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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:134941..136134- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006545-T1 ID=CBS51388_006545-T1|Name=CBS51388_006545-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1194bp|location=Sequence derived from alignment at An11:134941..136134- (Aspergillus niger CBS 513.88)
ATGGCGTCAAGTAAGTCGCGAATTGTTTCCATGGCAATCCTCTTCCACTG
ACTAGTGTTAGATCAATTCTCTGTCGCATCCCCGCCGACGGATGCTATCT
CCGCCTTGAAGTTCTCGCCCGACCCCGACTCCACGCGAATCGTTGTTTCT
TCCTGGGATAAGAACGTGTATCTGTACGACTTGCGCGATGAAAATGGTAC
CGTCGGAGAAGGCAAGCTGTTACAGAAGTTTGAGCATCGCGCTCCGGTGT
TGGATGTGTGTTTCGGCGCAACCGAGGATGAGATCTACACGGCTGGCTTG
GATTGGGACGTCAAGAAGTGAGTCCATGTCTGTTCTGTTTGGGCTTCGGT
AGCAACCAGCGCATAACCAACCTATTCCCTGCTGACAATAAACAGAATTG
ATGTAGCATCATCCACCCAGACCGTCCTCAGCAGCCACGAAGCTGGTGTT
CGAAGCGTCGTTTTCAGCGAGGAACACAACCTAGTAATATCCGCCTCTTG
GGACTCCACGTTGCATGTGCACCCGACGAACGATCCCGCCACAGCCCCCG
CTATCATTCCCCTCCCCTCGAAGCCCTTCTCCATGTCTCTTACCGCTACG
AAGCTCGTTGTCGCAATGGCTTCCCGCGCCCTACACATCTACGATCTGAA
AGCATTGGCTATGCTCACCGCTCAGTCGGAGGGTACGGTCCCCAACAAGA
TTGAAATCGAACCCTGGCAGCGAAGGGAGAGCAGCTTGAAGTTCATGACT
CGCTCAGTGGCATGCATGCCCGACGATGCAGGATACGCGTCATCCAGCAT
CGAGGGCCGTGTCGCGGTCGAATGGTTCGATCCGTCTGCTGAGTCGCAAG
CCCGCAAATATGCCTTCAAGTGTCACAGACAGACGGCGGATGATGTCGAC
GTCGTTTACCCTGTCAATGCGCTTGCGTTCCACCCGGTCCACGGTACGTT
TGCTTCGGGCGGTGGTGATGGAGTGGTTGCGCTTTGGGACGGTATTGCGA
AGAGGAGAATCAGACAGTATCAGAAGTATCCGTCGAGTGTGGCTGCTGTG
GACTTTAGCGGTAACGGAAAGTACCTGGCGATCGCGATTAGTCCGGGCTT
CGAGGATGGAAAAGATGATGTTGTCGAAGGGACGGTTAAGATCTTTGTAC
GTGAGCTTGGAGAGACGGAGGCGAAGGGGAAGGGCGCCAAATAA back to topCoding sequence (CDS) from alignment at An11:134941..136134- >CBS51388_006545-T1 ID=CBS51388_006545-T1|Name=CBS51388_006545-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3195bp|location=Sequence derived from alignment at An11:134941..136134- (Aspergillus niger CBS 513.88)
AATTGATGTAGCATCATCCACCCAGACCGTCCTCAGCAGCCACGAAGCTG
GTGTTCGAAGCGTCGTTTTCAGCGAGGAACACAACCTAGTAATATCCGCC
TCTTGGGACTCCACGTTGCATGTGCACCCGACGAACGATCCCGCCACAGC
CCCCGCTATCATTCCCCTCCCCTCGAAGCCCTTCTCCATGTCTCTTACCG
CTACGAAGCTCGTTGTCGCAATGGCTTCCCGCGCCCTACACATCTACGAT
CTGAAAGCATTGGCTATGCTCACCGCTCAGTCGGAGGGTACGGTCCCCAA
CAAGATTGAAATCGAACCCTGGCAGCGAAGGGAGAGCAGCTTGAAGTTCA
TGACTCGCTCAGTGGCATGCATGCCCGACGATGCAGGATACGCGTCATCC
AGCATCGAGGGCCGTGTCGCGGTCGAATGGTTCGATCCGTCTGCTGAGTC
GCAAGCCCGCAAATATGCCTTCAAGTGTCACAGACAGACGGCGGATGATG
TCGACGTCGTTTACCCTGTCAATGCGCTTGCGTTCCACCCGGTCCACGGT
ACGTTTGCTTCGGGCGGTGGTGATGGAGTGGTTGCGCTTTGGGACGGTAT
TGCGAAGAGGAGAATCAGACAGTATCAGAAGTATCCGTCGAGTGTGGCTG
CTGTGGACTTTAGCGGTAACGGAAAGTACCTGGCGATCGCGATTAGTCCG
GGCTTCGAGGATGGAAAAGATGATGTTGTCGAAGGGACGGTTAAGATCTT
