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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:136333..137521+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006546-T1 ID=CBS51388_006546-T1|Name=CBS51388_006546-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1189bp|location=Sequence derived from alignment at An11:136333..137521+ (Aspergillus niger CBS 513.88)
ATGCCGTTCGCGCAACTCGTCATAGGGCCCCCGGGCGCCGGGAAGTCAAC
CTACTGCAATGGCATGCACCAGTTTCTTGGAGCTATTGGTCGCAAATGCT
CCATTGTGAATCTGGACCCCGCAAATGATAAAACATCCTATCCGTGTGCG
CTGGACGTTCGCGACCTTGTCACGTTAGAGGAGATTATGAGTGAGGACCT
GTTGGGACCTAACGGGGGTATTTTGTATGCGCTGGAAGAATTAGAGGAGA
ACTTTGACTGGCTTGAGGAGGGGCTGAAGGATCTCGGAGGTATGCGCATT
CTGCCGTCTGAAGATGTTACAGGATCAAACGCTAATGCATATTCTATGTG
ATAGAGGACTACGTCCTGTTTGATTGCCCTGGCCAAGTTGAATTATTCAC
ACACCACTCGTCCCTACGAAACATATTCTTCAAATTGCAGAAGATGGGCT
ACAGAGTATGTCCTACCCGTCCCATCCGGAGTAACATGCTATGCGATACT
AACAAACGGACGATGCGCAGCTAATCGTGATCCATCTCATTGACTCCTAC
AACCTTACACTACCATCGATGTACATCTCCGCCCTCCTCCTCTCCCTCCG
CGCCATGCTCCAAATGGACCTACCTCACCTGAACGTCCTCACCAAGATCG
ACAATCTATCGAACTATTCCCCATTGCCCTTCAACCTCGATTACTACACA
GAAGTCCAAGACCTCAGCTACCTTCTCCCGCACCTCGAAGCCGAGTCATC
ACGGCTATCACATGAGAAGTTCGGACCGCTCAATAACGCGATCATCGACC
TAGTGGAGGAATTCGGACTAGTGAGCTTCGAGACGCTAGCCGTGGAGGAC
AAGAAGAGCATGATGAATTTACTGCACGTTATCGACCGCGCTAGCGGTTA
TGTGTTCGGACCCGCCGAGGGTGCAAACGACTCCATCTGGCAGGTTGCTG
TCCGAGAAGGCCTGGGACAGATGGACATCCGGGACGTGCAAGAGCGGTGG
CTGGACGCGAAAGACACGTACGATGAGCACGAGCTTAAGCAGCTAGAGGA
AGAAGCGAAAGCCGCCGAAAAGACAGCCGAAGACGCATCAGCACAGAAAC
CCAATATGGACTTCGATGACGACGAATACGACGATCTGGGGAGGGGGTCG
ATACCAGATGGTGGTGTGAAGGTTATACGAAAATCATGA back to topCoding sequence (CDS) from alignment at An11:136333..137521+ >CBS51388_006546-T1 ID=CBS51388_006546-T1|Name=CBS51388_006546-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3177bp|location=Sequence derived from alignment at An11:136333..137521+ (Aspergillus niger CBS 513.88)
ATGCCGTTCGCGCAACTCGTCATAGGGCCCCCGGGCGCCGGGAAGTCAAC
CTACTGCAATGGCATGCACCAGTTTCTTGGAGCTATTGGTCGCAAATGCT
CCATTGTGAATCTGGACCCCGCAAATGATAAAACATCCTATCCGTGTGCG
CTGGACGTTCGCGACCTTGTCACGTTAGAGGAGATTATGAGTGAGGACCT
GTTGGGACCTAACGGGGGTATTTTGTATGCGCTGGAAGAATTAGAGGAGA
ACTTTGACTGGCTTGAGGAGGGGCTGAAGGATCTCGGAGAGGACTACGTC
CTGTTTGATTGCCCTGGCCAAGTTGAATTATTCACACACCACTCGTCCCT
ACGAAACATATTCTTCAAATTGCAGAAGATGGGCTACAGACTAATCGTGA
TCCATCTCATTGACTCCTACAACCTTACACTACCATCGATGTACATCTCC
GCCCTCCTCCTCTCCCTCCGCGCCATGCTCCAAATGGACCTACCTCACCT
GAACGTCCTCACCAAGATCGACAATCTATCGAACTATTCCCCATTGCCCT
TCAACCTCGATTACTACACAGAAGTCCAAGACCTCAGCTACCTTCTCCCG
CACCTCGAAGCCGAGTCATCACGGCTATCACATGAGAAGTTCGGACCGCT
CAATAACGCGATCATCGACCTAGTGGAGGAATTCGGACTAGTGAGCTTCG
AGACGCTAGCCGTGGAGGACAAGAAGAGCATGATGAATTTACTGCACGTT
