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CBS51388_006334-T1, CBS51388_006334-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006334-T1
Unique NameCBS51388_006334-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1359539..1361734-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006334-T1 ID=CBS51388_006334-T1|Name=CBS51388_006334-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2196bp|location=Sequence derived from alignment at An09:1359539..1361734- (Aspergillus niger CBS 513.88)
ATGTCGCAGTTTAAGCTTAACTTGGCCACCAAGGCCAACCAGGCCTCTTT
GCTTCCAGTCCTCCTGGTTGCCACTTCCATCAACGAGGCTCGCCCTACTC
CTGTCATCGCCATCAACTTTGAGGATGCGGCTGTCCTCTCCGAAGGCGAG
AAGGCTATCGTTCAGTTCACAGGTGCCAGCGGTGCTCCCGCCTATGGAAC
TGACAACGCCATCAAGGAGCTGCGCGCCAGCTTCCCCTTCCTCAACGGAA
AGGATGAGAAGTCTGTAAGTGATTCCCGCTTCGTCTTCATTGCGACTCTA
GGCTGATGAAGGCTTCTCTAGGAGAACGAATGGCTTTCCCAGCTCGAGTC
CTTCACCACCCTTGACTTCAAGGCTCTCGACCCTCTGCTTCAGCGCTTGA
ACACCCACCTTCTCCTCCGTTCCTTCATGGTCGGTTACTCGCTCTCCACC
CCCGACATTGCTCTGTGGGGTGCCCTTCGTGGCAACCGCGTTGCCATCTC
GGCCATCCGCAAGGGAGCCCTTGTCAACCTGACTCGTTGGTTCAACTTCC
TGGATGAGCTCTGCCCCTGGGCTAGCGCTGCTCTGGAGAGCCTCAATGCT
TCCGCCAAGGAGAAGAAGGCGGCCAAGGCCAAGGAGGGTGCCAGCTACGA
CATTGCTCTCCAGAACACTGACAAGGGTGTTGTTACCCGTTTCCCTCCTG
AGCCTTCTGGATACCTGCACATCGGACACGCCAAGGCTGCTCTGCTGAAC
GACTATTTCGCGCACGAGAAGTACAACGGCACCCTGCTGGTGCGCTTTGA
CGACACCAACCCCTCGAACGAGAAGCAGGAGTTCCAGGATGCTATCATGG
AAGACTTGGCCCTGATGGGCATCAAGCCGGACAGGATGAGCTACTCCAGT
GACTACTTTGACCAGATCTACGAGTACGGTCTGAAGATCATCCGCGAGGG
CAACGCCTACGCTGATGACACCGACAAGGAGACCATGGCTTCCCAGAGAA
TGAACGGCGAGCCCAGCAAGCGCCGTGACGCTTCCGTGGAGGAGAACCTT
GCCCGGTTCGAGGAGATGAAGCAGGGTACTCCCGAGGGTCTCAGATGGTG
CATCCGCGCCAAGATGTCCGTCGACAACCCCAACAAGGCCATGCGTGACC
CCGTCATCTACCGCTGCAACCCTACTCCTCACCACCGCACCGGTACGAAG
TGGAAGATCTACCCGACCTACGACCTGTGCTGCCCCATCTTGGACTCGAT
CGAGGGCGTTACCCACGCTCTTAGAACCATTGAGTACCGTGATCGGAACC
CTCAGTACCAGTGGTTCTTGGACACTCTCGGACTCCGCCACGTGCAGATC
TGGGATTTTGCCCGCATGAACTTCATCCGGACTCTGCTCTCGAAGCGTAA
GCTCACTAAGCTGGTCGACCAGGGCGTTGTCTGGGGCTGGGATGACCCTC
GTTTCCCGACGATCAGAGGTATTCGCAGAAGGGGTATGACTGTGCCGGCT
CTCCGCGAGTTCATTCTCAAGCAGGGACCCAGCAAGAACATCACCAACCT
GGACTGGACCCTCATCTGGGCCACCAACAAGAAGTACATTGACCCCGTTG
