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Sequences
The following sequences are available for this feature:
mRNA from alignment at An10:223194..224372+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006485-T1 ID=CBS51388_006485-T1|Name=CBS51388_006485-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1179bp|location=Sequence derived from alignment at An10:223194..224372+ (Aspergillus niger CBS 513.88)
ATGACCAACTTCAAGTGGATCGTTGCCGCCGCCGGTCTCCTGTCTGGACA
GGTCCTGGCTGCTCCTACTGCCACTTCTACCCATGCCAAGCGCGCAACCG
TCAGCGACGTAAGCACCCTCCCTGTGAAGAACCCCACAGATATTGACATT
GGCAGGCTGCGTTCGGCTATGCTAGCCTGAACGGCGGCACCACCGGTGGT
GCCGGCGGTACTACCACTACCGTCTCGTCCTACGCTGCCTTCACCTCCGC
TGTCTCCGGCGATGACGCCAAGGTCGTCTACGTCGACGGTACCATCAAGC
AGACCGCCGACCAGGTCAAGATTGGCAGCAACACCTCCATCATCGGCAAG
GACGCCAACGCCATCCTCGAGGGATTCGGAGTGTAAGCACGTCCCAACAA
GAGGGAGCTGAATTAAGCTTACATGCAACAGTCTCGTCAAGGAGAAGGAG
AACGTTATCATCCGTAACCTCGGAGTCTCCAAGGTCCTTGCTGACAACGG
CGATGCCATTGGTGTCCGTACGTGACACCCACTCATCCTGCACACCCTAC
CATATGCTAATTCAAGCAGAGTACTCCAACAACGTCTGGATCGACCACTG
CGATGTCTCCTCCGACCGTGACCACGACAAGGACTACTACGACGGTCTGA
TTGACGTATGCCACCCACCACCAGCATCATACCAAAAGGGTTCCCACTCA
CTAACAACTACTAGATTACCCACGGCTCCGACTACGTGACCGTCTCCAAC
ACCTTCATCCACGACCACTGGAAGGCCTCCCTGGTCGGCCACTCCGACAG
CAACGAGGACGAGGACAGCGGCCACCTCACCGTCACCTACGCCAACAACT
ACTGGTACAACATCAACTCCCGCGCTCCCTCTTTCCGCTTCGGTACCGGC
CACGTCTACAACAGCTACTACCTGGACGTCAGCGACGGCATCAACACCCG
TGACGGCGCCCAGCTGCTCGTCGAGTCCAACCAGTTCGTCGACTCCAAGA
AGGCTCTCTACTCCACCGACGATGGCTACGCCGTCTCCAACGACAACGAC
TTCGGTGATTCTGAGAACACTGCCGAGGAGGGTACCCTGACTTCCATGCC
TTATGACTACACCCTTCTTGGCTCCGCCAACGTTAAGGCTGCTGTCGTCG
GCACTGCCGGTCAGACTCTTACTTTCTAA back to topCoding sequence (CDS) from alignment at An10:223194..224372+ >CBS51388_006485-T1 ID=CBS51388_006485-T1|Name=CBS51388_006485-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4860bp|location=Sequence derived from alignment at An10:223194..224372+ (Aspergillus niger CBS 513.88)
ATGACCAACTTCAAGTGGATCGTTGCCGCCGCCGGTCTCCTGTCTGGACA
GGTCCTGGCTGCTCCTACTGCCACTTCTACCCATGCCAAGCGCGCAACCG
TCAGCGACGCTGCGTTCGGCTATGCTAGCCTGAACGGCGGCACCACCGGT
GGTGCCGGCGGTACTACCACTACCGTCTCGTCCTACGCTGCCTTCACCTC
CGCTGTCTCCGGCGATGACGCCAAGGTCGTCTACGTCGACGGTACCATCA
AGCAGACCGCCGACCAGGTCAAGATTGGCAGCAACACCTCCATCATCGGC
AAGGACGCCAACGCCATCCTCGAGGGATTCGGAGTTCTCGTCAAGGAGAA
GGAGAACGTTATCATCCGTAACCTCGGAGTCTCCAAGGTCCTTGCTGACA
ACGGCGATGCCATTGGTGTCCAGTACTCCAACAACGTCTGGATCGACCAC
TGCGATGTCTCCTCCGACCGTGACCACGACAAGGACTACTACGACGGTCT
GATTGACATTACCCACGGCTCCGACTACGTGACCGTCTCCAACACCTTCA
