CBS51388_006331-T1, CBS51388_006331-T1 (mRNA) Aspergillus niger CBS 513.88

Overview


Name	CBS51388_006331-T1
Unique Name	CBS51388_006331-T1
Type	mRNA
Organism	Aspergillus niger CBS 513.88

Sequences

The following sequences are available for this feature:

mRNA from alignment at An09:1349531..1350798+
coding sequence from alignment at An09:1349531..1350798+

mRNA from alignment at An09:1349531..1350798+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CBS51388_006331-T1 ID=CBS51388_006331-T1|Name=CBS51388_006331-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1268bp|location=Sequence derived from alignment at An09:1349531..1350798+ (Aspergillus niger CBS 513.88)
ATGGGGCTGGCTTCTCTGGGAGGAGCATACGCCAAGCTCGACTTGTCTTC
CTCTAACAACGTGGTTGTGTACTGGGGTGAGTATCCACCCTATGCCAGAG
TCTGACCGTAGTTGACATGTCTGCGATTAGGCCAAAATTCCTATGCAGGA
ACCGGAAGCTTGGCCCAGCAGAACCTGGGCTATTACTGCGATGGTGAGTG
TTCCGCAATCCTCGGAAGAAGAAGCTGTGCTGACTCGAAATTTAGACGGC
AATATTGATGTAAGATCAAGCTTCGACTAGAGAAAATGCATATGAATGAG
ATGCTAACCACCGTCAAGGCCATTGTCCTTGCGTTTGTGATGAACGTCAA
CGGACCTGGAGGAGCACCAGCATACGACTTTTCGCTCACCAGTAAAAATT
GCACGCTGTTCGAAGGCACCAACTTGCCGAATTGTCCCCAAATTGGGTAT
GCTTCATGTTCTCGGAACTGAAGGCAACACGGCTAATACAATGATGCAGT
GCCGATATCACCACGTGCCAGAAGAAGGGGAAGACCATCATCCTGTCAAT
TGGCGGTGCGACGTACAGTGAAGGTGGATTCCAGTCGCAATCTGCTGCTC
AATCCGGTGCCGACCTGATCTGGCAGACTTTCGGCCCCCAGCAGTCCAAC
TCGACGGCGCATCGGCCCTTTGGCAACGCATCGGTGGACGGGTTTGATCT
CGATTTCGAGGCTACTGTGAATAACATGGCGCCGTTCGCGAACCGCCTTC
GTCAACTGTTCGATGCCGAGCCCTCGAAACAATACTTTCTGACGGCAGCG
CCGCAGTGCCCTTACCCCGACCTTGCCGACCAGCAGTTCCTCAACGGGCC
GGTGTCAATGGATGCCGTCTGGGTTCAGTTCTACAACAACCCTTGCGGGT
TGGGCTCATTTGTTCAGGGTCAAAGCACGCAGTCGACCTTCAACTTTGAT
CAGTGGGACAACTGGGCCAAGAACGTGTCTCAGAACCCCAATGTGCGAGT
GATGCTCGGCGTTCCGGCCAATACCGGGGCAGCCGGCTCGGGCTATGTAC
CGGTCTCGCAACTGCAGTCGATCATTCAGTATACCAAGACCTTCAAGAGC
TTTGGCGGCGTGATGATGTGGGATGTCACGCAGGCGTACGCCAACTCGGG
CTTCTTGAGTGGCGTCCGCAGTGCTCTGGGGCAAACGGCCTCGCGGGTTT
TTGGGACTCCATACCGGTACCCCCTGCACTTGTGGGGCCCTGAATCCAGC
ACTAACTGGAAGAAATGA

