|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An10:225429..226803- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006486-T1 ID=CBS51388_006486-T1|Name=CBS51388_006486-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1375bp|location=Sequence derived from alignment at An10:225429..226803- (Aspergillus niger CBS 513.88)
ATGGGCATACAGAATGAGGGACTAGAAGCTCCAAACGAGCTGTCCAACGA
GCATGACGAACACCTCCAGCCACCAACCGAGGCTAGTTCAGAGACACAGC
CGATGCCCAACGGAGGACTGGAAGGTTGGCTCAGTGTACTGGCGGGCTTC
TGCGTCTTTGTCAACTCCTGGTACCTACACCCATCACTAATCCCCAAACA
CAGTCCTAACATCCAGCAGGGGCCTTATCAGCTGCTATGGCGCTTTCCAG
GAATTCTACCAAACCGTCCTCCTCCCGGACGAATCACCTTCCACGATCTC
CTGGATCGGTAGTATCCAAGCCACCCTGATCGTGATGGTCGGTATGGTGA
CCGGCCCCCTAGTGGACTCAGGCTACCTCCGACCCTTGATCGTCAGCGGA
TCCTTCCTAGTCGTGTTCGGGATGATGATGCTCAGCCTAGCAACAGAATA
CTACCAGGTTCTTCTGGCACAGGGCTTCTGCGTCGGAATAGGTGGTGGCA
TCACCTATATCCCAGCAATGGTAGTCATCTCCTCGCATTTCACCACCAAG
CGCCCCATCGCCATCGGCTGCGCTTCTATCGGATCCAGCGTCGGTAGCGT
CATATTTCCAATCCTCTTCCGCCAAGTCCAACCCATCATCAACTTCGCCT
GGAGCGTCCGCTGCATCGCATTCATTAACCTCTTCCTCGCCCTCATTACC
TGCGCTATCCTTTGCCGTCGACCAGGCAAGAAAACCCGCACGAGAAGCCT
CATCGAACTCAAAGCCTTGACTCACCTCCCCTTCATGCTTCTCTCACTCT
CTATGACCTGCGTCATGCTCGCTTACTACGTCCCTATCTTCTACATCGCC
ACCTACGCCCGCTCCGCTCTCAACACCCCCACCAGTCTCTCCTTCTACCT
CGTCTCCATCACAAACGGCGCCTCCGCCTTCGGCCGCACAGTACCTTACT
TCCTCGCCTCGGGAGGCACCCGCATCAAGCCCATCTTCATCCTGATCGCC
TTCGTCGCGGCAGCCGCAGTAGCCATGTTCACCTGGATCGCGACGACAAA
CACAGCGGGATTCATCGTCTGGGCCTGTTACTGGGGTTTTGTGAGCGGGG
TGCTGGTCACAGCTCCGACTTCCATTGTCGCCCATAAAGCATTCTGTCCT
GACAGTGACTTCCTCGGGACGAGAATGGGCATGATGTGGGGGATTAGTTC
GTTTGGGTCGTTGGTGGGCACGCCTGTTGCAGGGGCGTTGGTGAACTTGG
AAACGGCGGACTTTGTTCGTGCGCAGGTGTTTTCGGGTTGCTTGATGGTT
GGGGCGGTCGTGTTGCAGGTTTGGCCGGTTGTTTGTGTGGTTAGAGTGGA
TAGAGGGGTGGGGAAGGTGCAATAG back to topCoding sequence (CDS) from alignment at An10:225429..226803- >CBS51388_006486-T1 ID=CBS51388_006486-T1|Name=CBS51388_006486-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2658bp|location=Sequence derived from alignment at An10:225429..226803- (Aspergillus niger CBS 513.88)
CAGGGGCCTTATCAGCTGCTATGGCGCTTTCCAGGAATTCTACCAAACCG
TCCTCCTCCCGGACGAATCACCTTCCACGATCTCCTGGATCGGTAGTATC
CAAGCCACCCTGATCGTGATGGTCGGTATGGTGACCGGCCCCCTAGTGGA
CTCAGGCTACCTCCGACCCTTGATCGTCAGCGGATCCTTCCTAGTCGTGT
TCGGGATGATGATGCTCAGCCTAGCAACAGAATACTACCAGGTTCTTCTG
GCACAGGGCTTCTGCGTCGGAATAGGTGGTGGCATCACCTATATCCCAGC
AATGGTAGTCATCTCCTCGCATTTCACCACCAAGCGCCCCATCGCCATCG
GCTGCGCTTCTATCGGATCCAGCGTCGGTAGCGTCATATTTCCAATCCTC