CGCCGCGCCACACTGCCCTCATGAAGAAGGATCTTGTCAAGGCTGTCATC
AAGGGCGCCCCTGCTCCTTACACTGAGGACAAGCCTAAGCACAACAAGAA
CCCTGAAGTTGGCCAGAAGAAGGTCACCTTCAGCGGCTCGGTTCTCTTCG
ACCAGGAGGATGCCAAGACCTTCAAGCAGGACGAGGAGATCACCCTCATG
GCCTGGGGTAATGCCATTGTCCGGAAGATTGAGAAGGACTCCGCGGGTGT
TGTGCAGTCCCTGGAGCTTGATCTGCACCTGGAGGGCGACTTCAAGAAGA
CCGAGAAGAAGGTCACCTGGCTGTCGGCTGACCAGGAACTGGTCCCCGTG
GAGCTGGTCGACTTCGACTACCTCCTCAACAAGGACTCCCTTCAGGAGGA
CGATGCTTTGGAGGACGTGCTGAACAAGAACACCGAGTTCCGTGAGGACG
CTGTGGCTGACTGCAACGTGGCCGAACTGCGTGAGGGCGACATCATCCAG
TTCGAGCGCAAGGGCTACTTCCGCTGCGACCGCCCCTACGCTCCTGGCAA
GCCGGCGGTGTTGTTCAACATCCCCACCGGCAAGACTGGCAAATAG
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Coding sequence (CDS) from alignment at An09:1359539..1361734-

>CBS51388_006334-T1 ID=CBS51388_006334-T1|Name=CBS51388_006334-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4278bp|location=Sequence derived from alignment at An09:1359539..1361734- (Aspergillus niger CBS 513.88)
GAGAACGAATGGCTTTCCCAGCTCGAGTCCTTCACCACCCTTGACTTCAA
GGCTCTCGACCCTCTGCTTCAGCGCTTGAACACCCACCTTCTCCTCCGTT
CCTTCATGGTCGGTTACTCGCTCTCCACCCCCGACATTGCTCTGTGGGGT
GCCCTTCGTGGCAACCGCGTTGCCATCTCGGCCATCCGCAAGGGAGCCCT
TGTCAACCTGACTCGTTGGTTCAACTTCCTGGATGAGCTCTGCCCCTGGG
CTAGCGCTGCTCTGGAGAGCCTCAATGCTTCCGCCAAGGAGAAGAAGGCG
GCCAAGGCCAAGGAGGGTGCCAGCTACGACATTGCTCTCCAGAACACTGA
CAAGGGTGTTGTTACCCGTTTCCCTCCTGAGCCTTCTGGATACCTGCACA
TCGGACACGCCAAGGCTGCTCTGCTGAACGACTATTTCGCGCACGAGAAG
TACAACGGCACCCTGCTGGTGCGCTTTGACGACACCAACCCCTCGAACGA
GAAGCAGGAGTTCCAGGATGCTATCATGGAAGACTTGGCCCTGATGGGCA
TCAAGCCGGACAGGATGAGCTACTCCAGTGACTACTTTGACCAGATCTAC
GAGTACGGTCTGAAGATCATCCGCGAGGGCAACGCCTACGCTGATGACAC
CGACAAGGAGACCATGGCTTCCCAGAGAATGAACGGCGAGCCCAGCAAGC
GCCGTGACGCTTCCGTGGAGGAGAACCTTGCCCGGTTCGAGGAGATGAAG
CAGGGTACTCCCGAGGGTCTCAGATGGTGCATCCGCGCCAAGATGTCCGT
CGACAACCCCAACAAGGCCATGCGTGACCCCGTCATCTACCGCTGCAACC
CTACTCCTCACCACCGCACCGGTACGAAGTGGAAGATCTACCCGACCTAC
GACCTGTGCTGCCCCATCTTGGACTCGATCGAGGGCGTTACCCACGCTCT
TAGAACCATTGAGTACCGTGATCGGAACCCTCAGTACCAGTGGTTCTTGG
ACACTCTCGGACTCCGCCACGTGCAGATCTGGGATTTTGCCCGCATGAAC
TTCATCCGGACTCTGCTCTCGAAGCGTAAGCTCACTAAGCTGGTCGACCA
GGGCGTTGTCTGGGGCTGGGATGACCCTCGTTTCCCGACGATCAGAGGTA
