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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:266290..267754+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006593-T1 ID=CBS51388_006593-T1|Name=CBS51388_006593-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1465bp|location=Sequence derived from alignment at An11:266290..267754+ (Aspergillus niger CBS 513.88)
ATGGCTCGTGTACGGAGAAGGTCGAGTAACCTGGGGGCGGACATTCGGGG
AGACACCACCGCTCCCGCCATGTCCACCATGAACGAAGTCAGCCCCATTG
AACCCGAGGCTCCTAAATGGGACAAGGTATGGATCTCTCACGACTAGACG
TCGACTCTCGCTGGGGTTCCTCATCCCCCCCGCTCACTCCTCCGCCAGGC
CTTGCAGAATCAATCCGCCGATAAACTCTCCAAGCCGCATACGAAGCGCC
GCAAGAAGTCCCCGCTCCGTCGCTTCAAGGATGTGTGTCTCAAGCATACT
TGGCTTTTGCCTCTCCTCATGCTCATCGTTCTTCTGTCGCTGTACGCGAT
CAACCCGACGGAATCCAATCCCATGCATAGCGCCATCTTTTTGTCTTATC
CTCTGCCTCCAAAGGTCCCCGGTGGTCCGATCATGTATGGAAAGGGCCCC
AAGGATATTACCTTTGTCTCATTCTACACGATTGTTCTGTCGTTTACTCG
AGAATTCCTGATGCAGCGCCTTATTCGGCCTTTCGCTGTATACTGCGGGA
TCCGAGGCCGGGGCAAGACTGCCCGTTTCATGGAGCAGGTGTACACCGCG
ATCTACTTTGCCATCTTCGGTCCATTCGGCCTGTACGTCATGAGCCGGTC
GGATATCTGGTACTTCAACACTACGGCCATGTTCGAAGGGTTCCCCCACC
GGGAGCACGAAGGGTTGTTCAAGGCATTCTATCTGCTTGAGGCTAGTTAC
TGGGCTCAGCAGGCGATTGTCCTGATGTTGCAGTTGGAGAAGCCGCGCAA
GGATTTCAAGGAGCTGGTTGGACACCACATCATCACTCTGGCTCTGATCG
GATTGAGTTATCGCTTCCACTTCACCTACATGGGTATCGCCGTCTACATC
ACGCACGACATCTCTGACTTCTTCCTTGCTGTGAGTGATCCGATTCGAAG
TCCACACTTTTTCTGTTCTTCATGCTGATCGAGTTGCCGTGCAGACCTCC
AAGACCTTGAACTACCTCGACCACATCATCACTGTCCCTTACTTTGGTAT
GTTTGTGGGCATGTGGATCTACCTTCGCCACTATCTGAATCTTAAGATCC
TCTGGGCTGTGTTGACCGAGTTCCGCACGGTCGGACCTTTTGAGCTGAAC
TGGGAGACTCAACAGTACAAGTGCTGGATCAGTCAGTACATCACTTTTGC
CCTGTTGGCCAGTCTGCAAGCCGTGAACCTCTTCTGGCTCTTCCTGATCC
TGCGCATCCTGAAGAACTACATTTTCAACAGCATCAAGAAGGACGAGAGA
AGCGAAGATGAAGACTCGGAGGAAGAGGAAGTCCCTGTGCCGGACACGGA
CACCCACGCGACCCTTGCGACCGGCGTCGAGGGAGCCACCGTGACTGCAC
GTGGCAAGGAGAACCAGACTCCGCAGGTGCTGGTCAACGGCAAGCCCGTC
AACTCCAAGAACTGA back to topCoding sequence (CDS) from alignment at An11:266290..267754+ >CBS51388_006593-T1 ID=CBS51388_006593-T1|Name=CBS51388_006593-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3987bp|location=Sequence derived from alignment at An11:266290..267754+ (Aspergillus niger CBS 513.88)
