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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:1334322..1335906+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006325-T1 ID=CBS51388_006325-T1|Name=CBS51388_006325-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1585bp|location=Sequence derived from alignment at An09:1334322..1335906+ (Aspergillus niger CBS 513.88)
ATGGGCTCAGAGTCTTCCCCACAGCCATCGAATGAGATGCTCTCCTTCCA
TGTTACGGCCTCCGTCCTGACTCCCCGACTGGGAAGACTGGCCTTTGCCG
GCAGAAAACCCATCTCCACCCCACATTACATCCCTCTGGCCTCCCGAGGC
GTCGTTCCGCATATTGCCCATGATGTGCTGCGTGATCACACAGACATCGG
CAGTCTATATGTCGGTCTCGAAGATTGTATGCCCTCCCAGCCACCCTCTC
TCCTTATCCGGAGGTCGAATCCTCGCTGACCCGAATGCCCATTGGGGCCC
AGATCAGTCGTAGAAAGACAAAGCCAAAAACATCCGCCACCGGTCTATAC
CATTCCCACCGCGCAAGATGAATCGGCCTTGCGCAAGTTCGTCGCTCTGC
CCGATGACCTCCTCTTGATCATGGGCGCACGTCGGGAGCCCCCGATCAAA
TGCCCCCCGGCCAACACGCCAAACTCCGTCGCCATTTACACCTCCGTTGG
GTTCAGACAGCTCGAAGCTACCCAGTACGTCGACGCCGTGCAGAAGCTCA
GCCCGGATATCGTCGTCGGACTGGCAGATCTTGTGCTTGGACACACCCCT
GGCAACAAGAGACGCGGCAAGATGGTGGATCGAACCCACGCTTTCACTAC
GCATGCCACTGGATTGCTCTACGGCAGCACAGTGCCCGAGGAGAACCGAT
CAAAGTCAGCCTACTTCGCTCCTGTCCTCCCTCTCGAAAACGCCCAGCAG
TCAATCTACATGGACGACCTCGAGACCGAGCTCAGACCATACATCTCCGG
CCTGGCACTCTACGAATCGGCTTCCCTATCAGCCATCTCCGAACCGCTCG
GAGACCTCCCCCGCCTCCTCTACAGCGCACCCGCGACTCCACACGATATC
CTCCGCGACGTTTCCCTCGGAGCAGATCTCCTCACCATCCCCTTCATGGG
TGTCTGCTCTGACGCCGGCATCGCCCTGGATTTCACCTTCCCTTCACCCA
ACACCCCCAGGACCGTCACCCAACCTCATGACCTCGCCTTCGACCTGTGG
TCCCCGTCTCACACAACCGACACCTCCCCTCTCTCCAAATCATGCGAATG
CTACACTTGCCGCAATCACCACCGCGCATACATCCATCACCTCCTGACCG
CCAAGGAAATGCTCGCCTGGACACTTCTCCAAGTCCACAACCACCATGTA
ATGGATACTTTCTTCGCTGCCATCCGCGAAAGCATTTCCCGGGGTACCTT
CGAAGCCGACACTCAAACCTTCCAACGCACTTACGTCTCCGAACTACCCA
AGCCTACCGGCCAGGGTCCTCGGTATGTACATATATATACATCCTATTCC
CCGAATTTCATAACCACACCCGCATCCCATAACTGACAACTGATCGCTAT
ATAGACTCCGCGGCTACCAACTCCCCGCGTCTGGGCCCAACCAACCCCGC
CGTAATGCCCGCGCATACGGTAAACTCGACGACGCAATGGAGAAGTTCGC
CGAGTCGCAGTCTTCTCTGGCGACGCCGGATACAGGCGCCGAGGGGCTTG
AGGAGCATGGATTTGGGATGAAGGAGGTGTCATAG back to topCoding sequence (CDS) from alignment at An09:1334322..1335906+ >CBS51388_006325-T1 ID=CBS51388_006325-T1|Name=CBS51388_006325-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4266bp|location=Sequence derived from alignment at An09:1334322..1335906+ (Aspergillus niger CBS 513.88)
ATGGGCTCAGAGTCTTCCCCACAGCCATCGAATGAGATGCTCTCCTTCCA
TGTTACGGCCTCCGTCCTGACTCCCCGACTGGGAAGACTGGCCTTTGCCG
