You are here

Home

CBS51388_006491-T1, CBS51388_006491-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006491-T1
Unique NameCBS51388_006491-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An10:243683..245428+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006491-T1 ID=CBS51388_006491-T1|Name=CBS51388_006491-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1746bp|location=Sequence derived from alignment at An10:243683..245428+ (Aspergillus niger CBS 513.88)
ATGCGCAAGTCCACTCGCGCAGTTGTCGCTGCTCTGGCAGCAGCCACTGC
CCAGGCTACTTCCCTGTCCGATCTCTGCACTGTTTCCAATGTTCAGTCCG
CCCTTCCTTCTAACGGCACCCTCCTGGGCATCGACTTGATCCCCTCTGCA
GTCACTGCCAACACTGTCACCGATGCCAGCTCTGGCATGGGCAGCTCCGG
CTCCTACGACTACTGCAACGTCACTGTCACCTACACCCACACCGGCAAGG
GTGACAAGGTTGTCGTAAAGTACGCCCTGCCCGCTCCTTCTGATTTCAAG
AACCGTTTCTACGTCGCCGGTGGTGGTGGTTTCTCCCTCTCCAGCGATGC
TACTGGCGGTCTCGAGTACGGTGCTGCCTCGGGTGCCACCGATGCCGGCT
ACGACGCCTTCTCCTACAGCTACGATGAAGTTGTTCTGTACGGCAACGGC
TCGATCAACTGGGATGCTACATACATGTTCAGCTACCAGGCTCTGGGTGA
GATGACCAAGATCGCCAAGCCCCTGACCCGCGGCTTCTACGGCCTCTCCA
GCGACAAGAAGATCTACACCTACTACGAGGGCTGTTCCGATGGTGGTCGT
GAGGGTATGAGTCAGGTTCAGCGCTGGGGAGATGAATATGACGGTGTTAT
TGCCGGTGCCCCTGCCTTCCGCTTTGCTCAGCAGCAGGTCCACCACGTCT
TCCCTGCCACCATTGAACACACCATGGATTACTACCCTCCCCCTTGCGAG
CTTGACAAGATCGTCAACGCTACCATTGAAGCCTGTGACCCTCTCGACGG
CCGTACCGATGGCGTTGTTTCCCGTACTGACCTCTGCATGCTGAACTTCA
ATCTCACCTCTATTATCGGCGAGTCCTACTATTGCGCTGAACAAAACTAC
ACCTCCCTGGGCTTCGGCTTCAGCAAGCGCGCCGAAGGCAGCACTACCAG
CTACCAGCCTGCCCAGAACGGCAGCGTCACCGCCGAAGGTGTTACCCTTG
CCCAGGCCATCTACGACGGTCTCCACGACTCTAACGGCAAGCGCGCCTAC
CTCTCGTGGCAGATCGCCGCCGAGCTGTCCGACGGTGACACGGAGTACGA
TTCCACCACTGACTCCTGGACTCTGAGCATCCCCTCCACCGGCGGCGAGT
ACGTGACCAAGTTCGTGCAGCTCCTCAATATTGACAACCTGGAGAACCTC
GATAACGTCACCTACGACACCCTGGTGGACTGGATGAACATCGGCATGAT
CCGCTACATTGACAGTCTCCAGACCACCGTCGTCGACCTCACCACCTTCC
AGGAGTCCGGTGGTAAGATGATCCACTACCATGGTGAATCCGACCCCAGT
ATCCCGACCGCCTCGTCCGTCCACTACTGGCAGGGCGTCCGTCAGGCCAT
GTACCCCAACACCTCCTACACCCAGTCCCTGAAGGAGATGTCCGACTGGT
ACCAGCTTTACCTCGTCCCTGGCGCTGCCCACTGCGGTACTAACGACCTC
CAGCCGGGTCCTTACCCCGAGGACAACATGGAGATCATGATCGACTGGGT
TGAGAACGGCAACAAGCCTTCCCGCCTCAACGCCACCGTCTCCTCCGGTA
CCTATGCTGGTGAGACCCAGATGCTCTGCCAGTGGCCTTCCCGTCCCCTC
TGGACCAGCAACTCCAGCTTCTCTTGTGTCCATGACTCCAAGTCTCTTGC
TACTTGGGACTACACTTTTGACGCTTTCAAGATGCCCGTTTTTTAA
back to top