ATGGCTCGTGTACGGAGAAGGTCGAGTAACCTGGGGGCGGACATTCGGGG
AGACACCACCGCTCCCGCCATGTCCACCATGAACGAAGTCAGCCCCATTG
AACCCGAGGCTCCTAAATGGGACAAGGCCTTGCAGAATCAATCCGCCGAT
AAACTCTCCAAGCCGCATACGAAGCGCCGCAAGAAGTCCCCGCTCCGTCG
CTTCAAGGATGTGTGTCTCAAGCATACTTGGCTTTTGCCTCTCCTCATGC
TCATCGTTCTTCTGTCGCTGTACGCGATCAACCCGACGGAATCCAATCCC
ATGCATAGCGCCATCTTTTTGTCTTATCCTCTGCCTCCAAAGGTCCCCGG
TGGTCCGATCATGTATGGAAAGGGCCCCAAGGATATTACCTTTGTCTCAT
TCTACACGATTGTTCTGTCGTTTACTCGAGAATTCCTGATGCAGCGCCTT
ATTCGGCCTTTCGCTGTATACTGCGGGATCCGAGGCCGGGGCAAGACTGC
CCGTTTCATGGAGCAGGTGTACACCGCGATCTACTTTGCCATCTTCGGTC
CATTCGGCCTGTACGTCATGAGCCGGTCGGATATCTGGTACTTCAACACT
ACGGCCATGTTCGAAGGGTTCCCCCACCGGGAGCACGAAGGGTTGTTCAA
GGCATTCTATCTGCTTGAGGCTAGTTACTGGGCTCAGCAGGCGATTGTCC
TGATGTTGCAGTTGGAGAAGCCGCGCAAGGATTTCAAGGAGCTGGTTGGA
CACCACATCATCACTCTGGCTCTGATCGGATTGAGTTATCGCTTCCACTT
CACCTACATGGGTATCGCCGTCTACATCACGCACGACATCTCTGACTTCT
TCCTTGCTACCTCCAAGACCTTGAACTACCTCGACCACATCATCACTGTC
CCTTACTTTGGTATGTTTGTGGGCATGTGGATCTACCTTCGCCACTATCT
GAATCTTAAGATCCTCTGGGCTGTGTTGACCGAGTTCCGCACGGTCGGAC
CTTTTGAGCTGAACTGGGAGACTCAACAGTACAAGTGCTGGATCAGTCAG
TACATCACTTTTGCCCTGTTGGCCAGTCTGCAAGCCGTGAACCTCTTCTG
GCTCTTCCTGATCCTGCGCATCCTGAAGAACTACATTTTCAACAGCATCA
AGAAGGACGAGAGAAGCGAAGATGAAGACTCGGAGGAAGAGGAAGTCCCT
GTGCCGGACACGGACACCCACGCGACCCTTGCGACCGGCGTCGAGGGAGC
CACCGTGACTGCACGTGGCAAGGAGAACCAGACTCCGCAGGTGCTGGTCA
ACGGCAAGCCCGTCAACTCCAAGAACTGAATGGCTCGTGTACGGAGAAGG
TCGAGTAACCTGGGGGCGGACATTCGGGGAGACACCACCGCTCCCGCCAT
GTCCACCATGAACGAAGTCAGCCCCATTGAACCCGAGGCTCCTAAATGGG
ACAAGGCCTTGCAGAATCAATCCGCCGATAAACTCTCCAAGCCGCATACG
AAGCGCCGCAAGAAGTCCCCGCTCCGTCGCTTCAAGGATGTGTGTCTCAA
GCATACTTGGCTTTTGCCTCTCCTCATGCTCATCGTTCTTCTGTCGCTGT
ACGCGATCAACCCGACGGAATCCAATCCCATGCATAGCGCCATCTTTTTG
TCTTATCCTCTGCCTCCAAAGGTCCCCGGTGGTCCGATCATGTATGGAAA
GGGCCCCAAGGATATTACCTTTGTCTCATTCTACACGATTGTTCTGTCGT
TTACTCGAGAATTCCTGATGCAGCGCCTTATTCGGCCTTTCGCTGTATAC
TGCGGGATCCGAGGCCGGGGCAAGACTGCCCGTTTCATGGAGCAGGTGTA
CACCGCGATCTACTTTGCCATCTTCGGTCCATTCGGCCTGTACGTCATGA
GCCGGTCGGATATCTGGTACTTCAACACTACGGCCATGTTCGAAGGGTTC
CCCCACCGGGAGCACGAAGGGTTGTTCAAGGCATTCTATCTGCTTGAGGC
TAGTTACTGGGCTCAGCAGGCGATTGTCCTGATGTTGCAGTTGGAGAAGC
CGCGCAAGGATTTCAAGGAGCTGGTTGGACACCACATCATCACTCTGGCT
