You are here

Home

CBS51388_006357-T1, CBS51388_006357-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006357-T1
Unique NameCBS51388_006357-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1413958..1415680-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006357-T1 ID=CBS51388_006357-T1|Name=CBS51388_006357-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1723bp|location=Sequence derived from alignment at An09:1413958..1415680- (Aspergillus niger CBS 513.88)
ATGGTCACTATCACCGCCAAATCTGAGGCAGCTTCTGCTACTTCCCCTAT
TTCTTCCAATACTATCACTACTACCCTCAACGGGGTAGGCGATCCCAAAA
ATAAAGAAAAAGATCTTCAACTTCAAGAAAAAGAAGGAGAAGAAGAAGAA
ATATCCAAAGAAACCAAAGCATACAACTCCTCCAACGGCGTAACCAGCCA
ACTCTGCACCTGGATCGCCTCCCTCCAGCTGGACGACATCCCAGACTCTG
TCCGCACCCGCGCTAAATACCTCTTCCTCGATGGCATTGCCTGTGCCCTC
GTTGGTGCGCGCGTCCCATGGTCGCAGAAAGCATTTGACGCGATGACTGC
CTTCGAGGAGAGGGGGAAGCATGTGGTCATTGGGTATGAAGAGGTATTTC
TCCCTCCTACCTATATAATCTTTTCATCCATGCTATTACATGGATGAATG
GATAGAGTTAGGATTATAAAGGTACTAATGGATTTGGCAGCGCCTCGGTG
CCATCGCCGCCGCAACCCTCAACGGCTCCTGGATCCAAGCCTGCGAAGTA
GACGACTACCACAGCGTGGCGCCTTTGCACTCCCAAGCCGTGGTCATCCC
TCCTCTCTTCGCGGCAGCCGTCGGTGCGCGGGACCATCCGACCACCCCGC
GCATCATCGACGGACGAACACTTCTTCTTGCCTCGGTGGTGGGGTTCGAG
ATTGGTCCCCGCGTCGGCATGGCGCTGCACGGTACCGAGATGCTCGCGAA
GGGATGGCACTGCGGTTCTGTTTTTGGTGCACCAGCGGCTGCAGGTAGTT
CCGCGAAACTCCTCGGTTTGTCAGCGGGTCAAATCGAAGACGCGATCGGA
GTAGCAGCGACGCAGGCATGCGGGCTCATGGCGGCGCAGTACGACGGGAT
GGTGAAGCGGATGCATCACGGGTTCGCGGCGCGGAATGGACTGTTGGGAA
CGATGTTGGCGTGGGGAGGATACGAAGGGATCAAGAAGGTGTTTGAGCGG
CCGTATGGAGGGTTTCTGGCAATGTTTGGACTGGGGTCGAAGAATACGCC
TAGTTCGAAGCCAGAGGAGGTGGCGAAGGATTTGGGGACGTTTTGGCATA
CGGCGGAATGGATTCGGTTGAAGTTGCATGCGTGCTGTGGGGGGATTCAC
GGCACGATTGAGTGTTTGGCGGAGATGCAGGAGATGTATCCGGAACGACT
TGGACGGGAGAAATTAGGAGAGATCAAGGAGATTCGGATTCAATTGAGTG
ATGCGGTGTTTCATCACTGTGGATGGGCGCCGGAGACGAGGCCGCTGACG
CCGACGGGGGCGCAGATGAATACGGCGTTTGTGGCGGCGTCACAGCTGGT
GGATGGACAGGTGTTGTTGGAGCAATTTTCGTCGGGGAAGCTGGATCGGG
ATGAGATTTGGGAGTTGATCGGAAAGACGAGTTGTGTGCATACGACGGAG
TTGGATCAGCCGAATATTGGGTGCGGTGCGTTGATTTCGATCGCGTTTGC
GGATGGTAGTCAGGTTCAGCATTCGTTGTTGAAGCCGAAGGGGGTGGACG
AACCGATTTCGAATGAGGAGATCTTGGAGAAGTTTCGTCGCTTGACAGGA
GGGTTGATCGGGGTGGAGAGGCAGGAGAAGATTGAAAGAGCTGTGCTGGG
