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CBS51388_006342-T1, CBS51388_006342-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006342-T1
Unique NameCBS51388_006342-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1377830..1378935-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006342-T1 ID=CBS51388_006342-T1|Name=CBS51388_006342-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1106bp|location=Sequence derived from alignment at An09:1377830..1378935- (Aspergillus niger CBS 513.88)
ATGTCCTCACCACCACCACCGTCCTCAAACCCCCTCAAACGCCCCTCCAT
CTCCTCGGCCTCCTCTCAACCACTCGGCAGCCATCCCAAGCGACCGCGCA
TGCACCCCCTCCGCCAGACCTCCTTCCCGAACACCATCGACGCAGACACG
CGCACCTACAGCGATGCCGGCAGCGTGACGGGCAGCTTTACAGGCAGTCT
GGGCGGGACCAGCGCAGATGGGGTGTTCCTAACGAAGGGAAAGAAGCGCG
GCAGGAAGAGTAAAGCGGAGAAGGAGCGCGAGAGGGAAGAAGGGAGTTTG
CGGGCGGGAATGGATCGACTGGGGTCGGTGGATGTGGATGGCGCGTCAGT
GAGGGGTGGTGCTTCTGGCGGTGCCGGAGGAGGAGGGGGAGGAGAAGATG
CAGATGAGGATGAGGATTTTGATGATGAGGGGGAGTTGTTGGGGAGGGAA
GAGGGGACGACGGATACGGAGGCGGAGAAGAAGAATATGGCGTATGCATC
CCTCCTTTTGGACGACTCTATATCTGGCTTGTGGGCGAAGTTGCTAACTG
GTTCTGGTGTAGGTTGTTGGTGGATGCATTCAATCCCATCCAGTCGGAGC
GATATGACCTGTTCAAACGAGCCAAATTACGAAAGGAGACGCTACGACGT
ATTGTCAATCATGCGCTGTCGCAGTCTGTGCCGGCTAGTGTGGTTACAAC
GATTAATGGCTTTACGAAGGTGTTTGCGGGTGAGATTATTGAGAAGGCTC
GTACCGTGCAGGCGGAGTGGGCTATCGCTCATGATCAGGCGGCTTTGGCT
GCAATTGAAGCTGAACAGGCGACGACAACAACAACGACAACCACAACACC
TGGGGGTATTAAGCAGGAGCCCATGGAAAGGGGGCCCATGTCTACGCCTA
TGGGGAAGAAGGATGTTAAGCTGCCTCCGAATCCCCATCGGGGCCAGTTG
CTGCCCTCGCATCTAAGAGAAGCGCTGCGGCGGTATAAGCGGGATGGAGA
GGGTGGAGGCGTAGGGTTCTCGGGTCTGAGTATGGGCAATCTGGGGGTGC
GAGGGTCGGTGACTTGGTCGGCGGGTAGTGTTGNCGGACGGCGCATCTTC
CGGTAA
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Coding sequence (CDS) from alignment at An09:1377830..1378935-

>CBS51388_006342-T1 ID=CBS51388_006342-T1|Name=CBS51388_006342-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2070bp|location=Sequence derived from alignment at An09:1377830..1378935- (Aspergillus niger CBS 513.88)
GTTGTTGGTGGATGCATTCAATCCCATCCAGTCGGAGCGATATGACCTGT
TCAAACGAGCCAAATTACGAAAGGAGACGCTACGACGTATTGTCAATCAT
GCGCTGTCGCAGTCTGTGCCGGCTAGTGTGGTTACAACGATTAATGGCTT
TACGAAGGTGTTTGCGGGTGAGATTATTGAGAAGGCTCGTACCGTGCAGG
CGGAGTGGGCTATCGCTCATGATCAGGCGGCTTTGGCTGCAATTGAAGCT
GAACAGGCGACGACAACAACAACGACAACCACAACACCTGGGGGTATTAA
GCAGGAGCCCATGGAAAGGGGGCCCATGTCTACGCCTATGGGGAAGAAGG
ATGTTAAGCTGCCTCCGAATCCCCATCGGGGCCAGTTGCTGCCCTCGCAT
CTAAGAGAAGCGCTGCGGCGGTATAAGCGGGATGGAGAGGGTGGAGGCGT