TTCCGCCAAGTCCAACCCATCATCAACTTCGCCTGGAGCGTCCGCTGCAT
CGCATTCATTAACCTCTTCCTCGCCCTCATTACCTGCGCTATCCTTTGCC
GTCGACCAGGCAAGAAAACCCGCACGAGAAGCCTCATCGAACTCAAAGCC
TTGACTCACCTCCCCTTCATGCTTCTCTCACTCTCTATGACCTGCGTCAT
GCTCGCTTACTACGTCCCTATCTTCTACATCGCCACCTACGCCCGCTCCG
CTCTCAACACCCCCACCAGTCTCTCCTTCTACCTCGTCTCCATCACAAAC
GGCGCCTCCGCCTTCGGCCGCACAGTACCTTACTTCCTCGCCTCGGGAGG
CACCCGCATCAAGCCCATCTTCATCCTGATCGCCTTCGTCGCGGCAGCCG
CAGTAGCCATGTTCACCTGGATCGCGACGACAAACACAGCGGGATTCATC
GTCTGGGCCTGTTACTGGGGTTTTGTGAGCGGGGTGCTGGTCACAGCTCC
GACTTCCATTGTCGCCCATAAAGCATTCTGTCCTGACAGTGACTTCCTCG
GGACGAGAATGGGCATGATGTGGGGGATTAGTTCGTTTGGGTCGTTGGTG
GGCACGCCTGTTGCAGGGGCGTTGGTGAACTTGGAAACGGCGGACTTTGT
TCGTGCGCAGGTGTTTTCGGGTTGCTTGATGGTTGGGGCGGTCGTGTTGC
AGGTTTGGCCGGTTGTTTGTGTGGTTAGAGTGGATAGAGGGGTGGGGAAG
GTGCAATAGATGGGCATACAGAATGAGGGACTAGAAGCTCCAAACGAGCT
GTCCAACGAGCATGACGAACACCTCCAGCCACCAACCGAGGCTAGTTCAG
AGACACAGCCGATGCCCAACGGAGGACTGGAAGGTTGGCTCAGTGTACTG
GCGGGCTTCTGCGTCTTTGTCAACTCCTGCAGGGGCCTTATCAGCTGCTA
TGGCGCTTTCCAGGAATTCTACCAAACCGTCCTCCTCCCGGACGAATCAC
CTTCCACGATCTCCTGGATCGGTAGTATCCAAGCCACCCTGATCGTGATG
GTCGGTATGGTGACCGGCCCCCTAGTGGACTCAGGCTACCTCCGACCCTT
GATCGTCAGCGGATCCTTCCTAGTCGTGTTCGGGATGATGATGCTCAGCC
TAGCAACAGAATACTACCAGGTTCTTCTGGCACAGGGCTTCTGCGTCGGA
ATAGGTGGTGGCATCACCTATATCCCAGCAATGGTAGTCATCTCCTCGCA
TTTCACCACCAAGCGCCCCATCGCCATCGGCTGCGCTTCTATCGGATCCA
GCGTCGGTAGCGTCATATTTCCAATCCTCTTCCGCCAAGTCCAACCCATC
ATCAACTTCGCCTGGAGCGTCCGCTGCATCGCATTCATTAACCTCTTCCT
CGCCCTCATTACCTGCGCTATCCTTTGCCGTCGACCAGGCAAGAAAACCC
GCACGAGAAGCCTCATCGAACTCAAAGCCTTGACTCACCTCCCCTTCATG
CTTCTCTCACTCTCTATGACCTGCGTCATGCTCGCTTACTACGTCCCTAT
CTTCTACATCGCCACCTACGCCCGCTCCGCTCTCAACACCCCCACCAGTC
TCTCCTTCTACCTCGTCTCCATCACAAACGGCGCCTCCGCCTTCGGCCGC
ACAGTACCTTACTTCCTCGCCTCGGGAGGCACCCGCATCAAGCCCATCTT
CATCCTGATCGCCTTCGTCGCGGCAGCCGCAGTAGCCATGTTCACCTGGA
TCGCGACGACAAACACAGCGGGATTCATCGTCTGGGCCTGTTACTGGGGT
TTTGTGAGCGGGGTGCTGGTCACAGCTCCGACTTCCATTGTCGCCCATAA
AGCATTCTGTCCTGACAGTGACTTCCTCGGGACGAGAATGGGCATGATGT
GGGGGATTAGTTCGTTTGGGTCGTTGGTGGGCACGCCTGTTGCAGGGGCG
TTGGTGAACTTGGAAACGGCGGACTTTGTTCGTGCGCAGGTGTTTTCGGG
TTGCTTGATGGTTGGGGCGGTCGTGTTGCAGGTTTGGCCGGTTGTTTGTG
TGGTTAGAGTGGATAGAGGGGTGGGGAAGGTGCAATAGATGGGCATACAG
AATGAGGGACTAGAAGCTCCAAACGAGCTGTCCAACGAGCATGACGAACA
CCTCCAGCCACCAACCGAGGCTAGTTCAGAGACACAGCCGATGCCCAACG
GAGGACTGGAAGGTTGGCTCAGTGTACTGGCGGGCTTCTGCGTCTTTGTC
AACTCCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An10 | supercontig | An10:225429..226803 - |
|