TGTACGTGAGCTTGGAGAGACGGAGGCGAAGGGGAAGGGCGCCAAATAAA
TCAATTCTCTGTCGCATCCCCGCCGACGGATGCTATCTCCGCCTTGAAGT
TCTCGCCCGACCCCGACTCCACGCGAATCGTTGTTTCTTCCTGGGATAAG
AACGTGTATCTGTACGACTTGCGCGATGAAAATGGTACCGTCGGAGAAGG
CAAGCTGTTACAGAAGTTTGAGCATCGCGCTCCGGTGTTGGATGTGTGTT
TCGGCGCAACCGAGGATGAGATCTACACGGCTGGCTTGGATTGGGACGTC
AAGAAATGGCGTCAAAATTGATGTAGCATCATCCACCCAGACCGTCCTCA
GCAGCCACGAAGCTGGTGTTCGAAGCGTCGTTTTCAGCGAGGAACACAAC
CTAGTAATATCCGCCTCTTGGGACTCCACGTTGCATGTGCACCCGACGAA
CGATCCCGCCACAGCCCCCGCTATCATTCCCCTCCCCTCGAAGCCCTTCT
CCATGTCTCTTACCGCTACGAAGCTCGTTGTCGCAATGGCTTCCCGCGCC
CTACACATCTACGATCTGAAAGCATTGGCTATGCTCACCGCTCAGTCGGA
GGGTACGGTCCCCAACAAGATTGAAATCGAACCCTGGCAGCGAAGGGAGA
GCAGCTTGAAGTTCATGACTCGCTCAGTGGCATGCATGCCCGACGATGCA
GGATACGCGTCATCCAGCATCGAGGGCCGTGTCGCGGTCGAATGGTTCGA
TCCGTCTGCTGAGTCGCAAGCCCGCAAATATGCCTTCAAGTGTCACAGAC
AGACGGCGGATGATGTCGACGTCGTTTACCCTGTCAATGCGCTTGCGTTC
CACCCGGTCCACGGTACGTTTGCTTCGGGCGGTGGTGATGGAGTGGTTGC
GCTTTGGGACGGTATTGCGAAGAGGAGAATCAGACAGTATCAGAAGTATC
CGTCGAGTGTGGCTGCTGTGGACTTTAGCGGTAACGGAAAGTACCTGGCG
ATCGCGATTAGTCCGGGCTTCGAGGATGGAAAAGATGATGTTGTCGAAGG
GACGGTTAAGATCTTTGTACGTGAGCTTGGAGAGACGGAGGCGAAGGGGA
AGGGCGCCAAATAAATCAATTCTCTGTCGCATCCCCGCCGACGGATGCTA
TCTCCGCCTTGAAGTTCTCGCCCGACCCCGACTCCACGCGAATCGTTGTT
TCTTCCTGGGATAAGAACGTGTATCTGTACGACTTGCGCGATGAAAATGG
TACCGTCGGAGAAGGCAAGCTGTTACAGAAGTTTGAGCATCGCGCTCCGG
TGTTGGATGTGTGTTTCGGCGCAACCGAGGATGAGATCTACACGGCTGGC
TTGGATTGGGACGTCAAGAAATGGCGTCAAAATTGATGTAGCATCATCCA
CCCAGACCGTCCTCAGCAGCCACGAAGCTGGTGTTCGAAGCGTCGTTTTC
AGCGAGGAACACAACCTAGTAATATCCGCCTCTTGGGACTCCACGTTGCA
TGTGCACCCGACGAACGATCCCGCCACAGCCCCCGCTATCATTCCCCTCC
CCTCGAAGCCCTTCTCCATGTCTCTTACCGCTACGAAGCTCGTTGTCGCA
ATGGCTTCCCGCGCCCTACACATCTACGATCTGAAAGCATTGGCTATGCT
CACCGCTCAGTCGGAGGGTACGGTCCCCAACAAGATTGAAATCGAACCCT
GGCAGCGAAGGGAGAGCAGCTTGAAGTTCATGACTCGCTCAGTGGCATGC
ATGCCCGACGATGCAGGATACGCGTCATCCAGCATCGAGGGCCGTGTCGC
GGTCGAATGGTTCGATCCGTCTGCTGAGTCGCAAGCCCGCAAATATGCCT
TCAAGTGTCACAGACAGACGGCGGATGATGTCGACGTCGTTTACCCTGTC
AATGCGCTTGCGTTCCACCCGGTCCACGGTACGTTTGCTTCGGGCGGTGG
TGATGGAGTGGTTGCGCTTTGGGACGGTATTGCGAAGAGGAGAATCAGAC
AGTATCAGAAGTATCCGTCGAGTGTGGCTGCTGTGGACTTTAGCGGTAAC
GGAAAGTACCTGGCGATCGCGATTAGTCCGGGCTTCGAGGATGGAAAAGA
TGATGTTGTCGAAGGGACGGTTAAGATCTTTGTACGTGAGCTTGGAGAGA
CGGAGGCGAAGGGGAAGGGCGCCAAATAAATCAATTCTCTGTCGCATCCC
CGCCGACGGATGCTATCTCCGCCTTGAAGTTCTCGCCCGACCCCGACTCC
ACGCGAATCGTTGTTTCTTCCTGGGATAAGAACGTGTATCTGTACGACTT
GCGCGATGAAAATGGTACCGTCGGAGAAGGCAAGCTGTTACAGAAGTTTG
AGCATCGCGCTCCGGTGTTGGATGTGTGTTTCGGCGCAACCGAGGATGAG
ATCTACACGGCTGGCTTGGATTGGGACGTCAAGAAATGGCGTCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:134941..136134 - |
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