ATCGACCGCGCTAGCGGTTATGTGTTCGGACCCGCCGAGGGTGCAAACGA
CTCCATCTGGCAGGTTGCTGTCCGAGAAGGCCTGGGACAGATGGACATCC
GGGACGTGCAAGAGCGGTGGCTGGACGCGAAAGACACGTACGATGAGCAC
GAGCTTAAGCAGCTAGAGGAAGAAGCGAAAGCCGCCGAAAAGACAGCCGA
AGACGCATCAGCACAGAAACCCAATATGGACTTCGATGACGACGAATACG
ACGATCTGGGGAGGGGGTCGATACCAGATGGTGGTGTGAAGGTTATACGA
AAATCATGAATGCCGTTCGCGCAACTCGTCATAGGGCCCCCGGGCGCCGG
GAAGTCAACCTACTGCAATGGCATGCACCAGTTTCTTGGAGCTATTGGTC
GCAAATGCTCCATTGTGAATCTGGACCCCGCAAATGATAAAACATCCTAT
CCGTGTGCGCTGGACGTTCGCGACCTTGTCACGTTAGAGGAGATTATGAG
TGAGGACCTGTTGGGACCTAACGGGGGTATTTTGTATGCGCTGGAAGAAT
TAGAGGAGAACTTTGACTGGCTTGAGGAGGGGCTGAAGGATCTCGGAGAG
GACTACGTCCTGTTTGATTGCCCTGGCCAAGTTGAATTATTCACACACCA
CTCGTCCCTACGAAACATATTCTTCAAATTGCAGAAGATGGGCTACAGAC
TAATCGTGATCCATCTCATTGACTCCTACAACCTTACACTACCATCGATG
TACATCTCCGCCCTCCTCCTCTCCCTCCGCGCCATGCTCCAAATGGACCT
ACCTCACCTGAACGTCCTCACCAAGATCGACAATCTATCGAACTATTCCC
CATTGCCCTTCAACCTCGATTACTACACAGAAGTCCAAGACCTCAGCTAC
CTTCTCCCGCACCTCGAAGCCGAGTCATCACGGCTATCACATGAGAAGTT
CGGACCGCTCAATAACGCGATCATCGACCTAGTGGAGGAATTCGGACTAG
TGAGCTTCGAGACGCTAGCCGTGGAGGACAAGAAGAGCATGATGAATTTA
CTGCACGTTATCGACCGCGCTAGCGGTTATGTGTTCGGACCCGCCGAGGG
TGCAAACGACTCCATCTGGCAGGTTGCTGTCCGAGAAGGCCTGGGACAGA
TGGACATCCGGGACGTGCAAGAGCGGTGGCTGGACGCGAAAGACACGTAC
GATGAGCACGAGCTTAAGCAGCTAGAGGAAGAAGCGAAAGCCGCCGAAAA
GACAGCCGAAGACGCATCAGCACAGAAACCCAATATGGACTTCGATGACG
ACGAATACGACGATCTGGGGAGGGGGTCGATACCAGATGGTGGTGTGAAG
GTTATACGAAAATCATGAATGCCGTTCGCGCAACTCGTCATAGGGCCCCC
GGGCGCCGGGAAGTCAACCTACTGCAATGGCATGCACCAGTTTCTTGGAG
CTATTGGTCGCAAATGCTCCATTGTGAATCTGGACCCCGCAAATGATAAA
ACATCCTATCCGTGTGCGCTGGACGTTCGCGACCTTGTCACGTTAGAGGA
GATTATGAGTGAGGACCTGTTGGGACCTAACGGGGGTATTTTGTATGCGC
TGGAAGAATTAGAGGAGAACTTTGACTGGCTTGAGGAGGGGCTGAAGGAT
CTCGGAGAGGACTACGTCCTGTTTGATTGCCCTGGCCAAGTTGAATTATT
CACACACCACTCGTCCCTACGAAACATATTCTTCAAATTGCAGAAGATGG
GCTACAGACTAATCGTGATCCATCTCATTGACTCCTACAACCTTACACTA
CCATCGATGTACATCTCCGCCCTCCTCCTCTCCCTCCGCGCCATGCTCCA
AATGGACCTACCTCACCTGAACGTCCTCACCAAGATCGACAATCTATCGA
ACTATTCCCCATTGCCCTTCAACCTCGATTACTACACAGAAGTCCAAGAC
CTCAGCTACCTTCTCCCGCACCTCGAAGCCGAGTCATCACGGCTATCACA
TGAGAAGTTCGGACCGCTCAATAACGCGATCATCGACCTAGTGGAGGAAT
TCGGACTAGTGAGCTTCGAGACGCTAGCCGTGGAGGACAAGAAGAGCATG
ATGAATTTACTGCACGTTATCGACCGCGCTAGCGGTTATGTGTTCGGACC
CGCCGAGGGTGCAAACGACTCCATCTGGCAGGTTGCTGTCCGAGAAGGCC
TGGGACAGATGGACATCCGGGACGTGCAAGAGCGGTGGCTGGACGCGAAA
GACACGTACGATGAGCACGAGCTTAAGCAGCTAGAGGAAGAAGCGAAAGC
CGCCGAAAAGACAGCCGAAGACGCATCAGCACAGAAACCCAATATGGACT
TCGATGACGACGAATACGACGATCTGGGGAGGGGGTCGATACCAGATGGT
GGTGTGAAGGTTATACGAAAATCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR004130 |
| DBxref | PFAM:PF03029 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:136333..137521 + |
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