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CBS51388_006400-T1, CBS51388_006400-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006400-T1
Unique NameCBS51388_006400-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1545778..1547567+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006400-T1 ID=CBS51388_006400-T1|Name=CBS51388_006400-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1790bp|location=Sequence derived from alignment at An09:1545778..1547567+ (Aspergillus niger CBS 513.88)
ATGGCTTTCGGGAACAAGGTCAAATCCACGTCTGCCGAGGGGGAAAAGGG
CAAGATGGCGCCTGAAGAGACTGTCCAGGTTCAGCCCACGAACCCTTCGT
CCGACTTGAACGACATCGATTGTGAGAAACATGGCGCCAGTCGCGAGTCA
AATCCCATGCCCGATCTCAAGCGGAAGCTGAGAAGTCGCCATCTTCAGAT
GATTGCCATTGGTGAGTCCTGCTGGCTGTCTTGAGTTCTTTCCCTTTCTT
CTTCTGCCGTAAGACAGGCGGCCATTCCGCAAGTGACAACCTGCTCATTC
AATTCATAGGTGGTACTATTGGCACTGGTCTGTTCATCGGTAGTGGTACT
GCTGTCGCCAACGGAGGTCCTGTTGGTGCCCTCATTGCCTACATCTTCGT
CGGTACGATCGTCTACTCGGTTATGACCTCCCTGGGTGAAATAGCGACCT
ATATTCCGATTCCTGGAGCGTTCACAGCCTACGCTGCTCGTCTGGTGGAC
CCCAGTCTTGGCTTCGCCATGGGGTGGATCTATTGGTTTTCCTGGGCTAG
TACATTTGCACTCGAGTTAACGGCAACCGGTCTGATCATTCAATTCTGGG
ACGACTCCATCAATATCGCTATCTTCATCGCCATCTTTTGGGTTCTGATA
GCTCTATTGAATTTCCTGCCTGTCAGCTTCTATGGTGAATTGGAATTCTG
GCTTTCAAGTATCAAAGTTATCACCGTTGTTGGGTTCATGATCTTCGCCA
TCTGCATTGACGCCGGCGTCGGTGACAAAGGGTATCTCGGATTTCGCTAT
TGGGTCGACCCAGGCCCCTTTGCTCCTTATTCGGGTGTCCACCCCGACTC
GACAGCAAAGTTCGTCGGTTTCTGGTCCGTTCTTATCCAGGCTGGCTTTT
CGTATCAGGGAACGGAACTGGTCGGTATCGCAGCCGCTGAGACAGAAAAC
CCTCGCAAAACGGTGCCTGCGGCTATTCGCAAGACCTTCTACCGCATTCT
GTTCTTCTTCGTCCTGACCATCTTCTTCATCGGTCTTCTGGTGCCCTACA
CCAACGAGAACCTCCTGACCGATGGAAACGATGCTAACTCGTCGCCTTTT
GTCATTGCGGCTAGGCTTGCTGGAGTTAAGGTTCTGCCTCACATTATCAA
CGCAGTCCTGCTGACTGTGGTGCTCTCTGCTGCCAATTCAAATGTTTACA
GTGGCAGTCGTATCTTGCTTGGTCTGGCTCAAGAAGGGTTTGCCCCGCGC
TGGTTCAAGAAGACTTCTAAGAAGGGTGTGCCATACTTCAGCGTTGCCTT
CACGGCAGCCTTCGGTCTTCTCGGTTTCATGAATGTCTCCAATGCAGGTA
GCACTGTGTTCAACTGGCTCGTCAACATCGCCGGTGTCGCAGGCTTCATC
ACTTGGGCATCGTTGAACGGCTGCCATCTTGCTTTCATGCGTGCCCTGAA
GGCTCGCGACATCTCCCGTGACACCCTTCCTTATAAAGCTATCTGGCAGC
CCTACTATTCCTGGTACGGGTTGTTCTTCAACATCCTCATTATCATCACG
CAAGGTTTCACCTCCTTTATTACCAGCTTCAGCGTCACGGATTTCTTCAT
TGATTACATCAGTCTGATTCTCTTCGTCGTGCTCTATGTTGGCCACAAGA
TCTACTTCCGGACATCTTTTGTCCATCCTCTTGAGGCTGATATTGATACG
GGCCGCCAGGAGGTCGAGAACGAAACGTGGGAAACGGAGGCTCCCGCCAC
