGTACATTCGCTTCCCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006233 | dTDP biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0004798 | thymidylate kinase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261F9G |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR018095 |
| DBxref | InterPro:IPR018094 |
| DBxref | InterPro:IPR039430 |
| DBxref | PFAM:PF02223 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:1333018..1333754 - |
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