Coding sequence (CDS) from alignment at An09:1349531..1350798+

>CBS51388_006331-T1 ID=CBS51388_006331-T1|Name=CBS51388_006331-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5250bp|location=Sequence derived from alignment at An09:1349531..1350798+ (Aspergillus niger CBS 513.88)
ATGGGGCTGGCTTCTCTGGGAGGAGCATACGCCAAGCTCGACTTGTCTTC
CTCTAACAACGTGGTTGTGTACTGGGGCCAAAATTCCTATGCAGGAACCG
GAAGCTTGGCCCAGCAGAACCTGGGCTATTACTGCGATGACGGCAATATT
GATGCCATTGTCCTTGCGTTTGTGATGAACGTCAACGGACCTGGAGGAGC
ACCAGCATACGACTTTTCGCTCACCAGTAAAAATTGCACGCTGTTCGAAG
GCACCAACTTGCCGAATTGTCCCCAAATTGGTGCCGATATCACCACGTGC
CAGAAGAAGGGGAAGACCATCATCCTGTCAATTGGCGGTGCGACGTACAG
TGAAGGTGGATTCCAGTCGCAATCTGCTGCTCAATCCGGTGCCGACCTGA
TCTGGCAGACTTTCGGCCCCCAGCAGTCCAACTCGACGGCGCATCGGCCC
TTTGGCAACGCATCGGTGGACGGGTTTGATCTCGATTTCGAGGCTACTGT
GAATAACATGGCGCCGTTCGCGAACCGCCTTCGTCAACTGTTCGATGCCG
AGCCCTCGAAACAATACTTTCTGACGGCAGCGCCGCAGTGCCCTTACCCC
GACCTTGCCGACCAGCAGTTCCTCAACGGGCCGGTGTCAATGGATGCCGT
CTGGGTTCAGTTCTACAACAACCCTTGCGGGTTGGGCTCATTTGTTCAGG
GTCAAAGCACGCAGTCGACCTTCAACTTTGATCAGTGGGACAACTGGGCC
AAGAACGTGTCTCAGAACCCCAATGTGCGAGTGATGCTCGGCGTTCCGGC
CAATACCGGGGCAGCCGGCTCGGGCTATGTACCGGTCTCGCAACTGCAGT
CGATCATTCAGTATACCAAGACCTTCAAGAGCTTTGGCGGCGTGATGATG
TGGGATGTCACGCAGGCGTACGCCAACTCGGGCTTCTTGAGTGGCGTCCG
CAGTGCTCTGGGGCAAACGGCCTCGCGGGTTTTTGGGACTCCATACCGGT
ACCCCCTGCACTTGTGGGGCCCTGAATCCAGCACTAACTGGAAGAAATGA
ATGGGGCTGGCTTCTCTGGGAGGAGCATACGCCAAGCTCGACTTGTCTTC
CTCTAACAACGTGGTTGTGTACTGGGGCCAAAATTCCTATGCAGGAACCG
GAAGCTTGGCCCAGCAGAACCTGGGCTATTACTGCGATGACGGCAATATT
GATGCCATTGTCCTTGCGTTTGTGATGAACGTCAACGGACCTGGAGGAGC
ACCAGCATACGACTTTTCGCTCACCAGTAAAAATTGCACGCTGTTCGAAG
GCACCAACTTGCCGAATTGTCCCCAAATTGGTGCCGATATCACCACGTGC
CAGAAGAAGGGGAAGACCATCATCCTGTCAATTGGCGGTGCGACGTACAG
TGAAGGTGGATTCCAGTCGCAATCTGCTGCTCAATCCGGTGCCGACCTGA
TCTGGCAGACTTTCGGCCCCCAGCAGTCCAACTCGACGGCGCATCGGCCC
TTTGGCAACGCATCGGTGGACGGGTTTGATCTCGATTTCGAGGCTACTGT
GAATAACATGGCGCCGTTCGCGAACCGCCTTCGTCAACTGTTCGATGCCG
AGCCCTCGAAACAATACTTTCTGACGGCAGCGCCGCAGTGCCCTTACCCC
GACCTTGCCGACCAGCAGTTCCTCAACGGGCCGGTGTCAATGGATGCCGT
CTGGGTTCAGTTCTACAACAACCCTTGCGGGTTGGGCTCATTTGTTCAGG
GTCAAAGCACGCAGTCGACCTTCAACTTTGATCAGTGGGACAACTGGGCC
AAGAACGTGTCTCAGAACCCCAATGTGCGAGTGATGCTCGGCGTTCCGGC
CAATACCGGGGCAGCCGGCTCGGGCTATGTACCGGTCTCGCAACTGCAGT
CGATCATTCAGTATACCAAGACCTTCAAGAGCTTTGGCGGCGTGATGATG
