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CBS51388_006402-T1, CBS51388_006402-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006402-T1
Unique NameCBS51388_006402-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1552761..1553890+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006402-T1 ID=CBS51388_006402-T1|Name=CBS51388_006402-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1130bp|location=Sequence derived from alignment at An09:1552761..1553890+ (Aspergillus niger CBS 513.88)
ATGCATCTCTCTCTTTTCTCTCTCTTTTCCCTCCTCTCCGCGTCAACACT
GGCAACCGCAGCATCCGCCGCCCGTCATCTCACCATCACCATCCCCCCCT
CGACCATCCTCCCCAACCCGAATATCCTCTCAGCCAATACTCACGCGACG
CTCACAACCTTCACAAAGAACACAAACTACAATCACCACTTCGCTGCACC
CCTCACCCGCTCCGCAACCTTCAACTTCCACCATCTCCCCGCCTCCTCGA
AGCCTGAATCCTACCTCCTCGACATCCGCTCCCCGGAGTATGTTTTCGCT
CCGCTCCGCGTCGACGTCGCTGCCGATGGCTCTCTCCTGGGTATCTGGGA
GACCTTTCGCGGCAACCCCTGGGATAATCGCGGCGCGGAGAAGTTCGTCT
TTGATGCGAGTGCTCCCCGCGGTGGTAACAGTGGAGCTGAAGAAGCTGTA
ATGGTTGAGGCGAAGGTTCTGGCCCGGAGAGGATTCTATGAGGAGAGGTC
GAAGTGTATGTTTTCCCACCCCAGTTGTTCCCTCTTAAGTCTTGATGTTA
GCTTTAGAGGACGAGGAGCATGCGTGCGCAATGGTATCTGTTCATCGAGT
GAATTACTTGGTAACCATTGAGCGCACGCGCGAGTCTTTGCACTTCATAT
TTCACCTTGTTTTGGATTCAGATTGCTGACTGGGATTGAAATCATCGATA
TAGTCTCTCCCCTGGCTTTGTTCAAGAATCCCATGATCCTGATGGCTTTG
GTGGCTCTTGGGTTCACCTTTGGAATGCCCAAGTTAATGGAGAATAGTAA
GTCCCGTCCAAAGTCCCTAGACCTCACTTGTTTTATATTCCTCTCGCCAC
GTCTATCTTGTGGATAGCTTCTTGCTAACATGCACTCTTATCAGTGGACC
CCGAAATGCGCGCCGAATTCGAGAAACAGTCTCGCTCTTCTCCCATCGGA
GGCGCAACCAGGAGTGCTATGGCTGGCGGTGGGGCTCCCGGGAACTTCGA
TCTGGCTGGCTGGATGGCCGGTGCTACTCCTAGACCCGGTGCATCTGGCG
CGGAAGCTGCGGCTGCGGTTGAAGGAGCGGCTGCTACAACGGGCCGGGAG
AGCGGTGGTGCATCACGGAGAAGAGGTTGA
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Coding sequence (CDS) from alignment at An09:1552761..1553890+

>CBS51388_006402-T1 ID=CBS51388_006402-T1|Name=CBS51388_006402-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2502bp|location=Sequence derived from alignment at An09:1552761..1553890+ (Aspergillus niger CBS 513.88)
ATGCATCTCTCTCTTTTCTCTCTCTTTTCCCTCCTCTCCGCGTCAACACT
GGCAACCGCAGCATCCGCCGCCCGTCATCTCACCATCACCATCCCCCCCT
CGACCATCCTCCCCAACCCGAATATCCTCTCAGCCAATACTCACGCGACG
CTCACAACCTTCACAAAGAACACAAACTACAATCACCACTTCGCTGCACC
CCTCACCCGCTCCGCAACCTTCAACTTCCACCATCTCCCCGCCTCCTCGA
AGCCTGAATCCTACCTCCTCGACATCCGCTCCCCGGAGTATGTTTTCGCT
CCGCTCCGCGTCGACGTCGCTGCCGATGGCTCTCTCCTGGGTATCTGGGA
GACCTTTCGCGGCAACCCCTGGGATAATCGCGGCGCGGAGAAGTTCGTCT
TTGATGCGAGTGCTCCCCGCGGTGGTAACAGTGGAGCTGAAGAAGCTGTA
ATGGTTGAGGCGAAGGTTCTGGCCCGGAGAGGATTCTATGAGGAGAGGTC
GAAGTTCTCTCCCCTGGCTTTGTTCAAGAATCCCATGATCCTGATGGCTT
TGGTGGCTCTTGGGTTCACCTTTGGAATGCCCAAGTTAATGGAGAATATG
