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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:137687..138412- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006547-T1 ID=CBS51388_006547-T1|Name=CBS51388_006547-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=726bp|location=Sequence derived from alignment at An11:137687..138412- (Aspergillus niger CBS 513.88)
ATGGTCCGCCTAAAACACCGCTACATCCTCCTCGACATCCTCTACCCCGA
CCCCTCAACATGGCCCCCAGCCGCCTCCCGCACCAACAAGAACCCTCTAT
CCAAATCAAAGTCGCAAGCACAGCTACAAATCCATTCGCCCACATCCGAT
GCCCTAACACCGGGCCTGCTAGCGAAAATGGTCAGAGAGGAAGTCTCACT
CATGTTTGGCGATTACGGCGTCGGTAGATTGGGTGGTGCGGGCGCGGGGG
GTATTAGTGGTATGTTTTCCTTCTCCTCTAGCTCTATTCCTCTTTGAATT
GGGTTTTTTTGCCTGCTGGGTTGTGATAATGAGACTAATTACTTGTTTGA
TGAATATCCAGTGAAATACCTCTCCCCTGCTACTTCGACGGCTATTATTC
GGTGTCCTCGCGCGTCGTTCCGGCTTGTGTGGACGGCGCTGACCTGCATG
TCGCAGGTTCCGGGGTTTAGTGAGGGTGGGTCGAAGAGGACGACGAGAGC
TTGTGTGTTTCGGGTTATTAGGGTGTCCGGGACGATGCGGAAGGCGGAGG
AGGAGGCGATTCGGAGGGCGAGGAGGGAGATTGTGCGGTTGAGGGAGGCG
GAGGAGAGTGGGGTTTTGGAGGGGTTGTTGGGGGGTTTAGTGGATGTGGC
TGGGGAGGAGAGTACGCCGGTTACTGGGGAGGATGTGGTTGGGGATGTGA
TGATGGAGAGTGAGGATGATGATTGA back to topCoding sequence (CDS) from alignment at An11:137687..138412- >CBS51388_006547-T1 ID=CBS51388_006547-T1|Name=CBS51388_006547-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1248bp|location=Sequence derived from alignment at An11:137687..138412- (Aspergillus niger CBS 513.88)
TGAAATACCTCTCCCCTGCTACTTCGACGGCTATTATTCGGTGTCCTCGC
GCGTCGTTCCGGCTTGTGTGGACGGCGCTGACCTGCATGTCGCAGGTTCC
GGGGTTTAGTGAGGGTGGGTCGAAGAGGACGACGAGAGCTTGTGTGTTTC
GGGTTATTAGGGTGTCCGGGACGATGCGGAAGGCGGAGGAGGAGGCGATT
CGGAGGGCGAGGAGGGAGATTGTGCGGTTGAGGGAGGCGGAGGAGAGTGG
GGTTTTGGAGGGGTTGTTGGGGGGTTTAGTGGATGTGGCTGGGGAGGAGA
GTACGCCGGTTACTGGGGAGGATGTGGTTGGGGATGTGATGATGGAGAGT
GAGGATGATGATTGAATGGTCCGCCTAAAACACCGCTACATCCTCCTCGA
CATCCTCTACCCCGACCCCTCAACATGGCCCCCAGCCGCCTCCCGCACCA
ACAAGAACCCTCTATCCAAATCAAAGTCGCAAGCACAGCTACAAATCCAT
TCGCCCACATCCGATGCCCTAACACCGGGCCTGCTAGCGAAAATGGTCAG
AGAGGAAGTCTCACTCATGTTTGGCGATTACGGCGTCGGTAGATTGGGTG
GTGCGGGCGCGGGGGGTATTAGTGTGAAATACCTCTCCCCTGCTACTTCG
ACGGCTATTATTCGGTGTCCTCGCGCGTCGTTCCGGCTTGTGTGGACGGC
GCTGACCTGCATGTCGCAGGTTCCGGGGTTTAGTGAGGGTGGGTCGAAGA
GGACGACGAGAGCTTGTGTGTTTCGGGTTATTAGGGTGTCCGGGACGATG
CGGAAGGCGGAGGAGGAGGCGATTCGGAGGGCGAGGAGGGAGATTGTGCG
GTTGAGGGAGGCGGAGGAGAGTGGGGTTTTGGAGGGGTTGTTGGGGGGTT
TAGTGGATGTGGCTGGGGAGGAGAGTACGCCGGTTACTGGGGAGGATGTG
GTTGGGGATGTGATGATGGAGAGTGAGGATGATGATTGAATGGTCCGCCT
AAAACACCGCTACATCCTCCTCGACATCCTCTACCCCGACCCCTCAACAT
GGCCCCCAGCCGCCTCCCGCACCAACAAGAACCCTCTATCCAAATCAAAG
TCGCAAGCACAGCTACAAATCCATTCGCCCACATCCGATGCCCTAACACC
GGGCCTGCTAGCGAAAATGGTCAGAGAGGAAGTCTCACTCATGTTTGGCG
ATTACGGCGTCGGTAGATTGGGTGGTGCGGGCGCGGGGGGTATTAGTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004540 | ribonuclease activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008033 | tRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR038085 |
| DBxref | InterPro:IPR002759 |
| DBxref | PFAM:PF01900 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:137687..138412 - |
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