GATGGAGGAGTTGCAGGATGTGAACGAGTTGATTGAGTTGTTGAGTGTGA
ATGTGGTCAATCCGTTGCAGTAG
back to top

Coding sequence (CDS) from alignment at An09:1413958..1415680-

>CBS51388_006357-T1 ID=CBS51388_006357-T1|Name=CBS51388_006357-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3252bp|location=Sequence derived from alignment at An09:1413958..1415680- (Aspergillus niger CBS 513.88)
CGCCTCGGTGCCATCGCCGCCGCAACCCTCAACGGCTCCTGGATCCAAGC
CTGCGAAGTAGACGACTACCACAGCGTGGCGCCTTTGCACTCCCAAGCCG
TGGTCATCCCTCCTCTCTTCGCGGCAGCCGTCGGTGCGCGGGACCATCCG
ACCACCCCGCGCATCATCGACGGACGAACACTTCTTCTTGCCTCGGTGGT
GGGGTTCGAGATTGGTCCCCGCGTCGGCATGGCGCTGCACGGTACCGAGA
TGCTCGCGAAGGGATGGCACTGCGGTTCTGTTTTTGGTGCACCAGCGGCT
GCAGGTAGTTCCGCGAAACTCCTCGGTTTGTCAGCGGGTCAAATCGAAGA
CGCGATCGGAGTAGCAGCGACGCAGGCATGCGGGCTCATGGCGGCGCAGT
ACGACGGGATGGTGAAGCGGATGCATCACGGGTTCGCGGCGCGGAATGGA
CTGTTGGGAACGATGTTGGCGTGGGGAGGATACGAAGGGATCAAGAAGGT
GTTTGAGCGGCCGTATGGAGGGTTTCTGGCAATGTTTGGACTGGGGTCGA
AGAATACGCCTAGTTCGAAGCCAGAGGAGGTGGCGAAGGATTTGGGGACG
TTTTGGCATACGGCGGAATGGATTCGGTTGAAGTTGCATGCGTGCTGTGG
GGGGATTCACGGCACGATTGAGTGTTTGGCGGAGATGCAGGAGATGTATC
CGGAACGACTTGGACGGGAGAAATTAGGAGAGATCAAGGAGATTCGGATT
CAATTGAGTGATGCGGTGTTTCATCACTGTGGATGGGCGCCGGAGACGAG
GCCGCTGACGCCGACGGGGGCGCAGATGAATACGGCGTTTGTGGCGGCGT
CACAGCTGGTGGATGGACAGGTGTTGTTGGAGCAATTTTCGTCGGGGAAG
CTGGATCGGGATGAGATTTGGGAGTTGATCGGAAAGACGAGTTGTGTGCA
TACGACGGAGTTGGATCAGCCGAATATTGGGTGCGGTGCGTTGATTTCGA
TCGCGTTTGCGGATGGTAGTCAGGTTCAGCATTCGTTGTTGAAGCCGAAG
GGGGTGGACGAACCGATTTCGAATGAGGAGATCTTGGAGAAGTTTCGTCG
CTTGACAGGAGGGTTGATCGGGGTGGAGAGGCAGGAGAAGATTGAAAGAG
CTGTGCTGGGGATGGAGGAGTTGCAGGATGTGAACGAGTTGATTGAGTTG
TTGAGTGTGAATGTGGTCAATCCGTTGCAGTAGATGGTCACTATCACCGC
CAAATCTGAGGCAGCTTCTGCTACTTCCCCTATTTCTTCCAATACTATCA
CTACTACCCTCAACGGGGTAGGCGATCCCAAAAATAAAGAAAAAGATCTT
CAACTTCAAGAAAAAGAAGGAGAAGAAGAAGAAATATCCAAAGAAACCAA
AGCATACAACTCCTCCAACGGCGTAACCAGCCAACTCTGCACCTGGATCG
CCTCCCTCCAGCTGGACGACATCCCAGACTCTGTCCGCACCCGCGCTAAA
TACCTCTTCCTCGATGGCATTGCCTGTGCCCTCGTTGGTGCGCGCGTCCC
ATGGTCGCAGAAAGCATTTGACGCGATGACTGCCTTCGAGGAGAGGGGGA
AGCATGTGGTCATTGGGTATGAAGAGCGCCTCGGTGCCATCGCCGCCGCA
ACCCTCAACGGCTCCTGGATCCAAGCCTGCGAAGTAGACGACTACCACAG
CGTGGCGCCTTTGCACTCCCAAGCCGTGGTCATCCCTCCTCTCTTCGCGG
