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CBS51388_006455-T1, CBS51388_006455-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006455-T1
Unique NameCBS51388_006455-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An10:118818..119888-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006455-T1 ID=CBS51388_006455-T1|Name=CBS51388_006455-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1071bp|location=Sequence derived from alignment at An10:118818..119888- (Aspergillus niger CBS 513.88)
ATGGCCTCCCCACCCCCCTCCCCCCTCACCACCACCAGCGCCGCCTCCGC
GCCGCCCGACAACTCCAACAAACCCGCCGCACCCCCCGTGCACGTCCTCC
CAACCCAACTCGCAACCATCTACTCCTACATCCACCCAGCGGCGCTACTC
TCCGCCTTCGCCGCGCGATTCCCCGCGCTGGTCAACGACCCCGTCGCAGA
AATGGCCCAGCAATTGCCCCTCCTCGCCCTCGCGCACGTCGCCTACGTGA
TGATTTGTCTCCCGGCCGCGGGCTCCTCGGATTCTACTACTTCCACCACC
ACCACCACTCCCGCTTCGCCGTCTACTCCCACCGCCTCCAGCGCCTCCTC
CACAGGAACAACCACCGGTACCAACGAAAAAGGAGGAAATGTGATCCTCC
GTCCCGGCCGCGTCGGCCGGCGGCGCACGAAGGACTCGTCTTCGTCGTCG
GCGACGGCCTCGGCGATTAGTGGGCGGGTTGTTGTATGTCCTTTCCCCAT
TACCCTTAATATTCTCCTCAATATATTTATCCTTACTAATGATTGATGTG
TGATAATATCAGGCTTCGCTATTATCCTTGACATTGACAACCCTCCTCGC
CACCCCCGTCCTCAGCATCCTTCTTGTTCTCTTTGGCGCCCCGTTCACGA
CTCATCATGCTCAGACGGTTCTGTGTGCGGCGCATATGGCTATTCTGTCG
TCGACGGCGCTGGTGTATGTTCATGGCGTGGATGGGAATGTGTGGAAGGA
GGTGTGGGGGGCTAAGAGGCCGGGGGATATCGTTTGGGGTGGTGCGTTGG
GGACTTGTGTGGGGGCTTGGTTGGGGGCGGTGCCGGTGCCGCTTGATTGG
TATGTTCATCCTCTTTATTTCTTGTTTGGAGGGGATAGGGGGTGATAAAG
GGATTGGGTGTGCTAATGTTGTGCAGGGACCGTCCGTGGCAGGCGTATCC
GATTACCTTGTTGACGGGGGCGTATATCGGGTTTGTGGTCGGGTCGGTGC
TGGGGAGGTCGGTGTTGTTTGGGAAGAGGATTCGGTTTGAGGAGGGGGAG
GATGTGAAGAAGGTTGAGTAG
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Coding sequence (CDS) from alignment at An10:118818..119888-

>CBS51388_006455-T1 ID=CBS51388_006455-T1|Name=CBS51388_006455-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2340bp|location=Sequence derived from alignment at An10:118818..119888- (Aspergillus niger CBS 513.88)
GGACCGTCCGTGGCAGGCGTATCCGATTACCTTGTTGACGGGGGCGTATA
TCGGGTTTGTGGTCGGGTCGGTGCTGGGGAGGTCGGTGTTGTTTGGGAAG
AGGATTCGGTTTGAGGAGGGGGAGGATGTGAAGAAGGTTGAGTAGGCTTC
GCTATTATCCTTGACATTGACAACCCTCCTCGCCACCCCCGTCCTCAGCA
TCCTTCTTGTTCTCTTTGGCGCCCCGTTCACGACTCATCATGCTCAGACG
GTTCTGTGTGCGGCGCATATGGCTATTCTGTCGTCGACGGCGCTGGTATG
GCCTCCCCACCCCCCTCCCCCCTCACCACCACCAGCGCCGCCTCCGCGCC
GCCCGACAACTCCAACAAACCCGCCGCACCCCCCGTGCACGTCCTCCCAA
CCCAACTCGCAACCATCTACTCCTACATCCACCCAGCGGCGCTACTCTCC
GCCTTCGCCGCGCGATTCCCCGCGCTGGTCAACGACCCCGTCGCAGAAAT
GGCCCAGCAATTGCCCCTCCTCGCCCTCGCGCACGTCGCCTACGTGATGA
TTTGTCTCCCGGCCGCGGGCTCCTCGGATTCTACTACTTCCACCACCACC
ACCACTCCCGCTTCGCCGTCTACTCCCACCGCCTCCAGCGCCTCCTCCAC
