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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:162303..163742+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006557-T1 ID=CBS51388_006557-T1|Name=CBS51388_006557-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1440bp|location=Sequence derived from alignment at An11:162303..163742+ (Aspergillus niger CBS 513.88)
ATGACTGAAGAACAAGGGCCTATCTGTGTTGCCTCTACCCGTCAGGAGGG
TGATGAGCATTGTCCAGGATTTGCAAGTCATTCTCTAAATTCTCAAGACT
CCACCTCCCTACAATCAAATGAGAAGCGCAGTCTCGGCCAAAACCCTAAT
ACAACATATTTCAAGGGCGCAGAATGGTAAGGCTCCAGGTGTCACTATCA
GAGCTTGGCTAATCTTGAAATTCAGGTCGGCGGATGGAACCACTTTATTG
ACGGATTCCTCCGATCACCATATCAGAACCTGGATCTTGTCAGTAAAACC
TACTCTCCTCTTGTCAACATAGCCTGACCAAAACTCTACAGACCACCTGA
TATGCTAGAAGACACGGCCTCTCCCTGCGGCTTATCGCCATACTCTGTCT
TGCCGTCAGCAGAACCGACCTATGCGACTGCCATGTACCCTTTCTTCTCC
CTTCAGGACCCGTCGACGACATTATTTCTCTCATCTGTTCGAGACCATCC
AATCAGATTGACATCTGCTCTTGCTCCGACTTCTGTGGCGACTTATTCTC
TGGTAAACCCAATGACAGAAGCCTTCATAACGCCTCATTCAATGATTTAT
CCATCTGCCCTGGGAGGGAGCCAATTTCTCACTGGCTCAGACAGCCTGAT
TTGCCTCTTTGATGTCTCTCGACCGGGTAACGATGGACCTGTCACTTCCA
TGCCGACAATACCAAGCAAAAGAAAGCAACAGGTGGGTGGAGGCGTGGGA
ATGAAAGGAATCATCTCTGCCATGGCCCTGGATCCGACAGGAGCTGGTAT
TTTAGCTGCTGGAACCTTCACCAGACATGTCGGACTTTATGGTGCACATG
GAACAGGGGAGTCCCTAGGGACATTCAGCATATCGAAAACAGAAGCCCAC
CGTCATATTGGCGGCCGTGGAATCACTCAACTGCTGTGGAGCCCCTGCGG
AAGGTACCTCTACGTTGCTGAACGGAAAAGTGATGGAGTCTTAGTATATG
ATATCCGAGTCACTGGACAACTGCTTGGATGGTTGCAGGGCCGCAAAGCT
TTCACAAATCAACGGTTGAAAATCGATGTATTCCCCAGTGGAGAAAACGG
CTCGCATGAGATCTGGGCTGGCGGAACCGATGGCTGCATGAGGGTGTGGC
AGAACCCTACACATGCTAGTGGTGCTCAGGATCCCAAGTGGGAATGGAAG
GTTCATAACGGTAAGTGTGCTTCCCGATGAAGGACAAGGACATCTGTGCT
AATATAGAATATAGACACTGTGAGCAGTACTGTATTGCATCCAATGGGGA
ATATAGTTGCCACAACTTCAGGTCAACGGCACTTCGAAAAAGACATCGAC
GACGCCAGCTTACCACCTATGCCTGATATTGACAACAGCTTGAAGGTGTG
GTATATGCCACTTCTAAATGCGAACAGCGATGACGACTGA back to topCoding sequence (CDS) from alignment at An11:162303..163742+ >CBS51388_006557-T1 ID=CBS51388_006557-T1|Name=CBS51388_006557-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5136bp|location=Sequence derived from alignment at An11:162303..163742+ (Aspergillus niger CBS 513.88)
ATGACTGAAGAACAAGGGCCTATCTGTGTTGCCTCTACCCGTCAGGAGGG
TGATGAGCATTGTCCAGGATTTGCAAGTCATTCTCTAAATTCTCAAGACT
CCACCTCCCTACAATCAAATGAGAAGCGCAGTCTCGGCCAAAACCCTAAT
ACAACATATTTCAAGGGCGCAGAATGGTCGGCGGATGGAACCACTTTATT
GACGGATTCCTCCGATCACCATATCAGAACCTGGATCTTACCACCTGATA
TGCTAGAAGACACGGCCTCTCCCTGCGGCTTATCGCCATACTCTGTCTTG
CCGTCAGCAGAACCGACCTATGCGACTGCCATGTACCCTTTCTTCTCCCT