CTGATCGGATTGAGTTATCGCTTCCACTTCACCTACATGGGTATCGCCGT
CTACATCACGCACGACATCTCTGACTTCTTCCTTGCTACCTCCAAGACCT
TGAACTACCTCGACCACATCATCACTGTCCCTTACTTTGGTATGTTTGTG
GGCATGTGGATCTACCTTCGCCACTATCTGAATCTTAAGATCCTCTGGGC
TGTGTTGACCGAGTTCCGCACGGTCGGACCTTTTGAGCTGAACTGGGAGA
CTCAACAGTACAAGTGCTGGATCAGTCAGTACATCACTTTTGCCCTGTTG
GCCAGTCTGCAAGCCGTGAACCTCTTCTGGCTCTTCCTGATCCTGCGCAT
CCTGAAGAACTACATTTTCAACAGCATCAAGAAGGACGAGAGAAGCGAAG
ATGAAGACTCGGAGGAAGAGGAAGTCCCTGTGCCGGACACGGACACCCAC
GCGACCCTTGCGACCGGCGTCGAGGGAGCCACCGTGACTGCACGTGGCAA
GGAGAACCAGACTCCGCAGGTGCTGGTCAACGGCAAGCCCGTCAACTCCA
AGAACTGAATGGCTCGTGTACGGAGAAGGTCGAGTAACCTGGGGGCGGAC
ATTCGGGGAGACACCACCGCTCCCGCCATGTCCACCATGAACGAAGTCAG
CCCCATTGAACCCGAGGCTCCTAAATGGGACAAGGCCTTGCAGAATCAAT
CCGCCGATAAACTCTCCAAGCCGCATACGAAGCGCCGCAAGAAGTCCCCG
CTCCGTCGCTTCAAGGATGTGTGTCTCAAGCATACTTGGCTTTTGCCTCT
CCTCATGCTCATCGTTCTTCTGTCGCTGTACGCGATCAACCCGACGGAAT
CCAATCCCATGCATAGCGCCATCTTTTTGTCTTATCCTCTGCCTCCAAAG
GTCCCCGGTGGTCCGATCATGTATGGAAAGGGCCCCAAGGATATTACCTT
TGTCTCATTCTACACGATTGTTCTGTCGTTTACTCGAGAATTCCTGATGC
AGCGCCTTATTCGGCCTTTCGCTGTATACTGCGGGATCCGAGGCCGGGGC
AAGACTGCCCGTTTCATGGAGCAGGTGTACACCGCGATCTACTTTGCCAT
CTTCGGTCCATTCGGCCTGTACGTCATGAGCCGGTCGGATATCTGGTACT
TCAACACTACGGCCATGTTCGAAGGGTTCCCCCACCGGGAGCACGAAGGG
TTGTTCAAGGCATTCTATCTGCTTGAGGCTAGTTACTGGGCTCAGCAGGC
GATTGTCCTGATGTTGCAGTTGGAGAAGCCGCGCAAGGATTTCAAGGAGC
TGGTTGGACACCACATCATCACTCTGGCTCTGATCGGATTGAGTTATCGC
TTCCACTTCACCTACATGGGTATCGCCGTCTACATCACGCACGACATCTC
TGACTTCTTCCTTGCTACCTCCAAGACCTTGAACTACCTCGACCACATCA
TCACTGTCCCTTACTTTGGTATGTTTGTGGGCATGTGGATCTACCTTCGC
CACTATCTGAATCTTAAGATCCTCTGGGCTGTGTTGACCGAGTTCCGCAC
GGTCGGACCTTTTGAGCTGAACTGGGAGACTCAACAGTACAAGTGCTGGA
TCAGTCAGTACATCACTTTTGCCCTGTTGGCCAGTCTGCAAGCCGTGAAC
CTCTTCTGGCTCTTCCTGATCCTGCGCATCCTGAAGAACTACATTTTCAA
CAGCATCAAGAAGGACGAGAGAAGCGAAGATGAAGACTCGGAGGAAGAGG
AAGTCCCTGTGCCGGACACGGACACCCACGCGACCCTTGCGACCGGCGTC
GAGGGAGCCACCGTGACTGCACGTGGCAAGGAGAACCAGACTCCGCAGGT
GCTGGTCAACGGCAAGCCCGTCAACTCCAAGAACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013599 |
| DBxref | InterPro:IPR006634 |
| DBxref | PFAM:PF03798 |
| DBxref | PFAM:PF08390 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:266290..267754 + |
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