GAAATGGCACCAGAAGCTTGCACGCTCATTCCTGGGCTGA
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Coding sequence (CDS) from alignment at An09:1545778..1547567+

>CBS51388_006400-T1 ID=CBS51388_006400-T1|Name=CBS51388_006400-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3384bp|location=Sequence derived from alignment at An09:1545778..1547567+ (Aspergillus niger CBS 513.88)
ATGGCTTTCGGGAACAAGGTCAAATCCACGTCTGCCGAGGGGGAAAAGGG
CAAGATGGCGCCTGAAGAGACTGTCCAGGTTCAGCCCACGAACCCTTCGT
CCGACTTGAACGACATCGATTGTGAGAAACATGGCGCCAGTCGCGAGTCA
AATCCCATGCCCGATCTCAAGCGGAAGCTGAGAAGTCGCCATCTTCAGAT
GATTGCCATTGGTGGTACTATTGGCACTGGTCTGTTCATCGGTAGTGGTA
CTGCTGTCGCCAACGGAGGTCCTGTTGGTGCCCTCATTGCCTACATCTTC
GTCGGTACGATCGTCTACTCGGTTATGACCTCCCTGGGTGAAATAGCGAC
CTATATTCCGATTCCTGGAGCGTTCACAGCCTACGCTGCTCGTCTGGTGG
ACCCCAGTCTTGGCTTCGCCATGGGGTGGATCTATTGGTTTTCCTGGGCT
AGTACATTTGCACTCGAGTTAACGGCAACCGGTCTGATCATTCAATTCTG
GGACGACTCCATCAATATCGCTATCTTCATCGCCATCTTTTGGGTTCTGA
TAGCTCTATTGAATTTCCTGCCTGTCAGCTTCTATGGTGAATTGGAATTC
TGGCTTTCAAGTATCAAAGTTATCACCGTTGTTGGGTTCATGATCTTCGC
CATCTGCATTGACGCCGGCGTCGGTGACAAAGGGTATCTCGGATTTCGCT
ATTGGGTCGACCCAGGCCCCTTTGCTCCTTATTCGGGTGTCCACCCCGAC
TCGACAGCAAAGTTCGTCGGTTTCTGGTCCGTTCTTATCCAGGCTGGCTT
TTCGTATCAGGGAACGGAACTGGTCGGTATCGCAGCCGCTGAGACAGAAA
ACCCTCGCAAAACGGTGCCTGCGGCTATTCGCAAGACCTTCTACCGCATT
CTGTTCTTCTTCGTCCTGACCATCTTCTTCATCGGTCTTCTGGTGCCCTA
CACCAACGAGAACCTCCTGACCGATGGAAACGATGCTAACTCGTCGCCTT
TTGTCATTGCGGCTAGGCTTGCTGGAGTTAAGGTTCTGCCTCACATTATC
AACGCAGTCCTGCTGACTGTGGTGCTCTCTGCTGCCAATTCAAATGTTTA
CAGTGGCAGTCGTATCTTGCTTGGTCTGGCTCAAGAAGGGTTTGCCCCGC
GCTGGTTCAAGAAGACTTCTAAGAAGGGTGTGCCATACTTCAGCGTTGCC
TTCACGGCAGCCTTCGGTCTTCTCGGTTTCATGAATGTCTCCAATGCAGG
TAGCACTGTGTTCAACTGGCTCGTCAACATCGCCGGTGTCGCAGGCTTCA
TCACTTGGGCATCGTTGAACGGCTGCCATCTTGCTTTCATGCGTGCCCTG
AAGGCTCGCGACATCTCCCGTGACACCCTTCCTTATAAAGCTATCTGGCA
GCCCTACTATTCCTGGTACGGGTTGTTCTTCAACATCCTCATTATCATCA
CGCAAGGTTTCACCTCCTTTATTACCAGCTTCAGCGTCACGGATTTCTTC
ATTGATTACATCAGTCTGATTCTCTTCGTCGTGCTCTATGTTGGCCACAA
GATCTACTTCCGGACATCTTTTGTCCATCCTCTTGAGGCTGATATTGATA
CGGGCCGCCAGGAGGTCGAGAACGAAACGTGGGAAACGGAGGCTCCCGCC
ACGAAATGGCACCAGAAGCTTGCACGCTCATTCCTGGGCTGAATGGCTTT
CGGGAACAAGGTCAAATCCACGTCTGCCGAGGGGGAAAAGGGCAAGATGG
CGCCTGAAGAGACTGTCCAGGTTCAGCCCACGAACCCTTCGTCCGACTTG
AACGACATCGATTGTGAGAAACATGGCGCCAGTCGCGAGTCAAATCCCAT
