You are here

Home

CBS51388_006335-T1, CBS51388_006335-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006335-T1
Unique NameCBS51388_006335-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1361956..1362976+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006335-T1 ID=CBS51388_006335-T1|Name=CBS51388_006335-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1021bp|location=Sequence derived from alignment at An09:1361956..1362976+ (Aspergillus niger CBS 513.88)
ATGGCTTCCTCCTACAGCTCCCTCATGCCCTCTGCGGCACGGGGAATCTT
GTCGTCATGTCGCCCTGCTCTTCGCCCGAGCCCAATTGTGCCTATTTTGC
CCAGCCTGCAACAGGTGCGCACCGCTGCCCAGGCGCGCAAGATGAAGGGA
GACAAGACCGCCAAGAGAAAGAAGGGTCCGAGGGAGTTCAAGCAGAAGGA
TCTCAAGGACATGCAACAGTTCGCACTGTGTGATGCCATGAGGTTTGTGT
GGTCATCGCTGTGTCTCAGTCGACTTTCCCACTGATTGCTTTGGTCTTCA
CCGCAGGTATCTCCGTGCATTCGAAGTTGGCCGCGAGCCAACCTCTTCCA
AATACGAGGTCCACGTTCGCCTGAAGACGAGGAGAGACGGTCCCGTCATT
CGCAACATGCTTCGATTCCCCCATTCAGTCCAAACCGAGTCCCGAATTTG
CGTCGTGTGCCCTCCCGGAACCCGCCATGAGAAGGAAGCTCGTGCGGCTG
GAGCAGTCTTGGTGGGTGAGCAGGAGGTCTTTGATGCCGTGAAGGCCGGC
AAGATCGAGTTCGACCGCTGTCTCTGCCACCCGGATAGTTTGGATGCTTT
GAACAAGGCTGGCCTGGGTCGGATCCTCGGTCCCAGAGGCCTGATGCCCA
GCGTCAAGACGGGTACTGTGGTCGAAGATATCGCCGTGCGTGTGGAGATG
CTGCGTGGTGGTACTGTTTACCGTGAGCGTGACGCCGTCATTCGTGTCCC
CGTTGGACAGCTTGGTTTCACCCCCGAGCAATTGCGTGACAACCTGCGCG
CAACGATCGACCAGATCAAGAAGGATGCGGCCGGTCTTAATGACCGCATA
ACCAAGGAGGTGTACGAAGTGGTAAGTCGCCGACTTGCGTTGCGCCTGCA
ATCGGCATCTTTTACTAACGTTCCTTAGGTCCTGAGCTCGACCAACGGTC
CCGGCTTCAGTCTGAATGGAGAGTTCAGGTCGGAGACCTCTCCCGAATCT
TCCGCTTTGCAGGGCGTGTAA
back to top