TGGGATGTCACGCAGGCGTACGCCAACTCGGGCTTCTTGAGTGGCGTCCG
CAGTGCTCTGGGGCAAACGGCCTCGCGGGTTTTTGGGACTCCATACCGGT
ACCCCCTGCACTTGTGGGGCCCTGAATCCAGCACTAACTGGAAGAAATGA
ATGGGGCTGGCTTCTCTGGGAGGAGCATACGCCAAGCTCGACTTGTCTTC
CTCTAACAACGTGGTTGTGTACTGGGGCCAAAATTCCTATGCAGGAACCG
GAAGCTTGGCCCAGCAGAACCTGGGCTATTACTGCGATGACGGCAATATT
GATGCCATTGTCCTTGCGTTTGTGATGAACGTCAACGGACCTGGAGGAGC
ACCAGCATACGACTTTTCGCTCACCAGTAAAAATTGCACGCTGTTCGAAG
GCACCAACTTGCCGAATTGTCCCCAAATTGGTGCCGATATCACCACGTGC
CAGAAGAAGGGGAAGACCATCATCCTGTCAATTGGCGGTGCGACGTACAG
TGAAGGTGGATTCCAGTCGCAATCTGCTGCTCAATCCGGTGCCGACCTGA
TCTGGCAGACTTTCGGCCCCCAGCAGTCCAACTCGACGGCGCATCGGCCC
TTTGGCAACGCATCGGTGGACGGGTTTGATCTCGATTTCGAGGCTACTGT
GAATAACATGGCGCCGTTCGCGAACCGCCTTCGTCAACTGTTCGATGCCG
AGCCCTCGAAACAATACTTTCTGACGGCAGCGCCGCAGTGCCCTTACCCC
GACCTTGCCGACCAGCAGTTCCTCAACGGGCCGGTGTCAATGGATGCCGT
CTGGGTTCAGTTCTACAACAACCCTTGCGGGTTGGGCTCATTTGTTCAGG
GTCAAAGCACGCAGTCGACCTTCAACTTTGATCAGTGGGACAACTGGGCC
AAGAACGTGTCTCAGAACCCCAATGTGCGAGTGATGCTCGGCGTTCCGGC
CAATACCGGGGCAGCCGGCTCGGGCTATGTACCGGTCTCGCAACTGCAGT
CGATCATTCAGTATACCAAGACCTTCAAGAGCTTTGGCGGCGTGATGATG
TGGGATGTCACGCAGGCGTACGCCAACTCGGGCTTCTTGAGTGGCGTCCG
CAGTGCTCTGGGGCAAACGGCCTCGCGGGTTTTTGGGACTCCATACCGGT
ACCCCCTGCACTTGTGGGGCCCTGAATCCAGCACTAACTGGAAGAAATGA
ATGGGGCTGGCTTCTCTGGGAGGAGCATACGCCAAGCTCGACTTGTCTTC
CTCTAACAACGTGGTTGTGTACTGGGGCCAAAATTCCTATGCAGGAACCG
GAAGCTTGGCCCAGCAGAACCTGGGCTATTACTGCGATGACGGCAATATT
GATGCCATTGTCCTTGCGTTTGTGATGAACGTCAACGGACCTGGAGGAGC
ACCAGCATACGACTTTTCGCTCACCAGTAAAAATTGCACGCTGTTCGAAG
GCACCAACTTGCCGAATTGTCCCCAAATTGGTGCCGATATCACCACGTGC
CAGAAGAAGGGGAAGACCATCATCCTGTCAATTGGCGGTGCGACGTACAG
TGAAGGTGGATTCCAGTCGCAATCTGCTGCTCAATCCGGTGCCGACCTGA
TCTGGCAGACTTTCGGCCCCCAGCAGTCCAACTCGACGGCGCATCGGCCC
TTTGGCAACGCATCGGTGGACGGGTTTGATCTCGATTTCGAGGCTACTGT
GAATAACATGGCGCCGTTCGCGAACCGCCTTCGTCAACTGTTCGATGCCG
AGCCCTCGAAACAATACTTTCTGACGGCAGCGCCGCAGTGCCCTTACCCC
GACCTTGCCGACCAGCAGTTCCTCAACGGGCCGGTGTCAATGGATGCCGT
CTGGGTTCAGTTCTACAACAACCCTTGCGGGTTGGGCTCATTTGTTCAGG
GTCAAAGCACGCAGTCGACCTTCAACTTTGATCAGTGGGACAACTGGGCC
AAGAACGTGTCTCAGAACCCCAATGTGCGAGTGATGCTCGGCGTTCCGGC
CAATACCGGGGCAGCCGGCTCGGGCTATGTACCGGTCTCGCAACTGCAGT
CGATCATTCAGTATACCAAGACCTTCAAGAGCTTTGGCGGCGTGATGATG
TGGGATGTCACGCAGGCGTACGCCAACTCGGGCTTCTTGAGTGGCGTCCG
CAGTGCTCTGGGGCAAACGGCCTCGCGGGTTTTTGGGACTCCATACCGGT
ACCCCCTGCACTTGTGGGGCCCTGAATCCAGCACTAACTGGAAGAAATGA
ATGGGGCTGGCTTCTCTGGGAGGAGCATACGCCAAGCTCGACTTGTCTTC