GCAGAAAACCCATCTCCACCCCACATTACATCCCTCTGGCCTCCCGAGGC
GTCGTTCCGCATATTGCCCATGATGTGCTGCGTGATCACACAGACATCGG
CAGTCTATATGTCGGTCTCGAAGATTTCGTAGAAAGACAAAGCCAAAAAC
ATCCGCCACCGGTCTATACCATTCCCACCGCGCAAGATGAATCGGCCTTG
CGCAAGTTCGTCGCTCTGCCCGATGACCTCCTCTTGATCATGGGCGCACG
TCGGGAGCCCCCGATCAAATGCCCCCCGGCCAACACGCCAAACTCCGTCG
CCATTTACACCTCCGTTGGGTTCAGACAGCTCGAAGCTACCCAGTACGTC
GACGCCGTGCAGAAGCTCAGCCCGGATATCGTCGTCGGACTGGCAGATCT
TGTGCTTGGACACACCCCTGGCAACAAGAGACGCGGCAAGATGGTGGATC
GAACCCACGCTTTCACTACGCATGCCACTGGATTGCTCTACGGCAGCACA
GTGCCCGAGGAGAACCGATCAAAGTCAGCCTACTTCGCTCCTGTCCTCCC
TCTCGAAAACGCCCAGCAGTCAATCTACATGGACGACCTCGAGACCGAGC
TCAGACCATACATCTCCGGCCTGGCACTCTACGAATCGGCTTCCCTATCA
GCCATCTCCGAACCGCTCGGAGACCTCCCCCGCCTCCTCTACAGCGCACC
CGCGACTCCACACGATATCCTCCGCGACGTTTCCCTCGGAGCAGATCTCC
TCACCATCCCCTTCATGGGTGTCTGCTCTGACGCCGGCATCGCCCTGGAT
TTCACCTTCCCTTCACCCAACACCCCCAGGACCGTCACCCAACCTCATGA
CCTCGCCTTCGACCTGTGGTCCCCGTCTCACACAACCGACACCTCCCCTC
TCTCCAAATCATGCGAATGCTACACTTGCCGCAATCACCACCGCGCATAC
ATCCATCACCTCCTGACCGCCAAGGAAATGCTCGCCTGGACACTTCTCCA
AGTCCACAACCACCATGTAATGGATACTTTCTTCGCTGCCATCCGCGAAA
GCATTTCCCGGGGTACCTTCGAAGCCGACACTCAAACCTTCCAACGCACT
TACGTCTCCGAACTACCCAAGCCTACCGGCCAGGGTCCTCGACTCCGCGG
CTACCAACTCCCCGCGTCTGGGCCCAACCAACCCCGCCGTAATGCCCGCG
CATACGGTAAACTCGACGACGCAATGGAGAAGTTCGCCGAGTCGCAGTCT
TCTCTGGCGACGCCGGATACAGGCGCCGAGGGGCTTGAGGAGCATGGATT
TGGGATGAAGGAGGTGTCATAGATGGGCTCAGAGTCTTCCCCACAGCCAT
CGAATGAGATGCTCTCCTTCCATGTTACGGCCTCCGTCCTGACTCCCCGA
CTGGGAAGACTGGCCTTTGCCGGCAGAAAACCCATCTCCACCCCACATTA
CATCCCTCTGGCCTCCCGAGGCGTCGTTCCGCATATTGCCCATGATGTGC
TGCGTGATCACACAGACATCGGCAGTCTATATGTCGGTCTCGAAGATTTC
GTAGAAAGACAAAGCCAAAAACATCCGCCACCGGTCTATACCATTCCCAC
CGCGCAAGATGAATCGGCCTTGCGCAAGTTCGTCGCTCTGCCCGATGACC
TCCTCTTGATCATGGGCGCACGTCGGGAGCCCCCGATCAAATGCCCCCCG
GCCAACACGCCAAACTCCGTCGCCATTTACACCTCCGTTGGGTTCAGACA
GCTCGAAGCTACCCAGTACGTCGACGCCGTGCAGAAGCTCAGCCCGGATA
TCGTCGTCGGACTGGCAGATCTTGTGCTTGGACACACCCCTGGCAACAAG
AGACGCGGCAAGATGGTGGATCGAACCCACGCTTTCACTACGCATGCCAC
TGGATTGCTCTACGGCAGCACAGTGCCCGAGGAGAACCGATCAAAGTCAG
CCTACTTCGCTCCTGTCCTCCCTCTCGAAAACGCCCAGCAGTCAATCTAC
ATGGACGACCTCGAGACCGAGCTCAGACCATACATCTCCGGCCTGGCACT
CTACGAATCGGCTTCCCTATCAGCCATCTCCGAACCGCTCGGAGACCTCC
CCCGCCTCCTCTACAGCGCACCCGCGACTCCACACGATATCCTCCGCGAC
GTTTCCCTCGGAGCAGATCTCCTCACCATCCCCTTCATGGGTGTCTGCTC
TGACGCCGGCATCGCCCTGGATTTCACCTTCCCTTCACCCAACACCCCCA
GGACCGTCACCCAACCTCATGACCTCGCCTTCGACCTGTGGTCCCCGTCT
CACACAACCGACACCTCCCCTCTCTCCAAATCATGCGAATGCTACACTTG
