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CBS51388_006488-T1, CBS51388_006488-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006488-T1
Unique NameCBS51388_006488-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An10:230120..231781+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006488-T1 ID=CBS51388_006488-T1|Name=CBS51388_006488-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1662bp|location=Sequence derived from alignment at An10:230120..231781+ (Aspergillus niger CBS 513.88)
ATGAAGGATGTCAACCCCGACGAGCAGGACCATTGGGGTGGAACACCATT
ATGCATTGCAGCACAATACGGGCATCTAGAGGTAGTCAAGTTGTTGCTTG
CCACCAAGCGGGTGAATCCAGGTCATCGAGACAGCTGGGGAGACACCCCG
GCCATCAGAGCAGCAGCAGGAAGGTATGAGAAAATAGTGATGTTATTACT
CAATACTGAAGGTGTCGATCCTCATTCCCAGAATAGTCATGGCTGGACCA
TCCTGTCATGGGCGATAATACGTGGTCTGCAACAGGTAGTCGAATTCCTG
CTTGCTACCCAGGGAATTGACCCAGATCTTAGAGACTCTGACGGATTTAC
TCCATTGTCCAGAGCAGCAGGGGCTGGAAGAAAGCAAGTAGTTTCACTAC
TGCTCGGCACGGGAAAGGTGAACCCCAATTCTCTAGCGAATTCCCGAGAG
ACACCGCTGTCCATCTCCGCAAACTATGGCTATGCGGCAATCGTCAAGAT
GCTTATTACCGCAGGTGCAAATATCCATACTCGAGACGAAATGGGAGCGA
CGGCACTCATGTATGGCGCGAAATCTGGAAATCTGGAACTCGTCGAAGCG
CTTCTTGCTGCAGGTGCAGGCATTCACATCCGAGATAATGACGGTGCAAC
TGCCCTCATATATGCTGCGGAATACGGAAAGCTCAAAATTGTTGAAACAC
TTCTGGCTATAGGTGCAGATGTTCACATTGCAGATAACTTTGGAGAGACA
GTACTCATACACGCTGTTGGATCCGGAAATGCGAAAGTGGTTGAAGCGCT
TGTTGCTGCAGGCGCAGAAATCAATATGGGAGATAACTGGGGACAAACAC
CACTTTTTCACTCTGTACTGCATAGAGGCTTGGAGGTTCTTAGCTTCCTT
ATTGCTAAAGGTGCAGATCTTGACGTCCAAACTACTGATGGGACGACAGC
ACTCACTCAGGCTTCGAATTATGGATATGATGTGAAAATAGTCAAAGCGC
TTATTGCTGCAGGAGCAGGACTTGACATCAGAGACAACAGCAGTGATGGA
TATGGAGGCACACCCCTTTTGAATGCGGTTAATTGTAAGGCGGAAGTAGT
GGTTGAAGCTCTACTTTCTGCAGGCGCCATGCCTGATATCGGGAATGGCC
GAGGACAGACCCCCCTTGCGAGGGCAGCCGTGGAGGGACATCCGAAGATA
TTTAGGCTTCTATTAGAAGCAGGAGCAAATCCACACATTGCCGATCGTGA
AGGATGGACTCCGTTGGCATACCTATCACGAGTTCGTCAGGACAATGTCC
AACACCTCAAATTACTTCTTGCTGCGGGTGTGAATGTTAATGTCAAAACC
CAGGATGGATGGACGCCATTGGCGCTAGCAGCTAACTGCGGTAGTCTGGA
GGCGGTGAAGATTTTACTTGCAGCGGGGGCAGACCCAAACTCTGGAACAC
CCCTAACAAAAGCAGCGTTTCACGAACACCTGGAGATTGTGAAAACACTT
CTTGCCGCAGAAGGCATCGATACGGATTTGAAGGGTAGTGACTGGCTGCC
AGCGCTGTGGATAGACAGACAGCCGGGCTATTCAAGAGCGGCGGACTTGA
TACATCAGCACAGAATGCTTAAAATATGGTTTAAAAAAATGATGGGTGGG
TGTAATCCTTAA
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Coding sequence (CDS) from alignment at An10:230120..231781+