CAGCCGTCGGTGCGCGGGACCATCCGACCACCCCGCGCATCATCGACGGA
CGAACACTTCTTCTTGCCTCGGTGGTGGGGTTCGAGATTGGTCCCCGCGT
CGGCATGGCGCTGCACGGTACCGAGATGCTCGCGAAGGGATGGCACTGCG
GTTCTGTTTTTGGTGCACCAGCGGCTGCAGGTAGTTCCGCGAAACTCCTC
GGTTTGTCAGCGGGTCAAATCGAAGACGCGATCGGAGTAGCAGCGACGCA
GGCATGCGGGCTCATGGCGGCGCAGTACGACGGGATGGTGAAGCGGATGC
ATCACGGGTTCGCGGCGCGGAATGGACTGTTGGGAACGATGTTGGCGTGG
GGAGGATACGAAGGGATCAAGAAGGTGTTTGAGCGGCCGTATGGAGGGTT
TCTGGCAATGTTTGGACTGGGGTCGAAGAATACGCCTAGTTCGAAGCCAG
AGGAGGTGGCGAAGGATTTGGGGACGTTTTGGCATACGGCGGAATGGATT
CGGTTGAAGTTGCATGCGTGCTGTGGGGGGATTCACGGCACGATTGAGTG
TTTGGCGGAGATGCAGGAGATGTATCCGGAACGACTTGGACGGGAGAAAT
TAGGAGAGATCAAGGAGATTCGGATTCAATTGAGTGATGCGGTGTTTCAT
CACTGTGGATGGGCGCCGGAGACGAGGCCGCTGACGCCGACGGGGGCGCA
GATGAATACGGCGTTTGTGGCGGCGTCACAGCTGGTGGATGGACAGGTGT
TGTTGGAGCAATTTTCGTCGGGGAAGCTGGATCGGGATGAGATTTGGGAG
TTGATCGGAAAGACGAGTTGTGTGCATACGACGGAGTTGGATCAGCCGAA
TATTGGGTGCGGTGCGTTGATTTCGATCGCGTTTGCGGATGGTAGTCAGG
TTCAGCATTCGTTGTTGAAGCCGAAGGGGGTGGACGAACCGATTTCGAAT
GAGGAGATCTTGGAGAAGTTTCGTCGCTTGACAGGAGGGTTGATCGGGGT
GGAGAGGCAGGAGAAGATTGAAAGAGCTGTGCTGGGGATGGAGGAGTTGC
AGGATGTGAACGAGTTGATTGAGTTGTTGAGTGTGAATGTGGTCAATCCG
TTGCAGTAGATGGTCACTATCACCGCCAAATCTGAGGCAGCTTCTGCTAC
TTCCCCTATTTCTTCCAATACTATCACTACTACCCTCAACGGGGTAGGCG
ATCCCAAAAATAAAGAAAAAGATCTTCAACTTCAAGAAAAAGAAGGAGAA
GAAGAAGAAATATCCAAAGAAACCAAAGCATACAACTCCTCCAACGGCGT
AACCAGCCAACTCTGCACCTGGATCGCCTCCCTCCAGCTGGACGACATCC
CAGACTCTGTCCGCACCCGCGCTAAATACCTCTTCCTCGATGGCATTGCC
TGTGCCCTCGTTGGTGCGCGCGTCCCATGGTCGCAGAAAGCATTTGACGC
GATGACTGCCTTCGAGGAGAGGGGGAAGCATGTGGTCATTGGGTATGAAG
AG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006357CBS51388_006357Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006357-T1CBS51388_006357-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006357-T1.cdsCBS51388_006357-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006357-T1.exon2CBS51388_006357-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006357-T1.exon1CBS51388_006357-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR042183
DBxrefInterPro:IPR005656
DBxrefPFAM:PF03972
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1413958..1415680 -
Powered by Drupal