TTCGCAGAAGGGGTATGACTGTGCCGGCTCTCCGCGAGTTCATTCTCAAG
CAGGGACCCAGCAAGAACATCACCAACCTGGACTGGACCCTCATCTGGGC
CACCAACAAGAAGTACATTGACCCCGTTGCGCCGCGCCACACTGCCCTCA
TGAAGAAGGATCTTGTCAAGGCTGTCATCAAGGGCGCCCCTGCTCCTTAC
ACTGAGGACAAGCCTAAGCACAACAAGAACCCTGAAGTTGGCCAGAAGAA
GGTCACCTTCAGCGGCTCGGTTCTCTTCGACCAGGAGGATGCCAAGACCT
TCAAGCAGGACGAGGAGATCACCCTCATGGCCTGGGGTAATGCCATTGTC
CGGAAGATTGAGAAGGACTCCGCGGGTGTTGTGCAGTCCCTGGAGCTTGA
TCTGCACCTGGAGGGCGACTTCAAGAAGACCGAGAAGAAGGTCACCTGGC
TGTCGGCTGACCAGGAACTGGTCCCCGTGGAGCTGGTCGACTTCGACTAC
CTCCTCAACAAGGACTCCCTTCAGGAGGACGATGCTTTGGAGGACGTGCT
GAACAAGAACACCGAGTTCCGTGAGGACGCTGTGGCTGACTGCAACGTGG
CCGAACTGCGTGAGGGCGACATCATCCAGTTCGAGCGCAAGGGCTACTTC
CGCTGCGACCGCCCCTACGCTCCTGGCAAGCCGGCGGTGTTGTTCAACAT
CCCCACCGGCAAGACTGGCAAATAGATGTCGCAGTTTAAGCTTAACTTGG
CCACCAAGGCCAACCAGGCCTCTTTGCTTCCAGTCCTCCTGGTTGCCACT
TCCATCAACGAGGCTCGCCCTACTCCTGTCATCGCCATCAACTTTGAGGA
TGCGGCTGTCCTCTCCGAAGGCGAGAAGGCTATCGTTCAGTTCACAGGTG
CCAGCGGTGCTCCCGCCTATGGAACTGACAACGCCATCAAGGAGCTGCGC
GCCAGCTTCCCCTTCCTCAACGGAAAGGATGAGAAGTCTGAGAACGAATG
GCTTTCCCAGCTCGAGTCCTTCACCACCCTTGACTTCAAGGCTCTCGACC
CTCTGCTTCAGCGCTTGAACACCCACCTTCTCCTCCGTTCCTTCATGGTC
GGTTACTCGCTCTCCACCCCCGACATTGCTCTGTGGGGTGCCCTTCGTGG
CAACCGCGTTGCCATCTCGGCCATCCGCAAGGGAGCCCTTGTCAACCTGA
CTCGTTGGTTCAACTTCCTGGATGAGCTCTGCCCCTGGGCTAGCGCTGCT
CTGGAGAGCCTCAATGCTTCCGCCAAGGAGAAGAAGGCGGCCAAGGCCAA
GGAGGGTGCCAGCTACGACATTGCTCTCCAGAACACTGACAAGGGTGTTG
TTACCCGTTTCCCTCCTGAGCCTTCTGGATACCTGCACATCGGACACGCC
AAGGCTGCTCTGCTGAACGACTATTTCGCGCACGAGAAGTACAACGGCAC
CCTGCTGGTGCGCTTTGACGACACCAACCCCTCGAACGAGAAGCAGGAGT
TCCAGGATGCTATCATGGAAGACTTGGCCCTGATGGGCATCAAGCCGGAC
AGGATGAGCTACTCCAGTGACTACTTTGACCAGATCTACGAGTACGGTCT
GAAGATCATCCGCGAGGGCAACGCCTACGCTGATGACACCGACAAGGAGA
CCATGGCTTCCCAGAGAATGAACGGCGAGCCCAGCAAGCGCCGTGACGCT
TCCGTGGAGGAGAACCTTGCCCGGTTCGAGGAGATGAAGCAGGGTACTCC
CGAGGGTCTCAGATGGTGCATCCGCGCCAAGATGTCCGTCGACAACCCCA
ACAAGGCCATGCGTGACCCCGTCATCTACCGCTGCAACCCTACTCCTCAC
CACCGCACCGGTACGAAGTGGAAGATCTACCCGACCTACGACCTGTGCTG
CCCCATCTTGGACTCGATCGAGGGCGTTACCCACGCTCTTAGAACCATTG
AGTACCGTGATCGGAACCCTCAGTACCAGTGGTTCTTGGACACTCTCGGA
CTCCGCCACGTGCAGATCTGGGATTTTGCCCGCATGAACTTCATCCGGAC
TCTGCTCTCGAAGCGTAAGCTCACTAAGCTGGTCGACCAGGGCGTTGTCT
