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Sequences
The following sequences are available for this feature:
mRNA from alignment at An10:204882..206169- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006478-T1 ID=CBS51388_006478-T1|Name=CBS51388_006478-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1288bp|location=Sequence derived from alignment at An10:204882..206169- (Aspergillus niger CBS 513.88)
ATGCAGCTCCTTCAATCCGTTTCCACGGGCCTGCTGCTCGCCAGCAGCTG
CCTGTCCTCCCTTGCTGCGGCTCGCTCCGTTCCCGCGGCCAAGAGCATCG
CCGCCCGCCAGTCCACCGACAAGATCGCTCCCAAGGTCTTCATTGTCTCG
ATGGTAGGTTCCCCTCCCCCGCCCCCGCCATGTATTATATGCTGTCCAGC
CCTAACAAAGAACCCAGTTCGAACCCGAAGCCGCCATCTGGTGGGGTATC
CCCGAGTTCAACGTGCTCGAGCACAACATTACCATCCCCGGAGCCTCTCC
GCTGTTCCCGGATGTGCACTGCACCGCAGACCACAACATCTGCCAGCTGG
TCACCGGTGAAGCCGAGATCAACGCCGCCGTCACCGTCTCCTCCATCATC
TTCAACCCCACCTTCGACCTGACCAACACCTACTTCCTCATCGCCGGTAT
CGCCGGTGTCAACCCCGAGCTGACCACCATCTGCAGTGTGACCCTGGCTC
GCTACGCCGTCCAGGTCGCCCTGCAGTACGAGATCGACATCCGCGAAATG
CCCGCCAACGCCACCACCGGCTACTTCCCCCAGGGTTCCTACTACCCCTG
GCAATACCCCGGCAGCATCTACGGCACCGAGGTCTTCGAGGTCAACGACA
ACCTGCGCCAGCTGGCTGCTGCTTTCGCCAGCAAGGCCACCCTCGCTGAC
TCCGACGACGCCAAGGCCTACCGCGCCAAGTACAACACCTCCGACGGCAT
CTATGCCGCCGGCGCTGCTGCCCCCTCCGTCGTCCAGTGCGATGTCGCCA
CCAGCGACGTCTACTACTCCGGTAACATCCTCGGTGACACCTTCGCCAAC
ACTACTAAGGTCCTCACCAACGGTACCGGTAACTACTGCGCCTCTGCCCA
GGAGGATAACGCTACCCTCGAGGCCATGGTCCGTGCCGCTAAGGCCAAGC
TCGTTGATTTCTCCCGTATCATTGTCATGCGTACCGCCTCTGACTTCGAC
CGCCCTTACCCTGGCGAGTCGGCTCGTGAGAACCTCCTCTACGCTACTAC
TGGTGCTTATGAGCCCTCGGTTCAGAACATCTACAACGCTGGTGTCAAGA
TCGTCGAGGGTATCATCAGCCAGTGGAACTCTACTTTCGCCGCTGGTATC
ACCCCTAGCAACTACATCGGTGATATCTTCGGTACCCTCGGTGGTTCTCC
GGACTTCGGTCCCTATGCTAATGCCGCCGAGGCGGGTGTCACCCTCAAGC
GCAGTGTGCCCCGTCGTCGCAGCCTGCGGGGATACTAG back to topCoding sequence (CDS) from alignment at An10:204882..206169- >CBS51388_006478-T1 ID=CBS51388_006478-T1|Name=CBS51388_006478-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2448bp|location=Sequence derived from alignment at An10:204882..206169- (Aspergillus niger CBS 513.88)
TTCGAACCCGAAGCCGCCATCTGGTGGGGTATCCCCGAGTTCAACGTGCT
CGAGCACAACATTACCATCCCCGGAGCCTCTCCGCTGTTCCCGGATGTGC
ACTGCACCGCAGACCACAACATCTGCCAGCTGGTCACCGGTGAAGCCGAG
ATCAACGCCGCCGTCACCGTCTCCTCCATCATCTTCAACCCCACCTTCGA
CCTGACCAACACCTACTTCCTCATCGCCGGTATCGCCGGTGTCAACCCCG
AGCTGACCACCATCTGCAGTGTGACCCTGGCTCGCTACGCCGTCCAGGTC
GCCCTGCAGTACGAGATCGACATCCGCGAAATGCCCGCCAACGCCACCAC
