You are here

Home

CBS51388_006415-T1, CBS51388_006415-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006415-T1
Unique NameCBS51388_006415-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An10:4171..5025-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006415-T1 ID=CBS51388_006415-T1|Name=CBS51388_006415-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=855bp|location=Sequence derived from alignment at An10:4171..5025- (Aspergillus niger CBS 513.88)
ATGGAATATGCCATGCGCTCTCCTACATCTGAAAGCCTGAATGTCCTCAA
AAGGAAGCTCACATACTGCTTGGAGGCTGCTGCGACAGCAACTGGCTGTG
AACTAGAGCTTACATGGTAGGTGCTCCATGCATACAATACTTGTCTCCAC
CTTAGTGTCTTACATCACGCATCAGGGGAGTTGGCTATGCGGACTTGAAG
CACAACCCGACCATTTGTAGAAGCTATGTCAGTGCTCTGAAAGCGATGGC
ACATCATGCAGTTTTCGACGGTTCGTATATCGAGGGAGTCTTGAATGGCG
GCTCCACCGACATGGGTATGTCAGCATCACTTCACGTTATGCTAAGCTCC
TTTCCATACTAATTGCCCCCAGGGAATGTTTCTCATGCCGTGCCTGGCTT
CCATGCTATGTTCGCTATTCCAACTGAGGGAGTGAATCATACACCTCAGT
TCACTGCAGGTGCTGGGTCGGCAGAGGCATTTAAACGGAGCCTTGCATGT
GCGGCAGGAATGGCTGTCACCGCTTGTCAAATCTTGGTCGACGATACTTT
TGCCGCCCAGGTCAGGAGCGACTTCGACTCGGGTGTTTAGTCTGATATAG
AGGTTAAAGAATCAATGTGGAAGCTCATCCTATTAGAGTGTCAAGAGATG
ACATCCTACATATGCCCGTAGTAAACCGATGTAGCCACTAGCGAATGGAT
TTAGATGATCCTTCAATCCACTACCCATTTGACTGGCCATCGTGTGGCAT
AATTTATTCAGTGTAATAATAGGTTGGTGTCTTTCACGCTTCGATCCATT
TTCTCTTGATTCGCATGCCAAGTTGTACGATCTAGAGGAATATGGGGCGT
TTTGA
back to top