Coding sequence (CDS) from alignment at An10:243683..245428+

>CBS51388_006491-T1 ID=CBS51388_006491-T1|Name=CBS51388_006491-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1746bp|location=Sequence derived from alignment at An10:243683..245428+ (Aspergillus niger CBS 513.88)
ATGCGCAAGTCCACTCGCGCAGTTGTCGCTGCTCTGGCAGCAGCCACTGC
CCAGGCTACTTCCCTGTCCGATCTCTGCACTGTTTCCAATGTTCAGTCCG
CCCTTCCTTCTAACGGCACCCTCCTGGGCATCGACTTGATCCCCTCTGCA
GTCACTGCCAACACTGTCACCGATGCCAGCTCTGGCATGGGCAGCTCCGG
CTCCTACGACTACTGCAACGTCACTGTCACCTACACCCACACCGGCAAGG
GTGACAAGGTTGTCGTAAAGTACGCCCTGCCCGCTCCTTCTGATTTCAAG
AACCGTTTCTACGTCGCCGGTGGTGGTGGTTTCTCCCTCTCCAGCGATGC
TACTGGCGGTCTCGAGTACGGTGCTGCCTCGGGTGCCACCGATGCCGGCT
ACGACGCCTTCTCCTACAGCTACGATGAAGTTGTTCTGTACGGCAACGGC
TCGATCAACTGGGATGCTACATACATGTTCAGCTACCAGGCTCTGGGTGA
GATGACCAAGATCGCCAAGCCCCTGACCCGCGGCTTCTACGGCCTCTCCA
GCGACAAGAAGATCTACACCTACTACGAGGGCTGTTCCGATGGTGGTCGT
GAGGGTATGAGTCAGGTTCAGCGCTGGGGAGATGAATATGACGGTGTTAT
TGCCGGTGCCCCTGCCTTCCGCTTTGCTCAGCAGCAGGTCCACCACGTCT
TCCCTGCCACCATTGAACACACCATGGATTACTACCCTCCCCCTTGCGAG
CTTGACAAGATCGTCAACGCTACCATTGAAGCCTGTGACCCTCTCGACGG
CCGTACCGATGGCGTTGTTTCCCGTACTGACCTCTGCATGCTGAACTTCA
ATCTCACCTCTATTATCGGCGAGTCCTACTATTGCGCTGAACAAAACTAC
ACCTCCCTGGGCTTCGGCTTCAGCAAGCGCGCCGAAGGCAGCACTACCAG
CTACCAGCCTGCCCAGAACGGCAGCGTCACCGCCGAAGGTGTTACCCTTG
CCCAGGCCATCTACGACGGTCTCCACGACTCTAACGGCAAGCGCGCCTAC
CTCTCGTGGCAGATCGCCGCCGAGCTGTCCGACGGTGACACGGAGTACGA
TTCCACCACTGACTCCTGGACTCTGAGCATCCCCTCCACCGGCGGCGAGT
ACGTGACCAAGTTCGTGCAGCTCCTCAATATTGACAACCTGGAGAACCTC
GATAACGTCACCTACGACACCCTGGTGGACTGGATGAACATCGGCATGAT
CCGCTACATTGACAGTCTCCAGACCACCGTCGTCGACCTCACCACCTTCC
AGGAGTCCGGTGGTAAGATGATCCACTACCATGGTGAATCCGACCCCAGT
ATCCCGACCGCCTCGTCCGTCCACTACTGGCAGGGCGTCCGTCAGGCCAT
GTACCCCAACACCTCCTACACCCAGTCCCTGAAGGAGATGTCCGACTGGT
ACCAGCTTTACCTCGTCCCTGGCGCTGCCCACTGCGGTACTAACGACCTC
CAGCCGGGTCCTTACCCCGAGGACAACATGGAGATCATGATCGACTGGGT
TGAGAACGGCAACAAGCCTTCCCGCCTCAACGCCACCGTCTCCTCCGGTA
CCTATGCTGGTGAGACCCAGATGCTCTGCCAGTGGCCTTCCCGTCCCCTC
TGGACCAGCAACTCCAGCTTCTCTTGTGTCCATGACTCCAAGTCTCTTGC
TACTTGGGACTACACTTTTGACGCTTTCAAGATGCCCGTTTTTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006491CBS51388_006491Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006491-T1.exon1CBS51388_006491-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006491-T1.cdsCBS51388_006491-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006491-T1CBS51388_006491-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR011118
DBxrefPFAM:PF07519
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An10supercontigAn10:243683..245428 +
Powered by Drupal