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Sequences
The following sequences are available for this feature:
mRNA from alignment at An10:190828..192879- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006475-T1 ID=CBS51388_006475-T1|Name=CBS51388_006475-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2052bp|location=Sequence derived from alignment at An10:190828..192879- (Aspergillus niger CBS 513.88)
ATGTCAAGCCCCGTGTTATGTGATTGGTGTCAGACAACGGTCTTTGACAA
ACATCTTCTGGCCGTGATTGGTCGCGATAGGGATTCGATGTACATGGATC
AGAGTCCTTTTAGTGTGATGATTGACCCAGTGGCATACTTCGGTAATCGG
AATGCGCTTGCCGGGTTCCAGCGGTCCTTTCGTCGAAACAATGAATTGCT
ATTGCAGAATGCGGCCCGGTGGTGTATCTTCTGTATGCTTCTTAGAAATT
TACGAGGTGGACTACGCGATGATTTCGAGTTCACAATTACCGTCAACGAT
CCCTGGAAGTGGTCCACAGTGACTGTTGCTGCGCACGATGACGAGATTAC
GAACCGCACTGGTTACTTTAGAGTCTATAAGACAGTTAGCCCTAACAAAG
TCGCATTGTCTGGTTCGACCTTCAATAACGCGCGGGTAGCAGAACAGAAC
GTCGATATCTGTCCAGCAAATAACGATCTTCTCCAACATGACAGCTCACT
ACCTCGGCAACTAGTTCGAGATTGCGGGGCCCTCCGCGCTCTGATTGACG
ATTGTACGGCTAACCACTCTAATTGCAAGCCACGGGAGGGATTAGGCTCT
CCTTCCTTGCTGCTTGAACTTTCTGGAACATCAGTGTCACCGGCAGTACG
CCTCATCAAGACATCGGAAATTAAGGTCGTGCCAATTCGCTACGTCTGCC
TTAGCTACTGCTGGGGCGGAATACAGCCAAACATGACGACAACCAGCCGT
TTGGACTCATACTTAGCCGGAATTGATACAACAGAGATTTCTGAAACAAT
TCTGGACGCCATCCGTGTCAGTCTTGCGATGGGCTACCAGTACTTATGGG
TGGATGCTCTGTGTATTGTGCAAGACTGCGAGCCAGACAAGATTGTCGAG
CTAGGTAAGATGGCTTCTATTTACTCGGGAGCCATCCTTACAATATGTGT
CATGTCGGCCAAAAGTGCGACGGAAGGCTTCTTGCGACAGGCCTATCCAA
ACTACAGCGACGACAAGTCAATACGCACATGGCACGCAGATATACGCGAC
GACATAAGCCAATTAGTGACTGGTTCCCTAGAAATACGGAGTGATTTCTC
CAACGATGACATTTTTGACAGTCCAATTCTGAAACGAGGCTGGACCTTCC
AAGAGGCGCTTCTTAGTCCACGCCTTGTCGTATTTTCTGCTCATGGTCAG
AAGCCTGCATTGCGATGCTCCACGCATACCGTCCAATCGGACGGTGGTCG
GATCACAACGCACCCCAAAACTTTGGTGAACCTTGGGGAGCTGGAGCAAG
TAGTAGAAAGGGCAAAGTCCGAACACAGATACTCTAGAGAATATTTTATT
CAATCGGCCAAAGCTGAAGAATGGGTCAAGGTTGTTGAACAATATTCTCG
GAGATCATTGACATACCAGGAGGACAAGATGCCCGCCCTCATGGGCATTG
TGTCAGAGTGGGAGTCCCTGTTCATGCCGGGTAAGTATTGGGCCGGTATT
TGGTCCAAGACCTTGGCGAAGGACCTCATATGGAAATGTCATAGAAACTA
TTTTCCACGGTCAGCCTGCGAGTCGTACGTTGCCCCGTCATGGTCCTGGG
CGTCTCGTGCCCATCCCGTCTATTACGAAAGTTTGGGGGACATGCTCTTT
TTCGAAGGAGAAGATTCTTTTGAGGTCGTTTCGTGTGAGGTGATTCCCAT
TCACAAGGACCTGCCAAACGGCGCGATCAAATCGGCACAGTTAACTGTGA
AGTGTATTGCTGAGCTGGTGGACATTGAGGGCCCTGAATCAGAAGATGTT
TCCTGTATAGCGTCAAGGGGGGAAGTGGAGGTTTATTTTGACGACAGTCC
TAGGCCACAAGATGTCAGAAAAGCTTGGCTTCTATACATTAACGATGAAG
AGCCGTATAATCTTCCGCACGGAATTGGGATAGCGGTCGTTGAAGTCGAC
ACAACCAATGCTGATGGCACCAAGTTATACAAGCGAGTAGGTAGCTTTGT
TTGCAGGGGGCCTGGGCTCACAGGCCCACAAAGGACTTTCGCACTTATTT
