|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:70103..70906- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006521-T1 ID=CBS51388_006521-T1|Name=CBS51388_006521-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=804bp|location=Sequence derived from alignment at An11:70103..70906- (Aspergillus niger CBS 513.88)
ATGCCAAACAGTCAGTCATCTGTCGAGGACCGCTTGCGGCGTCTCATGCC
GAGCCTCCCGGTATATACCGAAGGCACGCACTATCAAGACTGTCTCGAAC
TATACAACCATGCGTTGAGAAAGAAACCACTGGTCTGCGCTCGGCCGCGG
ACAGAAGAAGAGGTCTCCCGCTTGGTTCAATTTTGCGCCGAACAGAAGAT
CCCCTTTGCTGTTCGTTCAGGTGGTCACGACTTCTTCGGCCGCTCCGTGA
TTCACAATGGCATTCTTATCGACATGCGTGACATGGACACGGTGAGTGTT
GTGTCGGACCGAGCTAGCGCACGCGTTGGTGGCGGAGTGATTGCCGGCCA
CCTGCAGGAAACCCTCCAATCTCACGGCTTGTTCACTCCTACTGGACAGG
CAAAGTCTGTCGGCTATGTCTCTTGGGCGTGTGGCGGAGGGTACGGCTTC
TATGTTGGAACATACGGGTTTGGGGTGGATCAAATACTGGGAGCTCGAGT
GGTTTTGGCCGGGGGCAGTGTGATTGACACCAACGAAGATTCAGAATTAC
TATGGGCACTCCGCGGCGCTGGGGCTGGCACGTTCGGCATTGTCGTGGAG
CTTCGCGTGAAGGTCTACCCAGTGCCCAAACTATACGCGGGCTTCCTAGC
CTTCCCCTTGGCCGATGCCGCGACGGTCATGGGCAGGATTGAGAGGCTTT
TAGATGATGACTTACCTGATGAGTTCAGCGGAGATGCCATAGTTGTAAAT
CCTGAAATGGCTCCAACCCCGGTAGCCGAGCCTTGTTTTGTTATGTTTTG
GTGA back to topCoding sequence (CDS) from alignment at An11:70103..70906- >CBS51388_006521-T1 ID=CBS51388_006521-T1|Name=CBS51388_006521-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=804bp|location=Sequence derived from alignment at An11:70103..70906- (Aspergillus niger CBS 513.88)
ATGCCAAACAGTCAGTCATCTGTCGAGGACCGCTTGCGGCGTCTCATGCC
GAGCCTCCCGGTATATACCGAAGGCACGCACTATCAAGACTGTCTCGAAC
TATACAACCATGCGTTGAGAAAGAAACCACTGGTCTGCGCTCGGCCGCGG
ACAGAAGAAGAGGTCTCCCGCTTGGTTCAATTTTGCGCCGAACAGAAGAT
CCCCTTTGCTGTTCGTTCAGGTGGTCACGACTTCTTCGGCCGCTCCGTGA
TTCACAATGGCATTCTTATCGACATGCGTGACATGGACACGGTGAGTGTT
GTGTCGGACCGAGCTAGCGCACGCGTTGGTGGCGGAGTGATTGCCGGCCA
CCTGCAGGAAACCCTCCAATCTCACGGCTTGTTCACTCCTACTGGACAGG
CAAAGTCTGTCGGCTATGTCTCTTGGGCGTGTGGCGGAGGGTACGGCTTC
TATGTTGGAACATACGGGTTTGGGGTGGATCAAATACTGGGAGCTCGAGT
GGTTTTGGCCGGGGGCAGTGTGATTGACACCAACGAAGATTCAGAATTAC
TATGGGCACTCCGCGGCGCTGGGGCTGGCACGTTCGGCATTGTCGTGGAG
CTTCGCGTGAAGGTCTACCCAGTGCCCAAACTATACGCGGGCTTCCTAGC
CTTCCCCTTGGCCGATGCCGCGACGGTCATGGGCAGGATTGAGAGGCTTT
TAGATGATGACTTACCTGATGAGTTCAGCGGAGATGCCATAGTTGTAAAT
CCTGAAATGGCTCCAACCCCGGTAGCCGAGCCTTGTTTTGTTATGTTTTG
GTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_11.2 |
| Note | antiSMASH:Cluster_11.3 |
| Note | SMCOG1138:FAD linked oxidase domain protein |
| Note | CAZy:AA7 |
| DBxref | InterPro:IPR036318 |
| DBxref | InterPro:IPR016166 |
| DBxref | InterPro:IPR016167 |
| DBxref | InterPro:IPR016169 |
| DBxref | InterPro:IPR006094 |
| DBxref | PFAM:PF01565 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:70103..70906 - |
|