GACCCCGAAATGCGCGCCGAATTCGAGAAACAGTCTCGCTCTTCTCCCAT
CGGAGGCGCAACCAGGAGTGCTATGGCTGGCGGTGGGGCTCCCGGGAACT
TCGATCTGGCTGGCTGGATGGCCGGTGCTACTCCTAGACCCGGTGCATCT
GGCGCGGAAGCTGCGGCTGCGGTTGAAGGAGCGGCTGCTACAACGGGCCG
GGAGAGCGGTGGTGCATCACGGAGAAGAGGTTGAATGCATCTCTCTCTTT
TCTCTCTCTTTTCCCTCCTCTCCGCGTCAACACTGGCAACCGCAGCATCC
GCCGCCCGTCATCTCACCATCACCATCCCCCCCTCGACCATCCTCCCCAA
CCCGAATATCCTCTCAGCCAATACTCACGCGACGCTCACAACCTTCACAA
AGAACACAAACTACAATCACCACTTCGCTGCACCCCTCACCCGCTCCGCA
ACCTTCAACTTCCACCATCTCCCCGCCTCCTCGAAGCCTGAATCCTACCT
CCTCGACATCCGCTCCCCGGAGTATGTTTTCGCTCCGCTCCGCGTCGACG
TCGCTGCCGATGGCTCTCTCCTGGGTATCTGGGAGACCTTTCGCGGCAAC
CCCTGGGATAATCGCGGCGCGGAGAAGTTCGTCTTTGATGCGAGTGCTCC
CCGCGGTGGTAACAGTGGAGCTGAAGAAGCTGTAATGGTTGAGGCGAAGG
TTCTGGCCCGGAGAGGATTCTATGAGGAGAGGTCGAAGTTCTCTCCCCTG
GCTTTGTTCAAGAATCCCATGATCCTGATGGCTTTGGTGGCTCTTGGGTT
CACCTTTGGAATGCCCAAGTTAATGGAGAATATGGACCCCGAAATGCGCG
CCGAATTCGAGAAACAGTCTCGCTCTTCTCCCATCGGAGGCGCAACCAGG
AGTGCTATGGCTGGCGGTGGGGCTCCCGGGAACTTCGATCTGGCTGGCTG
GATGGCCGGTGCTACTCCTAGACCCGGTGCATCTGGCGCGGAAGCTGCGG
CTGCGGTTGAAGGAGCGGCTGCTACAACGGGCCGGGAGAGCGGTGGTGCA
TCACGGAGAAGAGGTTGAATGCATCTCTCTCTTTTCTCTCTCTTTTCCCT
CCTCTCCGCGTCAACACTGGCAACCGCAGCATCCGCCGCCCGTCATCTCA
CCATCACCATCCCCCCCTCGACCATCCTCCCCAACCCGAATATCCTCTCA
GCCAATACTCACGCGACGCTCACAACCTTCACAAAGAACACAAACTACAA
TCACCACTTCGCTGCACCCCTCACCCGCTCCGCAACCTTCAACTTCCACC
ATCTCCCCGCCTCCTCGAAGCCTGAATCCTACCTCCTCGACATCCGCTCC
CCGGAGTATGTTTTCGCTCCGCTCCGCGTCGACGTCGCTGCCGATGGCTC
TCTCCTGGGTATCTGGGAGACCTTTCGCGGCAACCCCTGGGATAATCGCG
GCGCGGAGAAGTTCGTCTTTGATGCGAGTGCTCCCCGCGGTGGTAACAGT
GGAGCTGAAGAAGCTGTAATGGTTGAGGCGAAGGTTCTGGCCCGGAGAGG
ATTCTATGAGGAGAGGTCGAAGTTCTCTCCCCTGGCTTTGTTCAAGAATC
CCATGATCCTGATGGCTTTGGTGGCTCTTGGGTTCACCTTTGGAATGCCC
AAGTTAATGGAGAATATGGACCCCGAAATGCGCGCCGAATTCGAGAAACA
GTCTCGCTCTTCTCCCATCGGAGGCGCAACCAGGAGTGCTATGGCTGGCG
GTGGGGCTCCCGGGAACTTCGATCTGGCTGGCTGGATGGCCGGTGCTACT
CCTAGACCCGGTGCATCTGGCGCGGAAGCTGCGGCTGCGGTTGAAGGAGC
GGCTGCTACAACGGGCCGGGAGAGCGGTGGTGCATCACGGAGAAGAGGTT
GA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006402CBS51388_006402Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006402-T1.exon1CBS51388_006402-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006402-T1.exon2CBS51388_006402-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006402-T1.exon3CBS51388_006402-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006402-T1.cdsCBS51388_006402-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006402-T1CBS51388_006402-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-23)
DBxrefInterPro:IPR019008
DBxrefPFAM:PF09430
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1552761..1553890 +
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