Coding sequence (CDS) from alignment at An10:4171..5025-

>CBS51388_006415-T1 ID=CBS51388_006415-T1|Name=CBS51388_006415-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2196bp|location=Sequence derived from alignment at An10:4171..5025- (Aspergillus niger CBS 513.88)
GTTGGTGTCTTTCACGCTTCGATCCATTTTCTCTTGATTCGCATGCCAAG
TTGTACGATCTAGAGGAATATGGGGCGTTTTGAGGAATGTTTCTCATGCC
GTGCCTGGCTTCCATGCTATGTTCGCTATTCCAACTGAGGGAGTGAATCA
TACACCTCAGTTCACTGCAGGTGCTGGGTCGGCAGAGGCATTTAAACGGA
GCCTTGCATGTGCGGCAGGAATGGCTGTCACCGCTTGTCAAATCTTGGTC
GACGATACTTTTGCCGCCCAGGTCAGGAGCGACTTCGACTCGGGGGAGTT
GGCTATGCGGACTTGAAGCACAACCCGACCATTTGTAGAAGCTATGTCAG
TGCTCTGAAAGCGATGGCACATCATGCAGTTTTCGACGGTTCGTATATCG
AGGGAGTCTTGAATGGCGGCTCCACCGACATGGATGGAATATGCCATGCG
CTCTCCTACATCTGAAAGCCTGAATGTCCTCAAAAGGAAGCTCACATACT
GCTTGGAGGCTGCTGCGACAGCAACTGGCTGTGAACTAGAGCTTACATGG
TTGGTGTCTTTCACGCTTCGATCCATTTTCTCTTGATTCGCATGCCAAGT
TGTACGATCTAGAGGAATATGGGGCGTTTTGAGGAATGTTTCTCATGCCG
TGCCTGGCTTCCATGCTATGTTCGCTATTCCAACTGAGGGAGTGAATCAT
ACACCTCAGTTCACTGCAGGTGCTGGGTCGGCAGAGGCATTTAAACGGAG
CCTTGCATGTGCGGCAGGAATGGCTGTCACCGCTTGTCAAATCTTGGTCG
ACGATACTTTTGCCGCCCAGGTCAGGAGCGACTTCGACTCGGGGGAGTTG
GCTATGCGGACTTGAAGCACAACCCGACCATTTGTAGAAGCTATGTCAGT
GCTCTGAAAGCGATGGCACATCATGCAGTTTTCGACGGTTCGTATATCGA
GGGAGTCTTGAATGGCGGCTCCACCGACATGGATGGAATATGCCATGCGC
TCTCCTACATCTGAAAGCCTGAATGTCCTCAAAAGGAAGCTCACATACTG
CTTGGAGGCTGCTGCGACAGCAACTGGCTGTGAACTAGAGCTTACATGGT
TGGTGTCTTTCACGCTTCGATCCATTTTCTCTTGATTCGCATGCCAAGTT
GTACGATCTAGAGGAATATGGGGCGTTTTGAGGAATGTTTCTCATGCCGT
GCCTGGCTTCCATGCTATGTTCGCTATTCCAACTGAGGGAGTGAATCATA
CACCTCAGTTCACTGCAGGTGCTGGGTCGGCAGAGGCATTTAAACGGAGC
CTTGCATGTGCGGCAGGAATGGCTGTCACCGCTTGTCAAATCTTGGTCGA
CGATACTTTTGCCGCCCAGGTCAGGAGCGACTTCGACTCGGGGGAGTTGG
CTATGCGGACTTGAAGCACAACCCGACCATTTGTAGAAGCTATGTCAGTG
CTCTGAAAGCGATGGCACATCATGCAGTTTTCGACGGTTCGTATATCGAG
GGAGTCTTGAATGGCGGCTCCACCGACATGGATGGAATATGCCATGCGCT
CTCCTACATCTGAAAGCCTGAATGTCCTCAAAAGGAAGCTCACATACTGC
TTGGAGGCTGCTGCGACAGCAACTGGCTGTGAACTAGAGCTTACATGGTT
GGTGTCTTTCACGCTTCGATCCATTTTCTCTTGATTCGCATGCCAAGTTG
TACGATCTAGAGGAATATGGGGCGTTTTGAGGAATGTTTCTCATGCCGTG
CCTGGCTTCCATGCTATGTTCGCTATTCCAACTGAGGGAGTGAATCATAC
ACCTCAGTTCACTGCAGGTGCTGGGTCGGCAGAGGCATTTAAACGGAGCC
TTGCATGTGCGGCAGGAATGGCTGTCACCGCTTGTCAAATCTTGGTCGAC
GATACTTTTGCCGCCCAGGTCAGGAGCGACTTCGACTCGGGGGAGTTGGC
TATGCGGACTTGAAGCACAACCCGACCATTTGTAGAAGCTATGTCAGTGC
TCTGAAAGCGATGGCACATCATGCAGTTTTCGACGGTTCGTATATCGAGG
GAGTCTTGAATGGCGGCTCCACCGACATGGATGGAATATGCCATGCGCTC
TCCTACATCTGAAAGCCTGAATGTCCTCAAAAGGAAGCTCACATACTGCT
TGGAGGCTGCTGCGACAGCAACTGGCTGTGAACTAGAGCTTACATG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006415CBS51388_006415Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006415-T1CBS51388_006415-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006415-T1.cdsCBS51388_006415-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006415-T1.exon4CBS51388_006415-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_006415-T1.exon3CBS51388_006415-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006415-T1.exon2CBS51388_006415-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006415-T1.exon1CBS51388_006415-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteMEROPS:MER0021873
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An10supercontigAn10:4171..5025 -
Powered by Drupal