AA back to topCoding sequence (CDS) from alignment at An10:190828..192879- >CBS51388_006475-T1 ID=CBS51388_006475-T1|Name=CBS51388_006475-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2052bp|location=Sequence derived from alignment at An10:190828..192879- (Aspergillus niger CBS 513.88)
ATGTCAAGCCCCGTGTTATGTGATTGGTGTCAGACAACGGTCTTTGACAA
ACATCTTCTGGCCGTGATTGGTCGCGATAGGGATTCGATGTACATGGATC
AGAGTCCTTTTAGTGTGATGATTGACCCAGTGGCATACTTCGGTAATCGG
AATGCGCTTGCCGGGTTCCAGCGGTCCTTTCGTCGAAACAATGAATTGCT
ATTGCAGAATGCGGCCCGGTGGTGTATCTTCTGTATGCTTCTTAGAAATT
TACGAGGTGGACTACGCGATGATTTCGAGTTCACAATTACCGTCAACGAT
CCCTGGAAGTGGTCCACAGTGACTGTTGCTGCGCACGATGACGAGATTAC
GAACCGCACTGGTTACTTTAGAGTCTATAAGACAGTTAGCCCTAACAAAG
TCGCATTGTCTGGTTCGACCTTCAATAACGCGCGGGTAGCAGAACAGAAC
GTCGATATCTGTCCAGCAAATAACGATCTTCTCCAACATGACAGCTCACT
ACCTCGGCAACTAGTTCGAGATTGCGGGGCCCTCCGCGCTCTGATTGACG
ATTGTACGGCTAACCACTCTAATTGCAAGCCACGGGAGGGATTAGGCTCT
CCTTCCTTGCTGCTTGAACTTTCTGGAACATCAGTGTCACCGGCAGTACG
CCTCATCAAGACATCGGAAATTAAGGTCGTGCCAATTCGCTACGTCTGCC
TTAGCTACTGCTGGGGCGGAATACAGCCAAACATGACGACAACCAGCCGT
TTGGACTCATACTTAGCCGGAATTGATACAACAGAGATTTCTGAAACAAT
TCTGGACGCCATCCGTGTCAGTCTTGCGATGGGCTACCAGTACTTATGGG
TGGATGCTCTGTGTATTGTGCAAGACTGCGAGCCAGACAAGATTGTCGAG
CTAGGTAAGATGGCTTCTATTTACTCGGGAGCCATCCTTACAATATGTGT
CATGTCGGCCAAAAGTGCGACGGAAGGCTTCTTGCGACAGGCCTATCCAA
ACTACAGCGACGACAAGTCAATACGCACATGGCACGCAGATATACGCGAC
GACATAAGCCAATTAGTGACTGGTTCCCTAGAAATACGGAGTGATTTCTC
CAACGATGACATTTTTGACAGTCCAATTCTGAAACGAGGCTGGACCTTCC
AAGAGGCGCTTCTTAGTCCACGCCTTGTCGTATTTTCTGCTCATGGTCAG
AAGCCTGCATTGCGATGCTCCACGCATACCGTCCAATCGGACGGTGGTCG
GATCACAACGCACCCCAAAACTTTGGTGAACCTTGGGGAGCTGGAGCAAG
TAGTAGAAAGGGCAAAGTCCGAACACAGATACTCTAGAGAATATTTTATT
CAATCGGCCAAAGCTGAAGAATGGGTCAAGGTTGTTGAACAATATTCTCG
GAGATCATTGACATACCAGGAGGACAAGATGCCCGCCCTCATGGGCATTG
TGTCAGAGTGGGAGTCCCTGTTCATGCCGGGTAAGTATTGGGCCGGTATT
TGGTCCAAGACCTTGGCGAAGGACCTCATATGGAAATGTCATAGAAACTA
TTTTCCACGGTCAGCCTGCGAGTCGTACGTTGCCCCGTCATGGTCCTGGG
CGTCTCGTGCCCATCCCGTCTATTACGAAAGTTTGGGGGACATGCTCTTT
TTCGAAGGAGAAGATTCTTTTGAGGTCGTTTCGTGTGAGGTGATTCCCAT
TCACAAGGACCTGCCAAACGGCGCGATCAAATCGGCACAGTTAACTGTGA
AGTGTATTGCTGAGCTGGTGGACATTGAGGGCCCTGAATCAGAAGATGTT
TCCTGTATAGCGTCAAGGGGGGAAGTGGAGGTTTATTTTGACGACAGTCC
TAGGCCACAAGATGTCAGAAAAGCTTGGCTTCTATACATTAACGATGAAG
AGCCGTATAATCTTCCGCACGGAATTGGGATAGCGGTCGTTGAAGTCGAC
ACAACCAATGCTGATGGCACCAAGTTATACAAGCGAGTAGGTAGCTTTGT
TTGCAGGGGGCCTGGGCTCACAGGCCCACAAAGGACTTTCGCACTTATTT
AA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010730 |
| DBxref | PFAM:PF06985 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An10 | supercontig | An10:190828..192879 - |
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