TCCACGACCACTGGAAGGCCTCCCTGGTCGGCCACTCCGACAGCAACGAG
GACGAGGACAGCGGCCACCTCACCGTCACCTACGCCAACAACTACTGGTA
CAACATCAACTCCCGCGCTCCCTCTTTCCGCTTCGGTACCGGCCACGTCT
ACAACAGCTACTACCTGGACGTCAGCGACGGCATCAACACCCGTGACGGC
GCCCAGCTGCTCGTCGAGTCCAACCAGTTCGTCGACTCCAAGAAGGCTCT
CTACTCCACCGACGATGGCTACGCCGTCTCCAACGACAACGACTTCGGTG
ATTCTGAGAACACTGCCGAGGAGGGTACCCTGACTTCCATGCCTTATGAC
TACACCCTTCTTGGCTCCGCCAACGTTAAGGCTGCTGTCGTCGGCACTGC
CGGTCAGACTCTTACTTTCTAAATGACCAACTTCAAGTGGATCGTTGCCG
CCGCCGGTCTCCTGTCTGGACAGGTCCTGGCTGCTCCTACTGCCACTTCT
ACCCATGCCAAGCGCGCAACCGTCAGCGACGCTGCGTTCGGCTATGCTAG
CCTGAACGGCGGCACCACCGGTGGTGCCGGCGGTACTACCACTACCGTCT
CGTCCTACGCTGCCTTCACCTCCGCTGTCTCCGGCGATGACGCCAAGGTC
GTCTACGTCGACGGTACCATCAAGCAGACCGCCGACCAGGTCAAGATTGG
CAGCAACACCTCCATCATCGGCAAGGACGCCAACGCCATCCTCGAGGGAT
TCGGAGTTCTCGTCAAGGAGAAGGAGAACGTTATCATCCGTAACCTCGGA
GTCTCCAAGGTCCTTGCTGACAACGGCGATGCCATTGGTGTCCAGTACTC
CAACAACGTCTGGATCGACCACTGCGATGTCTCCTCCGACCGTGACCACG
ACAAGGACTACTACGACGGTCTGATTGACATTACCCACGGCTCCGACTAC
GTGACCGTCTCCAACACCTTCATCCACGACCACTGGAAGGCCTCCCTGGT
CGGCCACTCCGACAGCAACGAGGACGAGGACAGCGGCCACCTCACCGTCA
CCTACGCCAACAACTACTGGTACAACATCAACTCCCGCGCTCCCTCTTTC
CGCTTCGGTACCGGCCACGTCTACAACAGCTACTACCTGGACGTCAGCGA
CGGCATCAACACCCGTGACGGCGCCCAGCTGCTCGTCGAGTCCAACCAGT
TCGTCGACTCCAAGAAGGCTCTCTACTCCACCGACGATGGCTACGCCGTC
TCCAACGACAACGACTTCGGTGATTCTGAGAACACTGCCGAGGAGGGTAC
CCTGACTTCCATGCCTTATGACTACACCCTTCTTGGCTCCGCCAACGTTA
AGGCTGCTGTCGTCGGCACTGCCGGTCAGACTCTTACTTTCTAAATGACC
AACTTCAAGTGGATCGTTGCCGCCGCCGGTCTCCTGTCTGGACAGGTCCT
GGCTGCTCCTACTGCCACTTCTACCCATGCCAAGCGCGCAACCGTCAGCG
ACGCTGCGTTCGGCTATGCTAGCCTGAACGGCGGCACCACCGGTGGTGCC
GGCGGTACTACCACTACCGTCTCGTCCTACGCTGCCTTCACCTCCGCTGT
CTCCGGCGATGACGCCAAGGTCGTCTACGTCGACGGTACCATCAAGCAGA
CCGCCGACCAGGTCAAGATTGGCAGCAACACCTCCATCATCGGCAAGGAC
GCCAACGCCATCCTCGAGGGATTCGGAGTTCTCGTCAAGGAGAAGGAGAA
CGTTATCATCCGTAACCTCGGAGTCTCCAAGGTCCTTGCTGACAACGGCG
ATGCCATTGGTGTCCAGTACTCCAACAACGTCTGGATCGACCACTGCGAT
GTCTCCTCCGACCGTGACCACGACAAGGACTACTACGACGGTCTGATTGA
CATTACCCACGGCTCCGACTACGTGACCGTCTCCAACACCTTCATCCACG
ACCACTGGAAGGCCTCCCTGGTCGGCCACTCCGACAGCAACGAGGACGAG
GACAGCGGCCACCTCACCGTCACCTACGCCAACAACTACTGGTACAACAT
CAACTCCCGCGCTCCCTCTTTCCGCTTCGGTACCGGCCACGTCTACAACA
GCTACTACCTGGACGTCAGCGACGGCATCAACACCCGTGACGGCGCCCAG
CTGCTCGTCGAGTCCAACCAGTTCGTCGACTCCAAGAAGGCTCTCTACTC
CACCGACGATGGCTACGCCGTCTCCAACGACAACGACTTCGGTGATTCTG
AGAACACTGCCGAGGAGGGTACCCTGACTTCCATGCCTTATGACTACACC
CTTCTTGGCTCCGCCAACGTTAAGGCTGCTGTCGTCGGCACTGCCGGTCA
GACTCTTACTTTCTAAATGACCAACTTCAAGTGGATCGTTGCCGCCGCCG