Coding sequence (CDS) from alignment at An09:1361956..1362976+

>CBS51388_006335-T1 ID=CBS51388_006335-T1|Name=CBS51388_006335-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2700bp|location=Sequence derived from alignment at An09:1361956..1362976+ (Aspergillus niger CBS 513.88)
ATGGCTTCCTCCTACAGCTCCCTCATGCCCTCTGCGGCACGGGGAATCTT
GTCGTCATGTCGCCCTGCTCTTCGCCCGAGCCCAATTGTGCCTATTTTGC
CCAGCCTGCAACAGGTGCGCACCGCTGCCCAGGCGCGCAAGATGAAGGGA
GACAAGACCGCCAAGAGAAAGAAGGGTCCGAGGGAGTTCAAGCAGAAGGA
TCTCAAGGACATGCAACAGTTCGCACTGTGTGATGCCATGAGGTATCTCC
GTGCATTCGAAGTTGGCCGCGAGCCAACCTCTTCCAAATACGAGGTCCAC
GTTCGCCTGAAGACGAGGAGAGACGGTCCCGTCATTCGCAACATGCTTCG
ATTCCCCCATTCAGTCCAAACCGAGTCCCGAATTTGCGTCGTGTGCCCTC
CCGGAACCCGCCATGAGAAGGAAGCTCGTGCGGCTGGAGCAGTCTTGGTG
GGTGAGCAGGAGGTCTTTGATGCCGTGAAGGCCGGCAAGATCGAGTTCGA
CCGCTGTCTCTGCCACCCGGATAGTTTGGATGCTTTGAACAAGGCTGGCC
TGGGTCGGATCCTCGGTCCCAGAGGCCTGATGCCCAGCGTCAAGACGGGT
ACTGTGGTCGAAGATATCGCCGTGCGTGTGGAGATGCTGCGTGGTGGTAC
TGTTTACCGTGAGCGTGACGCCGTCATTCGTGTCCCCGTTGGACAGCTTG
GTTTCACCCCCGAGCAATTGCGTGACAACCTGCGCGCAACGATCGACCAG
ATCAAGAAGGATGCGGCCGGTCTTAATGACCGCATAACCAAGGAGGTGTA
CGAAGTGGTCCTGAGCTCGACCAACGGTCCCGGCTTCAGTCTGAATGGAG
AGTTCAGGTCGGAGACCTCTCCCGAATCTTCCGCTTTGCAGGGCGTGTAA
ATGGCTTCCTCCTACAGCTCCCTCATGCCCTCTGCGGCACGGGGAATCTT
GTCGTCATGTCGCCCTGCTCTTCGCCCGAGCCCAATTGTGCCTATTTTGC
CCAGCCTGCAACAGGTGCGCACCGCTGCCCAGGCGCGCAAGATGAAGGGA
GACAAGACCGCCAAGAGAAAGAAGGGTCCGAGGGAGTTCAAGCAGAAGGA
TCTCAAGGACATGCAACAGTTCGCACTGTGTGATGCCATGAGGTATCTCC
GTGCATTCGAAGTTGGCCGCGAGCCAACCTCTTCCAAATACGAGGTCCAC
GTTCGCCTGAAGACGAGGAGAGACGGTCCCGTCATTCGCAACATGCTTCG
ATTCCCCCATTCAGTCCAAACCGAGTCCCGAATTTGCGTCGTGTGCCCTC
CCGGAACCCGCCATGAGAAGGAAGCTCGTGCGGCTGGAGCAGTCTTGGTG
GGTGAGCAGGAGGTCTTTGATGCCGTGAAGGCCGGCAAGATCGAGTTCGA
CCGCTGTCTCTGCCACCCGGATAGTTTGGATGCTTTGAACAAGGCTGGCC
TGGGTCGGATCCTCGGTCCCAGAGGCCTGATGCCCAGCGTCAAGACGGGT
ACTGTGGTCGAAGATATCGCCGTGCGTGTGGAGATGCTGCGTGGTGGTAC
TGTTTACCGTGAGCGTGACGCCGTCATTCGTGTCCCCGTTGGACAGCTTG
GTTTCACCCCCGAGCAATTGCGTGACAACCTGCGCGCAACGATCGACCAG
ATCAAGAAGGATGCGGCCGGTCTTAATGACCGCATAACCAAGGAGGTGTA
CGAAGTGGTCCTGAGCTCGACCAACGGTCCCGGCTTCAGTCTGAATGGAG
AGTTCAGGTCGGAGACCTCTCCCGAATCTTCCGCTTTGCAGGGCGTGTAA
ATGGCTTCCTCCTACAGCTCCCTCATGCCCTCTGCGGCACGGGGAATCTT
GTCGTCATGTCGCCCTGCTCTTCGCCCGAGCCCAATTGTGCCTATTTTGC
CCAGCCTGCAACAGGTGCGCACCGCTGCCCAGGCGCGCAAGATGAAGGGA
GACAAGACCGCCAAGAGAAAGAAGGGTCCGAGGGAGTTCAAGCAGAAGGA
TCTCAAGGACATGCAACAGTTCGCACTGTGTGATGCCATGAGGTATCTCC
GTGCATTCGAAGTTGGCCGCGAGCCAACCTCTTCCAAATACGAGGTCCAC
GTTCGCCTGAAGACGAGGAGAGACGGTCCCGTCATTCGCAACATGCTTCG
ATTCCCCCATTCAGTCCAAACCGAGTCCCGAATTTGCGTCGTGTGCCCTC
CCGGAACCCGCCATGAGAAGGAAGCTCGTGCGGCTGGAGCAGTCTTGGTG
GGTGAGCAGGAGGTCTTTGATGCCGTGAAGGCCGGCAAGATCGAGTTCGA
CCGCTGTCTCTGCCACCCGGATAGTTTGGATGCTTTGAACAAGGCTGGCC
TGGGTCGGATCCTCGGTCCCAGAGGCCTGATGCCCAGCGTCAAGACGGGT
ACTGTGGTCGAAGATATCGCCGTGCGTGTGGAGATGCTGCGTGGTGGTAC
TGTTTACCGTGAGCGTGACGCCGTCATTCGTGTCCCCGTTGGACAGCTTG
GTTTCACCCCCGAGCAATTGCGTGACAACCTGCGCGCAACGATCGACCAG
ATCAAGAAGGATGCGGCCGGTCTTAATGACCGCATAACCAAGGAGGTGTA
CGAAGTGGTCCTGAGCTCGACCAACGGTCCCGGCTTCAGTCTGAATGGAG
AGTTCAGGTCGGAGACCTCTCCCGAATCTTCCGCTTTGCAGGGCGTGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006335CBS51388_006335Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006335-T1.exon1CBS51388_006335-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006335-T1.exon2CBS51388_006335-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006335-T1.exon3CBS51388_006335-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006335-T1.cdsCBS51388_006335-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006335-T1CBS51388_006335-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092643Y5
DBxrefInterPro:IPR023674
DBxrefInterPro:IPR028364
DBxrefInterPro:IPR016095
DBxrefPFAM:PF00687
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1361956..1362976 +
Powered by Drupal