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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:133806..134704+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006544-T1 ID=CBS51388_006544-T1|Name=CBS51388_006544-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=899bp|location=Sequence derived from alignment at An11:133806..134704+ (Aspergillus niger CBS 513.88)
ATGGCCAGCGTCGTCGAAGCCGCAAAGCGCGCAGCCGGTAAGGCTGCCGT
CGAGAATCACTACCCCAAGGACGCCAAATACGTCGGCATTGGCAGTGGTT
CGACCATTGTCTATGTGGTCGAGGCCATCAAGGAGTCCGGAGTAGACACC
TCCGCCACCAAATACGTCCCCACTGGCTTCCAGTCCAAGCAGCTGATTGT
CAACGCTGGTCTGACCGCAGTGGACTTCGATGCCCTCCCCGAAGGCACGG
TTCTGGATGTTGCCTTCGATGGTGCCGACGAGGTCGACGACGAGCTGAAC
CTGATCAAGGGTGGTGGTGCTTGTCTCTTCCAGGAGAAGATCGTGGCTCT
TCAGGCCAAGGAGTTCATTTGTGTGGCTGGTGCGTATATGTTACGCTGAG
CGATAGTGTCTGGCGCTTTCTATAGAGGGCATGCGCACTAACCCCCCGAT
TGATAGACTCCCGCAAGCTCCAGTCCCGCCTCCTCACTGGTTGGAAGTAC
ATCCCCATCGAAGTCGCTCCTATTGCGGCCCGTCGCGTTCTCGGTGCTCT
GAAAGAGATTGGCAGCATTGATCCCGCTGTCCGCGTCAACTCTGATGCCA
AGCAAGGCCCATTGAAGACCGACCAGGCCTTCTTCATCATCGACGCTCCC
TTCAAGACTCTGCTGACCCAGGCAGACGTGGCTGCCGGAAAGGACGGCAG
TGGCAAGGACGGCGTGTGGGAGGTTCACGCCCTCTCTCAGGCGATCAAGC
AGATTCCCGGTGTTCTCGACGTGGGTATCTTCTCTGGCATGACCGGCCCT
CAGGCGCAGGCGCTCGGTGGTGTCGGAGGCCAGAAGCCTATTGCTGCCTA
CTTCGGTATGCCTGACGGTTCGGTGTCCGTCAGAAAGGCAGCTGCTTAA back to topCoding sequence (CDS) from alignment at An11:133806..134704+ >CBS51388_006544-T1 ID=CBS51388_006544-T1|Name=CBS51388_006544-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1644bp|location=Sequence derived from alignment at An11:133806..134704+ (Aspergillus niger CBS 513.88)
ATGGCCAGCGTCGTCGAAGCCGCAAAGCGCGCAGCCGGTAAGGCTGCCGT
CGAGAATCACTACCCCAAGGACGCCAAATACGTCGGCATTGGCAGTGGTT
CGACCATTGTCTATGTGGTCGAGGCCATCAAGGAGTCCGGAGTAGACACC
TCCGCCACCAAATACGTCCCCACTGGCTTCCAGTCCAAGCAGCTGATTGT
CAACGCTGGTCTGACCGCAGTGGACTTCGATGCCCTCCCCGAAGGCACGG
TTCTGGATGTTGCCTTCGATGGTGCCGACGAGGTCGACGACGAGCTGAAC
CTGATCAAGGGTGGTGGTGCTTGTCTCTTCCAGGAGAAGATCGTGGCTCT
TCAGGCCAAGGAGTTCATTTGTGTGGCTGACTCCCGCAAGCTCCAGTCCC
GCCTCCTCACTGGTTGGAAGTACATCCCCATCGAAGTCGCTCCTATTGCG
GCCCGTCGCGTTCTCGGTGCTCTGAAAGAGATTGGCAGCATTGATCCCGC
TGTCCGCGTCAACTCTGATGCCAAGCAAGGCCCATTGAAGACCGACCAGG
CCTTCTTCATCATCGACGCTCCCTTCAAGACTCTGCTGACCCAGGCAGAC
GTGGCTGCCGGAAAGGACGGCAGTGGCAAGGACGGCGTGTGGGAGGTTCA
CGCCCTCTCTCAGGCGATCAAGCAGATTCCCGGTGTTCTCGACGTGGGTA
TCTTCTCTGGCATGACCGGCCCTCAGGCGCAGGCGCTCGGTGGTGTCGGA
GGCCAGAAGCCTATTGCTGCCTACTTCGGTATGCCTGACGGTTCGGTGTC
CGTCAGAAAGGCAGCTGCTTAAATGGCCAGCGTCGTCGAAGCCGCAAAGC
GCGCAGCCGGTAAGGCTGCCGTCGAGAATCACTACCCCAAGGACGCCAAA
TACGTCGGCATTGGCAGTGGTTCGACCATTGTCTATGTGGTCGAGGCCAT
CAAGGAGTCCGGAGTAGACACCTCCGCCACCAAATACGTCCCCACTGGCT
TCCAGTCCAAGCAGCTGATTGTCAACGCTGGTCTGACCGCAGTGGACTTC
GATGCCCTCCCCGAAGGCACGGTTCTGGATGTTGCCTTCGATGGTGCCGA
CGAGGTCGACGACGAGCTGAACCTGATCAAGGGTGGTGGTGCTTGTCTCT
TCCAGGAGAAGATCGTGGCTCTTCAGGCCAAGGAGTTCATTTGTGTGGCT
GACTCCCGCAAGCTCCAGTCCCGCCTCCTCACTGGTTGGAAGTACATCCC
CATCGAAGTCGCTCCTATTGCGGCCCGTCGCGTTCTCGGTGCTCTGAAAG
AGATTGGCAGCATTGATCCCGCTGTCCGCGTCAACTCTGATGCCAAGCAA
GGCCCATTGAAGACCGACCAGGCCTTCTTCATCATCGACGCTCCCTTCAA
GACTCTGCTGACCCAGGCAGACGTGGCTGCCGGAAAGGACGGCAGTGGCA
AGGACGGCGTGTGGGAGGTTCACGCCCTCTCTCAGGCGATCAAGCAGATT
CCCGGTGTTCTCGACGTGGGTATCTTCTCTGGCATGACCGGCCCTCAGGC
GCAGGCGCTCGGTGGTGTCGGAGGCCAGAAGCCTATTGCTGCCTACTTCG
GTATGCCTGACGGTTCGGTGTCCGTCAGAAAGGCAGCTGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009052 | pentose-phosphate shunt, non-oxidative branch |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004751 | ribose-5-phosphate isomerase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092641UM |
| DBxref | InterPro:IPR037171 |
| DBxref | InterPro:IPR004788 |
| DBxref | PFAM:PF06026 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:133806..134704 + |
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