AGGAACAACCACCGGTACCAACGAAAAAGGAGGAAATGTGATCCTCCGTC
CCGGCCGCGTCGGCCGGCGGCGCACGAAGGACTCGTCTTCGTCGTCGGCG
ACGGCCTCGGCGATTAGTGGGCGGGTTGTTGGACCGTCCGTGGCAGGCGT
ATCCGATTACCTTGTTGACGGGGGCGTATATCGGGTTTGTGGTCGGGTCG
GTGCTGGGGAGGTCGGTGTTGTTTGGGAAGAGGATTCGGTTTGAGGAGGG
GGAGGATGTGAAGAAGGTTGAGTAGGCTTCGCTATTATCCTTGACATTGA
CAACCCTCCTCGCCACCCCCGTCCTCAGCATCCTTCTTGTTCTCTTTGGC
GCCCCGTTCACGACTCATCATGCTCAGACGGTTCTGTGTGCGGCGCATAT
GGCTATTCTGTCGTCGACGGCGCTGGTATGGCCTCCCCACCCCCCTCCCC
CCTCACCACCACCAGCGCCGCCTCCGCGCCGCCCGACAACTCCAACAAAC
CCGCCGCACCCCCCGTGCACGTCCTCCCAACCCAACTCGCAACCATCTAC
TCCTACATCCACCCAGCGGCGCTACTCTCCGCCTTCGCCGCGCGATTCCC
CGCGCTGGTCAACGACCCCGTCGCAGAAATGGCCCAGCAATTGCCCCTCC
TCGCCCTCGCGCACGTCGCCTACGTGATGATTTGTCTCCCGGCCGCGGGC
TCCTCGGATTCTACTACTTCCACCACCACCACCACTCCCGCTTCGCCGTC
TACTCCCACCGCCTCCAGCGCCTCCTCCACAGGAACAACCACCGGTACCA
ACGAAAAAGGAGGAAATGTGATCCTCCGTCCCGGCCGCGTCGGCCGGCGG
CGCACGAAGGACTCGTCTTCGTCGTCGGCGACGGCCTCGGCGATTAGTGG
GCGGGTTGTTGGACCGTCCGTGGCAGGCGTATCCGATTACCTTGTTGACG
GGGGCGTATATCGGGTTTGTGGTCGGGTCGGTGCTGGGGAGGTCGGTGTT
GTTTGGGAAGAGGATTCGGTTTGAGGAGGGGGAGGATGTGAAGAAGGTTG
AGTAGGCTTCGCTATTATCCTTGACATTGACAACCCTCCTCGCCACCCCC
GTCCTCAGCATCCTTCTTGTTCTCTTTGGCGCCCCGTTCACGACTCATCA
TGCTCAGACGGTTCTGTGTGCGGCGCATATGGCTATTCTGTCGTCGACGG
CGCTGGTATGGCCTCCCCACCCCCCTCCCCCCTCACCACCACCAGCGCCG
CCTCCGCGCCGCCCGACAACTCCAACAAACCCGCCGCACCCCCCGTGCAC
GTCCTCCCAACCCAACTCGCAACCATCTACTCCTACATCCACCCAGCGGC
GCTACTCTCCGCCTTCGCCGCGCGATTCCCCGCGCTGGTCAACGACCCCG
TCGCAGAAATGGCCCAGCAATTGCCCCTCCTCGCCCTCGCGCACGTCGCC
TACGTGATGATTTGTCTCCCGGCCGCGGGCTCCTCGGATTCTACTACTTC
CACCACCACCACCACTCCCGCTTCGCCGTCTACTCCCACCGCCTCCAGCG
CCTCCTCCACAGGAACAACCACCGGTACCAACGAAAAAGGAGGAAATGTG
ATCCTCCGTCCCGGCCGCGTCGGCCGGCGGCGCACGAAGGACTCGTCTTC
GTCGTCGGCGACGGCCTCGGCGATTAGTGGGCGGGTTGTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005789endoplasmic reticulum membrane
Vocabulary: Biological Process
TermDefinition
GO:0006506GPI anchor biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006455CBS51388_006455Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006455-T1CBS51388_006455-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006455-T1.cdsCBS51388_006455-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006455-T1.exon3CBS51388_006455-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006455-T1.exon2CBS51388_006455-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006455-T1.exon1CBS51388_006455-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR009580
DBxrefPFAM:PF06699
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An10supercontigAn10:118818..119888 -
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