CTCTAACAACGTGGTTGTGTACTGGGGCCAAAATTCCTATGCAGGAACCG
GAAGCTTGGCCCAGCAGAACCTGGGCTATTACTGCGATGACGGCAATATT
GATGCCATTGTCCTTGCGTTTGTGATGAACGTCAACGGACCTGGAGGAGC
ACCAGCATACGACTTTTCGCTCACCAGTAAAAATTGCACGCTGTTCGAAG
GCACCAACTTGCCGAATTGTCCCCAAATTGGTGCCGATATCACCACGTGC
CAGAAGAAGGGGAAGACCATCATCCTGTCAATTGGCGGTGCGACGTACAG
TGAAGGTGGATTCCAGTCGCAATCTGCTGCTCAATCCGGTGCCGACCTGA
TCTGGCAGACTTTCGGCCCCCAGCAGTCCAACTCGACGGCGCATCGGCCC
TTTGGCAACGCATCGGTGGACGGGTTTGATCTCGATTTCGAGGCTACTGT
GAATAACATGGCGCCGTTCGCGAACCGCCTTCGTCAACTGTTCGATGCCG
AGCCCTCGAAACAATACTTTCTGACGGCAGCGCCGCAGTGCCCTTACCCC
GACCTTGCCGACCAGCAGTTCCTCAACGGGCCGGTGTCAATGGATGCCGT
CTGGGTTCAGTTCTACAACAACCCTTGCGGGTTGGGCTCATTTGTTCAGG
GTCAAAGCACGCAGTCGACCTTCAACTTTGATCAGTGGGACAACTGGGCC
AAGAACGTGTCTCAGAACCCCAATGTGCGAGTGATGCTCGGCGTTCCGGC
CAATACCGGGGCAGCCGGCTCGGGCTATGTACCGGTCTCGCAACTGCAGT
CGATCATTCAGTATACCAAGACCTTCAAGAGCTTTGGCGGCGTGATGATG
TGGGATGTCACGCAGGCGTACGCCAACTCGGGCTTCTTGAGTGGCGTCCG
CAGTGCTCTGGGGCAAACGGCCTCGCGGGTTTTTGGGACTCCATACCGGT
ACCCCCTGCACTTGTGGGGCCCTGAATCCAGCACTAACTGGAAGAAATGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CBS51388_006331	CBS51388_006331	Aspergillus niger CBS 513.88	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_006331-T1	CBS51388_006331-T1-protein	Aspergillus niger CBS 513.88	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_006331-T1.exon1	CBS51388_006331-T1.exon1	Aspergillus niger CBS 513.88	exon
CBS51388_006331-T1.exon2	CBS51388_006331-T1.exon2	Aspergillus niger CBS 513.88	exon
CBS51388_006331-T1.exon3	CBS51388_006331-T1.exon3	Aspergillus niger CBS 513.88	exon
CBS51388_006331-T1.exon4	CBS51388_006331-T1.exon4	Aspergillus niger CBS 513.88	exon
CBS51388_006331-T1.exon5	CBS51388_006331-T1.exon5	Aspergillus niger CBS 513.88	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_006331-T1.cds	CBS51388_006331-T1.cds	Aspergillus niger CBS 513.88	CDS

Properties


Property Name	Value
Note	CAZy:GH18
DBxref	InterPro:IPR017853
DBxref	InterPro:IPR001579
DBxref	InterPro:IPR001223
DBxref	PFAM:PF00704
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger CBS 513.88 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
An09	supercontig	An09:1349531..1350798 +

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CBS51388_006331-T1, CBS51388_006331-T1 (mRNA) Aspergillus niger CBS 513.88