GTCTCCTGTCTGGACAGGTCCTGGCTGCTCCTACTGCCACTTCTACCCAT
GCCAAGCGCGCAACCGTCAGCGACGCTGCGTTCGGCTATGCTAGCCTGAA
CGGCGGCACCACCGGTGGTGCCGGCGGTACTACCACTACCGTCTCGTCCT
ACGCTGCCTTCACCTCCGCTGTCTCCGGCGATGACGCCAAGGTCGTCTAC
GTCGACGGTACCATCAAGCAGACCGCCGACCAGGTCAAGATTGGCAGCAA
CACCTCCATCATCGGCAAGGACGCCAACGCCATCCTCGAGGGATTCGGAG
TTCTCGTCAAGGAGAAGGAGAACGTTATCATCCGTAACCTCGGAGTCTCC
AAGGTCCTTGCTGACAACGGCGATGCCATTGGTGTCCAGTACTCCAACAA
CGTCTGGATCGACCACTGCGATGTCTCCTCCGACCGTGACCACGACAAGG
ACTACTACGACGGTCTGATTGACATTACCCACGGCTCCGACTACGTGACC
GTCTCCAACACCTTCATCCACGACCACTGGAAGGCCTCCCTGGTCGGCCA
CTCCGACAGCAACGAGGACGAGGACAGCGGCCACCTCACCGTCACCTACG
CCAACAACTACTGGTACAACATCAACTCCCGCGCTCCCTCTTTCCGCTTC
GGTACCGGCCACGTCTACAACAGCTACTACCTGGACGTCAGCGACGGCAT
CAACACCCGTGACGGCGCCCAGCTGCTCGTCGAGTCCAACCAGTTCGTCG
ACTCCAAGAAGGCTCTCTACTCCACCGACGATGGCTACGCCGTCTCCAAC
GACAACGACTTCGGTGATTCTGAGAACACTGCCGAGGAGGGTACCCTGAC
TTCCATGCCTTATGACTACACCCTTCTTGGCTCCGCCAACGTTAAGGCTG
CTGTCGTCGGCACTGCCGGTCAGACTCTTACTTTCTAAATGACCAACTTC
AAGTGGATCGTTGCCGCCGCCGGTCTCCTGTCTGGACAGGTCCTGGCTGC
TCCTACTGCCACTTCTACCCATGCCAAGCGCGCAACCGTCAGCGACGCTG
CGTTCGGCTATGCTAGCCTGAACGGCGGCACCACCGGTGGTGCCGGCGGT
ACTACCACTACCGTCTCGTCCTACGCTGCCTTCACCTCCGCTGTCTCCGG
CGATGACGCCAAGGTCGTCTACGTCGACGGTACCATCAAGCAGACCGCCG
ACCAGGTCAAGATTGGCAGCAACACCTCCATCATCGGCAAGGACGCCAAC
GCCATCCTCGAGGGATTCGGAGTTCTCGTCAAGGAGAAGGAGAACGTTAT
CATCCGTAACCTCGGAGTCTCCAAGGTCCTTGCTGACAACGGCGATGCCA
TTGGTGTCCAGTACTCCAACAACGTCTGGATCGACCACTGCGATGTCTCC
TCCGACCGTGACCACGACAAGGACTACTACGACGGTCTGATTGACATTAC
CCACGGCTCCGACTACGTGACCGTCTCCAACACCTTCATCCACGACCACT
GGAAGGCCTCCCTGGTCGGCCACTCCGACAGCAACGAGGACGAGGACAGC
GGCCACCTCACCGTCACCTACGCCAACAACTACTGGTACAACATCAACTC
CCGCGCTCCCTCTTTCCGCTTCGGTACCGGCCACGTCTACAACAGCTACT
ACCTGGACGTCAGCGACGGCATCAACACCCGTGACGGCGCCCAGCTGCTC
GTCGAGTCCAACCAGTTCGTCGACTCCAAGAAGGCTCTCTACTCCACCGA
CGATGGCTACGCCGTCTCCAACGACAACGACTTCGGTGATTCTGAGAACA
CTGCCGAGGAGGGTACCCTGACTTCCATGCCTTATGACTACACCCTTCTT
GGCTCCGCCAACGTTAAGGCTGCTGTCGTCGGCACTGCCGGTCAGACTCT
TACTTTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-20) |
| Note | CAZy:PL1_4 |
| Note | CAZy:PL1_8 |
| Note | CAZy:PL1_11 |
| Note | CAZy:PL1_1 |
| Note | CAZy:PL1_12 |
| Note | CAZy:PL1_6 |
| Note | CAZy:PL1_5 |
| Note | CAZy:PL1_10 |
| Note | CAZy:PL1 |
| Note | CAZy:PL1_9 |
| Note | CAZy:PL1_7 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR002022 |
| DBxref | PFAM:PF00544 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An10 | supercontig | An10:223194..224372 + |
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