CCGCAATCACCACCGCGCATACATCCATCACCTCCTGACCGCCAAGGAAA
TGCTCGCCTGGACACTTCTCCAAGTCCACAACCACCATGTAATGGATACT
TTCTTCGCTGCCATCCGCGAAAGCATTTCCCGGGGTACCTTCGAAGCCGA
CACTCAAACCTTCCAACGCACTTACGTCTCCGAACTACCCAAGCCTACCG
GCCAGGGTCCTCGACTCCGCGGCTACCAACTCCCCGCGTCTGGGCCCAAC
CAACCCCGCCGTAATGCCCGCGCATACGGTAAACTCGACGACGCAATGGA
GAAGTTCGCCGAGTCGCAGTCTTCTCTGGCGACGCCGGATACAGGCGCCG
AGGGGCTTGAGGAGCATGGATTTGGGATGAAGGAGGTGTCATAGATGGGC
TCAGAGTCTTCCCCACAGCCATCGAATGAGATGCTCTCCTTCCATGTTAC
GGCCTCCGTCCTGACTCCCCGACTGGGAAGACTGGCCTTTGCCGGCAGAA
AACCCATCTCCACCCCACATTACATCCCTCTGGCCTCCCGAGGCGTCGTT
CCGCATATTGCCCATGATGTGCTGCGTGATCACACAGACATCGGCAGTCT
ATATGTCGGTCTCGAAGATTTCGTAGAAAGACAAAGCCAAAAACATCCGC
CACCGGTCTATACCATTCCCACCGCGCAAGATGAATCGGCCTTGCGCAAG
TTCGTCGCTCTGCCCGATGACCTCCTCTTGATCATGGGCGCACGTCGGGA
GCCCCCGATCAAATGCCCCCCGGCCAACACGCCAAACTCCGTCGCCATTT
ACACCTCCGTTGGGTTCAGACAGCTCGAAGCTACCCAGTACGTCGACGCC
GTGCAGAAGCTCAGCCCGGATATCGTCGTCGGACTGGCAGATCTTGTGCT
TGGACACACCCCTGGCAACAAGAGACGCGGCAAGATGGTGGATCGAACCC
ACGCTTTCACTACGCATGCCACTGGATTGCTCTACGGCAGCACAGTGCCC
GAGGAGAACCGATCAAAGTCAGCCTACTTCGCTCCTGTCCTCCCTCTCGA
AAACGCCCAGCAGTCAATCTACATGGACGACCTCGAGACCGAGCTCAGAC
CATACATCTCCGGCCTGGCACTCTACGAATCGGCTTCCCTATCAGCCATC
TCCGAACCGCTCGGAGACCTCCCCCGCCTCCTCTACAGCGCACCCGCGAC
TCCACACGATATCCTCCGCGACGTTTCCCTCGGAGCAGATCTCCTCACCA
TCCCCTTCATGGGTGTCTGCTCTGACGCCGGCATCGCCCTGGATTTCACC
TTCCCTTCACCCAACACCCCCAGGACCGTCACCCAACCTCATGACCTCGC
CTTCGACCTGTGGTCCCCGTCTCACACAACCGACACCTCCCCTCTCTCCA
AATCATGCGAATGCTACACTTGCCGCAATCACCACCGCGCATACATCCAT
CACCTCCTGACCGCCAAGGAAATGCTCGCCTGGACACTTCTCCAAGTCCA
CAACCACCATGTAATGGATACTTTCTTCGCTGCCATCCGCGAAAGCATTT
CCCGGGGTACCTTCGAAGCCGACACTCAAACCTTCCAACGCACTTACGTC
TCCGAACTACCCAAGCCTACCGGCCAGGGTCCTCGACTCCGCGGCTACCA
ACTCCCCGCGTCTGGGCCCAACCAACCCCGCCGTAATGCCCGCGCATACG
GTAAACTCGACGACGCAATGGAGAAGTTCGCCGAGTCGCAGTCTTCTCTG
GCGACGCCGGATACAGGCGCCGAGGGGCTTGAGGAGCATGGATTTGGGAT
GAAGGAGGTGTCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006400 | tRNA modification |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008479 | queuine tRNA-ribosyltransferase activity |
| GO:0016763 | transferase activity, transferring pentosyl groups |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR028592 |
| DBxref | InterPro:IPR002616 |
| DBxref | InterPro:IPR036511 |
| DBxref | PFAM:PF01702 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:1334322..1335906 + |
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