TCAGGACCCGTCGACGACATTATTTCTCTCATCTGTTCGAGACCATCCAA
TCAGATTGACATCTGCTCTTGCTCCGACTTCTGTGGCGACTTATTCTCTG
GTAAACCCAATGACAGAAGCCTTCATAACGCCTCATTCAATGATTTATCC
ATCTGCCCTGGGAGGGAGCCAATTTCTCACTGGCTCAGACAGCCTGATTT
GCCTCTTTGATGTCTCTCGACCGGGTAACGATGGACCTGTCACTTCCATG
CCGACAATACCAAGCAAAAGAAAGCAACAGGTGGGTGGAGGCGTGGGAAT
GAAAGGAATCATCTCTGCCATGGCCCTGGATCCGACAGGAGCTGGTATTT
TAGCTGCTGGAACCTTCACCAGACATGTCGGACTTTATGGTGCACATGGA
ACAGGGGAGTCCCTAGGGACATTCAGCATATCGAAAACAGAAGCCCACCG
TCATATTGGCGGCCGTGGAATCACTCAACTGCTGTGGAGCCCCTGCGGAA
GGTACCTCTACGTTGCTGAACGGAAAAGTGATGGAGTCTTAGTATATGAT
ATCCGAGTCACTGGACAACTGCTTGGATGGTTGCAGGGCCGCAAAGCTTT
CACAAATCAACGGTTGAAAATCGATGTATTCCCCAGTGGAGAAAACGGCT
CGCATGAGATCTGGGCTGGCGGAACCGATGGCTGCATGAGGGTGTGGCAG
AACCCTACACATGCTAGTGGTGCTCAGGATCCCAAGTGGGAATGGAAGGT
TCATAACGACACTGTGAGCAGTACTGTATTGCATCCAATGGGGAATATAG
TTGCCACAACTTCAGGTCAACGGCACTTCGAAAAAGACATCGACGACGCC
AGCTTACCACCTATGCCTGATATTGACAACAGCTTGAAGGTGTGGTATAT
GCCACTTCTAAATGCGAACAGCGATGACGACTGAATGACTGAAGAACAAG
GGCCTATCTGTGTTGCCTCTACCCGTCAGGAGGGTGATGAGCATTGTCCA
GGATTTGCAAGTCATTCTCTAAATTCTCAAGACTCCACCTCCCTACAATC
AAATGAGAAGCGCAGTCTCGGCCAAAACCCTAATACAACATATTTCAAGG
GCGCAGAATGGTCGGCGGATGGAACCACTTTATTGACGGATTCCTCCGAT
CACCATATCAGAACCTGGATCTTACCACCTGATATGCTAGAAGACACGGC
CTCTCCCTGCGGCTTATCGCCATACTCTGTCTTGCCGTCAGCAGAACCGA
CCTATGCGACTGCCATGTACCCTTTCTTCTCCCTTCAGGACCCGTCGACG
ACATTATTTCTCTCATCTGTTCGAGACCATCCAATCAGATTGACATCTGC
TCTTGCTCCGACTTCTGTGGCGACTTATTCTCTGGTAAACCCAATGACAG
AAGCCTTCATAACGCCTCATTCAATGATTTATCCATCTGCCCTGGGAGGG
AGCCAATTTCTCACTGGCTCAGACAGCCTGATTTGCCTCTTTGATGTCTC
TCGACCGGGTAACGATGGACCTGTCACTTCCATGCCGACAATACCAAGCA
AAAGAAAGCAACAGGTGGGTGGAGGCGTGGGAATGAAAGGAATCATCTCT
GCCATGGCCCTGGATCCGACAGGAGCTGGTATTTTAGCTGCTGGAACCTT
CACCAGACATGTCGGACTTTATGGTGCACATGGAACAGGGGAGTCCCTAG
GGACATTCAGCATATCGAAAACAGAAGCCCACCGTCATATTGGCGGCCGT
GGAATCACTCAACTGCTGTGGAGCCCCTGCGGAAGGTACCTCTACGTTGC
TGAACGGAAAAGTGATGGAGTCTTAGTATATGATATCCGAGTCACTGGAC
AACTGCTTGGATGGTTGCAGGGCCGCAAAGCTTTCACAAATCAACGGTTG
AAAATCGATGTATTCCCCAGTGGAGAAAACGGCTCGCATGAGATCTGGGC
TGGCGGAACCGATGGCTGCATGAGGGTGTGGCAGAACCCTACACATGCTA
GTGGTGCTCAGGATCCCAAGTGGGAATGGAAGGTTCATAACGACACTGTG
AGCAGTACTGTATTGCATCCAATGGGGAATATAGTTGCCACAACTTCAGG
TCAACGGCACTTCGAAAAAGACATCGACGACGCCAGCTTACCACCTATGC
CTGATATTGACAACAGCTTGAAGGTGTGGTATATGCCACTTCTAAATGCG
AACAGCGATGACGACTGAATGACTGAAGAACAAGGGCCTATCTGTGTTGC
CTCTACCCGTCAGGAGGGTGATGAGCATTGTCCAGGATTTGCAAGTCATT
CTCTAAATTCTCAAGACTCCACCTCCCTACAATCAAATGAGAAGCGCAGT
CTCGGCCAAAACCCTAATACAACATATTTCAAGGGCGCAGAATGGTCGGC
GGATGGAACCACTTTATTGACGGATTCCTCCGATCACCATATCAGAACCT
GGATCTTACCACCTGATATGCTAGAAGACACGGCCTCTCCCTGCGGCTTA