GCCCGATCTCAAGCGGAAGCTGAGAAGTCGCCATCTTCAGATGATTGCCA
TTGGTGGTACTATTGGCACTGGTCTGTTCATCGGTAGTGGTACTGCTGTC
GCCAACGGAGGTCCTGTTGGTGCCCTCATTGCCTACATCTTCGTCGGTAC
GATCGTCTACTCGGTTATGACCTCCCTGGGTGAAATAGCGACCTATATTC
CGATTCCTGGAGCGTTCACAGCCTACGCTGCTCGTCTGGTGGACCCCAGT
CTTGGCTTCGCCATGGGGTGGATCTATTGGTTTTCCTGGGCTAGTACATT
TGCACTCGAGTTAACGGCAACCGGTCTGATCATTCAATTCTGGGACGACT
CCATCAATATCGCTATCTTCATCGCCATCTTTTGGGTTCTGATAGCTCTA
TTGAATTTCCTGCCTGTCAGCTTCTATGGTGAATTGGAATTCTGGCTTTC
AAGTATCAAAGTTATCACCGTTGTTGGGTTCATGATCTTCGCCATCTGCA
TTGACGCCGGCGTCGGTGACAAAGGGTATCTCGGATTTCGCTATTGGGTC
GACCCAGGCCCCTTTGCTCCTTATTCGGGTGTCCACCCCGACTCGACAGC
AAAGTTCGTCGGTTTCTGGTCCGTTCTTATCCAGGCTGGCTTTTCGTATC
AGGGAACGGAACTGGTCGGTATCGCAGCCGCTGAGACAGAAAACCCTCGC
AAAACGGTGCCTGCGGCTATTCGCAAGACCTTCTACCGCATTCTGTTCTT
CTTCGTCCTGACCATCTTCTTCATCGGTCTTCTGGTGCCCTACACCAACG
AGAACCTCCTGACCGATGGAAACGATGCTAACTCGTCGCCTTTTGTCATT
GCGGCTAGGCTTGCTGGAGTTAAGGTTCTGCCTCACATTATCAACGCAGT
CCTGCTGACTGTGGTGCTCTCTGCTGCCAATTCAAATGTTTACAGTGGCA
GTCGTATCTTGCTTGGTCTGGCTCAAGAAGGGTTTGCCCCGCGCTGGTTC
AAGAAGACTTCTAAGAAGGGTGTGCCATACTTCAGCGTTGCCTTCACGGC
AGCCTTCGGTCTTCTCGGTTTCATGAATGTCTCCAATGCAGGTAGCACTG
TGTTCAACTGGCTCGTCAACATCGCCGGTGTCGCAGGCTTCATCACTTGG
GCATCGTTGAACGGCTGCCATCTTGCTTTCATGCGTGCCCTGAAGGCTCG
CGACATCTCCCGTGACACCCTTCCTTATAAAGCTATCTGGCAGCCCTACT
ATTCCTGGTACGGGTTGTTCTTCAACATCCTCATTATCATCACGCAAGGT
TTCACCTCCTTTATTACCAGCTTCAGCGTCACGGATTTCTTCATTGATTA
CATCAGTCTGATTCTCTTCGTCGTGCTCTATGTTGGCCACAAGATCTACT
TCCGGACATCTTTTGTCCATCCTCTTGAGGCTGATATTGATACGGGCCGC
CAGGAGGTCGAGAACGAAACGTGGGAAACGGAGGCTCCCGCCACGAAATG
GCACCAGAAGCTTGCACGCTCATTCCTGGGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006865amino acid transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006400CBS51388_006400Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006400-T1.exon1CBS51388_006400-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006400-T1.exon2CBS51388_006400-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006400-T1.cdsCBS51388_006400-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006400-T1CBS51388_006400-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004840
DBxrefInterPro:IPR004841
DBxrefInterPro:IPR004762
DBxrefPFAM:PF13520
DBxrefPFAM:PF00324
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1545778..1547567 +
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