>CBS51388_006488-T1 ID=CBS51388_006488-T1|Name=CBS51388_006488-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1662bp|location=Sequence derived from alignment at An10:230120..231781+ (Aspergillus niger CBS 513.88)
ATGAAGGATGTCAACCCCGACGAGCAGGACCATTGGGGTGGAACACCATT
ATGCATTGCAGCACAATACGGGCATCTAGAGGTAGTCAAGTTGTTGCTTG
CCACCAAGCGGGTGAATCCAGGTCATCGAGACAGCTGGGGAGACACCCCG
GCCATCAGAGCAGCAGCAGGAAGGTATGAGAAAATAGTGATGTTATTACT
CAATACTGAAGGTGTCGATCCTCATTCCCAGAATAGTCATGGCTGGACCA
TCCTGTCATGGGCGATAATACGTGGTCTGCAACAGGTAGTCGAATTCCTG
CTTGCTACCCAGGGAATTGACCCAGATCTTAGAGACTCTGACGGATTTAC
TCCATTGTCCAGAGCAGCAGGGGCTGGAAGAAAGCAAGTAGTTTCACTAC
TGCTCGGCACGGGAAAGGTGAACCCCAATTCTCTAGCGAATTCCCGAGAG
ACACCGCTGTCCATCTCCGCAAACTATGGCTATGCGGCAATCGTCAAGAT
GCTTATTACCGCAGGTGCAAATATCCATACTCGAGACGAAATGGGAGCGA
CGGCACTCATGTATGGCGCGAAATCTGGAAATCTGGAACTCGTCGAAGCG
CTTCTTGCTGCAGGTGCAGGCATTCACATCCGAGATAATGACGGTGCAAC
TGCCCTCATATATGCTGCGGAATACGGAAAGCTCAAAATTGTTGAAACAC
TTCTGGCTATAGGTGCAGATGTTCACATTGCAGATAACTTTGGAGAGACA
GTACTCATACACGCTGTTGGATCCGGAAATGCGAAAGTGGTTGAAGCGCT
TGTTGCTGCAGGCGCAGAAATCAATATGGGAGATAACTGGGGACAAACAC
CACTTTTTCACTCTGTACTGCATAGAGGCTTGGAGGTTCTTAGCTTCCTT
ATTGCTAAAGGTGCAGATCTTGACGTCCAAACTACTGATGGGACGACAGC
ACTCACTCAGGCTTCGAATTATGGATATGATGTGAAAATAGTCAAAGCGC
TTATTGCTGCAGGAGCAGGACTTGACATCAGAGACAACAGCAGTGATGGA
TATGGAGGCACACCCCTTTTGAATGCGGTTAATTGTAAGGCGGAAGTAGT
GGTTGAAGCTCTACTTTCTGCAGGCGCCATGCCTGATATCGGGAATGGCC
GAGGACAGACCCCCCTTGCGAGGGCAGCCGTGGAGGGACATCCGAAGATA
TTTAGGCTTCTATTAGAAGCAGGAGCAAATCCACACATTGCCGATCGTGA
AGGATGGACTCCGTTGGCATACCTATCACGAGTTCGTCAGGACAATGTCC
AACACCTCAAATTACTTCTTGCTGCGGGTGTGAATGTTAATGTCAAAACC
CAGGATGGATGGACGCCATTGGCGCTAGCAGCTAACTGCGGTAGTCTGGA
GGCGGTGAAGATTTTACTTGCAGCGGGGGCAGACCCAAACTCTGGAACAC
CCCTAACAAAAGCAGCGTTTCACGAACACCTGGAGATTGTGAAAACACTT
CTTGCCGCAGAAGGCATCGATACGGATTTGAAGGGTAGTGACTGGCTGCC
AGCGCTGTGGATAGACAGACAGCCGGGCTATTCAAGAGCGGCGGACTTGA
TACATCAGCACAGAATGCTTAAAATATGGTTTAAAAAAATGATGGGTGGG
TGTAATCCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006488CBS51388_006488Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006488-T1.exon1CBS51388_006488-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006488-T1.cdsCBS51388_006488-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006488-T1CBS51388_006488-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An10supercontigAn10:230120..231781 +
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