TCGCCATACTCTGTCTTGCCGTCAGCAGAACCGACCTATGCGACTGCCAT
GTACCCTTTCTTCTCCCTTCAGGACCCGTCGACGACATTATTTCTCTCAT
CTGTTCGAGACCATCCAATCAGATTGACATCTGCTCTTGCTCCGACTTCT
GTGGCGACTTATTCTCTGGTAAACCCAATGACAGAAGCCTTCATAACGCC
TCATTCAATGATTTATCCATCTGCCCTGGGAGGGAGCCAATTTCTCACTG
GCTCAGACAGCCTGATTTGCCTCTTTGATGTCTCTCGACCGGGTAACGAT
GGACCTGTCACTTCCATGCCGACAATACCAAGCAAAAGAAAGCAACAGGT
GGGTGGAGGCGTGGGAATGAAAGGAATCATCTCTGCCATGGCCCTGGATC
CGACAGGAGCTGGTATTTTAGCTGCTGGAACCTTCACCAGACATGTCGGA
CTTTATGGTGCACATGGAACAGGGGAGTCCCTAGGGACATTCAGCATATC
GAAAACAGAAGCCCACCGTCATATTGGCGGCCGTGGAATCACTCAACTGC
TGTGGAGCCCCTGCGGAAGGTACCTCTACGTTGCTGAACGGAAAAGTGAT
GGAGTCTTAGTATATGATATCCGAGTCACTGGACAACTGCTTGGATGGTT
GCAGGGCCGCAAAGCTTTCACAAATCAACGGTTGAAAATCGATGTATTCC
CCAGTGGAGAAAACGGCTCGCATGAGATCTGGGCTGGCGGAACCGATGGC
TGCATGAGGGTGTGGCAGAACCCTACACATGCTAGTGGTGCTCAGGATCC
CAAGTGGGAATGGAAGGTTCATAACGACACTGTGAGCAGTACTGTATTGC
ATCCAATGGGGAATATAGTTGCCACAACTTCAGGTCAACGGCACTTCGAA
AAAGACATCGACGACGCCAGCTTACCACCTATGCCTGATATTGACAACAG
CTTGAAGGTGTGGTATATGCCACTTCTAAATGCGAACAGCGATGACGACT
GAATGACTGAAGAACAAGGGCCTATCTGTGTTGCCTCTACCCGTCAGGAG
GGTGATGAGCATTGTCCAGGATTTGCAAGTCATTCTCTAAATTCTCAAGA
CTCCACCTCCCTACAATCAAATGAGAAGCGCAGTCTCGGCCAAAACCCTA
ATACAACATATTTCAAGGGCGCAGAATGGTCGGCGGATGGAACCACTTTA
TTGACGGATTCCTCCGATCACCATATCAGAACCTGGATCTTACCACCTGA
TATGCTAGAAGACACGGCCTCTCCCTGCGGCTTATCGCCATACTCTGTCT
TGCCGTCAGCAGAACCGACCTATGCGACTGCCATGTACCCTTTCTTCTCC
CTTCAGGACCCGTCGACGACATTATTTCTCTCATCTGTTCGAGACCATCC
AATCAGATTGACATCTGCTCTTGCTCCGACTTCTGTGGCGACTTATTCTC
TGGTAAACCCAATGACAGAAGCCTTCATAACGCCTCATTCAATGATTTAT
CCATCTGCCCTGGGAGGGAGCCAATTTCTCACTGGCTCAGACAGCCTGAT
TTGCCTCTTTGATGTCTCTCGACCGGGTAACGATGGACCTGTCACTTCCA
TGCCGACAATACCAAGCAAAAGAAAGCAACAGGTGGGTGGAGGCGTGGGA
ATGAAAGGAATCATCTCTGCCATGGCCCTGGATCCGACAGGAGCTGGTAT
TTTAGCTGCTGGAACCTTCACCAGACATGTCGGACTTTATGGTGCACATG
GAACAGGGGAGTCCCTAGGGACATTCAGCATATCGAAAACAGAAGCCCAC
CGTCATATTGGCGGCCGTGGAATCACTCAACTGCTGTGGAGCCCCTGCGG
AAGGTACCTCTACGTTGCTGAACGGAAAAGTGATGGAGTCTTAGTATATG
ATATCCGAGTCACTGGACAACTGCTTGGATGGTTGCAGGGCCGCAAAGCT
TTCACAAATCAACGGTTGAAAATCGATGTATTCCCCAGTGGAGAAAACGG
CTCGCATGAGATCTGGGCTGGCGGAACCGATGGCTGCATGAGGGTGTGGC
AGAACCCTACACATGCTAGTGGTGCTCAGGATCCCAAGTGGGAATGGAAG
GTTCATAACGACACTGTGAGCAGTACTGTATTGCATCCAATGGGGAATAT
AGTTGCCACAACTTCAGGTCAACGGCACTTCGAAAAAGACATCGACGACG
CCAGCTTACCACCTATGCCTGATATTGACAACAGCTTGAAGGTGTGGTAT
ATGCCACTTCTAAATGCGAACAGCGATGACGACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR015943 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:162303..163742 + |
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