GGGGCTGGGATGACCCTCGTTTCCCGACGATCAGAGGTATTCGCAGAAGG
GGTATGACTGTGCCGGCTCTCCGCGAGTTCATTCTCAAGCAGGGACCCAG
CAAGAACATCACCAACCTGGACTGGACCCTCATCTGGGCCACCAACAAGA
AGTACATTGACCCCGTTGCGCCGCGCCACACTGCCCTCATGAAGAAGGAT
CTTGTCAAGGCTGTCATCAAGGGCGCCCCTGCTCCTTACACTGAGGACAA
GCCTAAGCACAACAAGAACCCTGAAGTTGGCCAGAAGAAGGTCACCTTCA
GCGGCTCGGTTCTCTTCGACCAGGAGGATGCCAAGACCTTCAAGCAGGAC
GAGGAGATCACCCTCATGGCCTGGGGTAATGCCATTGTCCGGAAGATTGA
GAAGGACTCCGCGGGTGTTGTGCAGTCCCTGGAGCTTGATCTGCACCTGG
AGGGCGACTTCAAGAAGACCGAGAAGAAGGTCACCTGGCTGTCGGCTGAC
CAGGAACTGGTCCCCGTGGAGCTGGTCGACTTCGACTACCTCCTCAACAA
GGACTCCCTTCAGGAGGACGATGCTTTGGAGGACGTGCTGAACAAGAACA
CCGAGTTCCGTGAGGACGCTGTGGCTGACTGCAACGTGGCCGAACTGCGT
GAGGGCGACATCATCCAGTTCGAGCGCAAGGGCTACTTCCGCTGCGACCG
CCCCTACGCTCCTGGCAAGCCGGCGGTGTTGTTCAACATCCCCACCGGCA
AGACTGGCAAATAGATGTCGCAGTTTAAGCTTAACTTGGCCACCAAGGCC
AACCAGGCCTCTTTGCTTCCAGTCCTCCTGGTTGCCACTTCCATCAACGA
GGCTCGCCCTACTCCTGTCATCGCCATCAACTTTGAGGATGCGGCTGTCC
TCTCCGAAGGCGAGAAGGCTATCGTTCAGTTCACAGGTGCCAGCGGTGCT
CCCGCCTATGGAACTGACAACGCCATCAAGGAGCTGCGCGCCAGCTTCCC
CTTCCTCAACGGAAAGGATGAGAAGTCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006424glutamyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
GO:0043039tRNA aminoacylation
Vocabulary: Molecular Function
TermDefinition
GO:0004818glutamate-tRNA ligase activity
GO:0005524ATP binding
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006334CBS51388_006334Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006334-T1CBS51388_006334-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006334-T1.cdsCBS51388_006334-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006334-T1.exon2CBS51388_006334-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006334-T1.exon1CBS51388_006334-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR011035
DBxrefInterPro:IPR001412
DBxrefInterPro:IPR004526
DBxrefInterPro:IPR014729
DBxrefInterPro:IPR020059
DBxrefInterPro:IPR020058
DBxrefInterPro:IPR020056
DBxrefInterPro:IPR000924
DBxrefPFAM:PF03950
DBxrefPFAM:PF00749
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1359539..1361734 -
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