AGGGTTCTCGGGTCTGAGTATGGGCAATCTGGGGGTGCGAGGGTCGGTGA
CTTGGTCGGCGGGTAGTGTTGNCGGACGGCGCATCTTCCGGTAAATGTCC
TCACCACCACCACCGTCCTCAAACCCCCTCAAACGCCCCTCCATCTCCTC
GGCCTCCTCTCAACCACTCGGCAGCCATCCCAAGCGACCGCGCATGCACC
CCCTCCGCCAGACCTCCTTCCCGAACACCATCGACGCAGACACGCGCACC
TACAGCGATGCCGGCAGCGTGACGGGCAGCTTTACAGGCAGTCTGGGCGG
GACCAGCGCAGATGGGGTGTTCCTAACGAAGGGAAAGAAGCGCGGCAGGA
AGAGTAAAGCGGAGAAGGAGCGCGAGAGGGAAGAAGGGAGTTTGCGGGCG
GGAATGGATCGACTGGGGTCGGTGGATGTGGATGGCGCGTCAGTGAGGGG
TGGTGCTTCTGGCGGTGCCGGAGGAGGAGGGGGAGGAGAAGATGCAGATG
AGGATGAGGATTTTGATGATGAGGGGGAGTTGTTGGGGAGGGAAGAGGGG
ACGACGGATACGGAGGCGGAGAAGAAGAATATGGCGTTGTTGGTGGATGC
ATTCAATCCCATCCAGTCGGAGCGATATGACCTGTTCAAACGAGCCAAAT
TACGAAAGGAGACGCTACGACGTATTGTCAATCATGCGCTGTCGCAGTCT
GTGCCGGCTAGTGTGGTTACAACGATTAATGGCTTTACGAAGGTGTTTGC
GGGTGAGATTATTGAGAAGGCTCGTACCGTGCAGGCGGAGTGGGCTATCG
CTCATGATCAGGCGGCTTTGGCTGCAATTGAAGCTGAACAGGCGACGACA
ACAACAACGACAACCACAACACCTGGGGGTATTAAGCAGGAGCCCATGGA
AAGGGGGCCCATGTCTACGCCTATGGGGAAGAAGGATGTTAAGCTGCCTC
CGAATCCCCATCGGGGCCAGTTGCTGCCCTCGCATCTAAGAGAAGCGCTG
CGGCGGTATAAGCGGGATGGAGAGGGTGGAGGCGTAGGGTTCTCGGGTCT
GAGTATGGGCAATCTGGGGGTGCGAGGGTCGGTGACTTGGTCGGCGGGTA
GTGTTGNCGGACGGCGCATCTTCCGGTAAATGTCCTCACCACCACCACCG
TCCTCAAACCCCCTCAAACGCCCCTCCATCTCCTCGGCCTCCTCTCAACC
ACTCGGCAGCCATCCCAAGCGACCGCGCATGCACCCCCTCCGCCAGACCT
CCTTCCCGAACACCATCGACGCAGACACGCGCACCTACAGCGATGCCGGC
AGCGTGACGGGCAGCTTTACAGGCAGTCTGGGCGGGACCAGCGCAGATGG
GGTGTTCCTAACGAAGGGAAAGAAGCGCGGCAGGAAGAGTAAAGCGGAGA
AGGAGCGCGAGAGGGAAGAAGGGAGTTTGCGGGCGGGAATGGATCGACTG
GGGTCGGTGGATGTGGATGGCGCGTCAGTGAGGGGTGGTGCTTCTGGCGG
TGCCGGAGGAGGAGGGGGAGGAGAAGATGCAGATGAGGATGAGGATTTTG
ATGATGAGGGGGAGTTGTTGGGGAGGGAAGAGGGGACGACGGATACGGAG
GCGGAGAAGAAGAATATGGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation from RNA polymerase II promoter
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006342CBS51388_006342Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006342-T1CBS51388_006342-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006342-T1.cdsCBS51388_006342-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006342-T1.exon2CBS51388_006342-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006342-T1.exon1CBS51388_006342-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteantiSMASH:Cluster_9.9
NoteBUSCO:EOG09264VRO
DBxrefInterPro:IPR006809
DBxrefInterPro:IPR009072
DBxrefPFAM:PF04719
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1377830..1378935 -
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