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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:1432947..1433690+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006365-T1 ID=CBS51388_006365-T1|Name=CBS51388_006365-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=744bp|location=Sequence derived from alignment at An09:1432947..1433690+ (Aspergillus niger CBS 513.88)
ATGTCGTTCTGGAAAGAAGCGTGCTTGAACCTGCGTCATGCCGTCCCCAA
GTCCGGGAACAGCATCGGTCGCGCCCAATCCAAGAGATTCCTCACTTCTT
CTTACTCGACTCAGACGCCGCGAGTGATTGCCTCAAGTCGACTCCCCATC
AATGCCCGGAGGGACTTCCTGAACCAACAGTCATGGATGGCTCGTCGCAG
CTTTTCCGTCACGGCCTGTGCTCAGCACGGCCATATCACGCCGCCAAAGC
CCGGGGAGGAGTGAGTCATTGCGGACGCTGGCTTCGTATACTACCCATGC
TGATTTTTGATGCGCAGGATCAACGTGACTTTCATCGACAAGGACGGCGT
GAAGATTGAACTGCAGGTCTCCGAGGGTGACAACCTGCTAGACATCGCAC
AGGCAAATGACATCGAGATGGAAGGTGCGTAATGCCAGTTATCGGGAGAT
ACGCGGAATGCTAGGGCTACCGTGACTAACGGACGCTGGAATACTTTAGG
TGCCTGTGGTGGTTCTTGCGCCTGCTCGACTTGCCATGTGATCGTCGAGG
ACCCGGACATGTTCGACAAGATGGAAGAGCCGTCGGACGACGAGAACGAC
ATGCTGGATCTGGCGTTCGGTCTGACAGAGACCTCCCGGTTGGGTTGTCA
AGTGGCCATGAGCAAGGACCTCGATGGCCTCGTGGTCCGGCTGCCGTCGA
TGACTCGGAACTTGCAGGCAAGCGACTTCGAGCCCAAGAAATGA back to topCoding sequence (CDS) from alignment at An09:1432947..1433690+ >CBS51388_006365-T1 ID=CBS51388_006365-T1|Name=CBS51388_006365-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1836bp|location=Sequence derived from alignment at An09:1432947..1433690+ (Aspergillus niger CBS 513.88)
ATGTCGTTCTGGAAAGAAGCGTGCTTGAACCTGCGTCATGCCGTCCCCAA
GTCCGGGAACAGCATCGGTCGCGCCCAATCCAAGAGATTCCTCACTTCTT
CTTACTCGACTCAGACGCCGCGAGTGATTGCCTCAAGTCGACTCCCCATC
AATGCCCGGAGGGACTTCCTGAACCAACAGTCATGGATGGCTCGTCGCAG
CTTTTCCGTCACGGCCTGTGCTCAGCACGGCCATATCACGCCGCCAAAGC
CCGGGGAGGAGATCAACGTGACTTTCATCGACAAGGACGGCGTGAAGATT
GAACTGCAGGTCTCCGAGGGTGACAACCTGCTAGACATCGCACAGGCAAA
TGACATCGAGATGGAAGGTGCCTGTGGTGGTTCTTGCGCCTGCTCGACTT
GCCATGTGATCGTCGAGGACCCGGACATGTTCGACAAGATGGAAGAGCCG
TCGGACGACGAGAACGACATGCTGGATCTGGCGTTCGGTCTGACAGAGAC
CTCCCGGTTGGGTTGTCAAGTGGCCATGAGCAAGGACCTCGATGGCCTCG
TGGTCCGGCTGCCGTCGATGACTCGGAACTTGCAGGCAAGCGACTTCGAG
CCCAAGAAATGAATGTCGTTCTGGAAAGAAGCGTGCTTGAACCTGCGTCA
TGCCGTCCCCAAGTCCGGGAACAGCATCGGTCGCGCCCAATCCAAGAGAT
TCCTCACTTCTTCTTACTCGACTCAGACGCCGCGAGTGATTGCCTCAAGT
CGACTCCCCATCAATGCCCGGAGGGACTTCCTGAACCAACAGTCATGGAT
GGCTCGTCGCAGCTTTTCCGTCACGGCCTGTGCTCAGCACGGCCATATCA
CGCCGCCAAAGCCCGGGGAGGAGATCAACGTGACTTTCATCGACAAGGAC
GGCGTGAAGATTGAACTGCAGGTCTCCGAGGGTGACAACCTGCTAGACAT
CGCACAGGCAAATGACATCGAGATGGAAGGTGCCTGTGGTGGTTCTTGCG
CCTGCTCGACTTGCCATGTGATCGTCGAGGACCCGGACATGTTCGACAAG
ATGGAAGAGCCGTCGGACGACGAGAACGACATGCTGGATCTGGCGTTCGG
TCTGACAGAGACCTCCCGGTTGGGTTGTCAAGTGGCCATGAGCAAGGACC
TCGATGGCCTCGTGGTCCGGCTGCCGTCGATGACTCGGAACTTGCAGGCA
AGCGACTTCGAGCCCAAGAAATGAATGTCGTTCTGGAAAGAAGCGTGCTT
GAACCTGCGTCATGCCGTCCCCAAGTCCGGGAACAGCATCGGTCGCGCCC
AATCCAAGAGATTCCTCACTTCTTCTTACTCGACTCAGACGCCGCGAGTG
ATTGCCTCAAGTCGACTCCCCATCAATGCCCGGAGGGACTTCCTGAACCA
ACAGTCATGGATGGCTCGTCGCAGCTTTTCCGTCACGGCCTGTGCTCAGC
ACGGCCATATCACGCCGCCAAAGCCCGGGGAGGAGATCAACGTGACTTTC
ATCGACAAGGACGGCGTGAAGATTGAACTGCAGGTCTCCGAGGGTGACAA
CCTGCTAGACATCGCACAGGCAAATGACATCGAGATGGAAGGTGCCTGTG
GTGGTTCTTGCGCCTGCTCGACTTGCCATGTGATCGTCGAGGACCCGGAC
ATGTTCGACAAGATGGAAGAGCCGTCGGACGACGAGAACGACATGCTGGA
TCTGGCGTTCGGTCTGACAGAGACCTCCCGGTTGGGTTGTCAAGTGGCCA
TGAGCAAGGACCTCGATGGCCTCGTGGTCCGGCTGCCGTCGATGACTCGG
AACTTGCAGGCAAGCGACTTCGAGCCCAAGAAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051536 | iron-sulfur cluster binding |
| GO:0051537 | 2 iron, 2 sulfur cluster binding |
| GO:0009055 | electron transfer activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036010 |
| DBxref | InterPro:IPR018298 |
| DBxref | InterPro:IPR012675 |
| DBxref | InterPro:IPR001041 |
| DBxref | InterPro:IPR001055 |
| DBxref | PFAM:PF00111 |
| Product | mitochondrial matrix iron-sulfur protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:1432947..1433690 + |
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