CGGCTACTTCCCCCAGGGTTCCTACTACCCCTGGCAATACCCCGGCAGCA
TCTACGGCACCGAGGTCTTCGAGGTCAACGACAACCTGCGCCAGCTGGCT
GCTGCTTTCGCCAGCAAGGCCACCCTCGCTGACTCCGACGACGCCAAGGC
CTACCGCGCCAAGTACAACACCTCCGACGGCATCTATGCCGCCGGCGCTG
CTGCCCCCTCCGTCGTCCAGTGCGATGTCGCCACCAGCGACGTCTACTAC
TCCGGTAACATCCTCGGTGACACCTTCGCCAACACTACTAAGGTCCTCAC
CAACGGTACCGGTAACTACTGCGCCTCTGCCCAGGAGGATAACGCTACCC
TCGAGGCCATGGTCCGTGCCGCTAAGGCCAAGCTCGTTGATTTCTCCCGT
ATCATTGTCATGCGTACCGCCTCTGACTTCGACCGCCCTTACCCTGGCGA
GTCGGCTCGTGAGAACCTCCTCTACGCTACTACTGGTGCTTATGAGCCCT
CGGTTCAGAACATCTACAACGCTGGTGTCAAGATCGTCGAGGGTATCATC
AGCCAGTGGAACTCTACTTTCGCCGCTGGTATCACCCCTAGCAACTACAT
CGGTGATATCTTCGGTACCCTCGGTGGTTCTCCGGACTTCGGTCCCTATG
CTAATGCCGCCGAGGCGGGTGTCACCCTCAAGCGCAGTGTGCCCCGTCGT
CGCAGCCTGCGGGGATACTAGATGCAGCTCCTTCAATCCGTTTCCACGGG
CCTGCTGCTCGCCAGCAGCTGCCTGTCCTCCCTTGCTGCGGCTCGCTCCG
TTCCCGCGGCCAAGAGCATCGCCGCCCGCCAGTCCACCGACAAGATCGCT
CCCAAGGTCTTCATTGTCTCGATGTTCGAACCCGAAGCCGCCATCTGGTG
GGGTATCCCCGAGTTCAACGTGCTCGAGCACAACATTACCATCCCCGGAG
CCTCTCCGCTGTTCCCGGATGTGCACTGCACCGCAGACCACAACATCTGC
CAGCTGGTCACCGGTGAAGCCGAGATCAACGCCGCCGTCACCGTCTCCTC
CATCATCTTCAACCCCACCTTCGACCTGACCAACACCTACTTCCTCATCG
CCGGTATCGCCGGTGTCAACCCCGAGCTGACCACCATCTGCAGTGTGACC
CTGGCTCGCTACGCCGTCCAGGTCGCCCTGCAGTACGAGATCGACATCCG
CGAAATGCCCGCCAACGCCACCACCGGCTACTTCCCCCAGGGTTCCTACT
ACCCCTGGCAATACCCCGGCAGCATCTACGGCACCGAGGTCTTCGAGGTC
AACGACAACCTGCGCCAGCTGGCTGCTGCTTTCGCCAGCAAGGCCACCCT
CGCTGACTCCGACGACGCCAAGGCCTACCGCGCCAAGTACAACACCTCCG
ACGGCATCTATGCCGCCGGCGCTGCTGCCCCCTCCGTCGTCCAGTGCGAT
GTCGCCACCAGCGACGTCTACTACTCCGGTAACATCCTCGGTGACACCTT
CGCCAACACTACTAAGGTCCTCACCAACGGTACCGGTAACTACTGCGCCT
CTGCCCAGGAGGATAACGCTACCCTCGAGGCCATGGTCCGTGCCGCTAAG
GCCAAGCTCGTTGATTTCTCCCGTATCATTGTCATGCGTACCGCCTCTGA
CTTCGACCGCCCTTACCCTGGCGAGTCGGCTCGTGAGAACCTCCTCTACG
CTACTACTGGTGCTTATGAGCCCTCGGTTCAGAACATCTACAACGCTGGT
GTCAAGATCGTCGAGGGTATCATCAGCCAGTGGAACTCTACTTTCGCCGC
TGGTATCACCCCTAGCAACTACATCGGTGATATCTTCGGTACCCTCGGTG
GTTCTCCGGACTTCGGTCCCTATGCTAATGCCGCCGAGGCGGGTGTCACC
CTCAAGCGCAGTGTGCCCCGTCGTCGCAGCCTGCGGGGATACTAGATGCA
GCTCCTTCAATCCGTTTCCACGGGCCTGCTGCTCGCCAGCAGCTGCCTGT
CCTCCCTTGCTGCGGCTCGCTCCGTTCCCGCGGCCAAGAGCATCGCCGCC
CGCCAGTCCACCGACAAGATCGCTCCCAAGGTCTTCATTGTCTCGATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-24) |
| DBxref | InterPro:IPR009486 |
| DBxref | PFAM:PF06516 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An10 | supercontig | An10:204882..206169 - |
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