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CBS51388_006596-T1, CBS51388_006596-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006596-T1
Unique NameCBS51388_006596-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:279380..281132+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006596-T1 ID=CBS51388_006596-T1|Name=CBS51388_006596-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1753bp|location=Sequence derived from alignment at An11:279380..281132+ (Aspergillus niger CBS 513.88)
ATGACTCGCGGGAGTTCAACACATTCAACCCCCACGACGACTGCAACCGC
GCTGTCCAGCAGCCCTGCTCCTAGTTCCACCGCGGTAGGTACCGAGCTGC
CTAACGTAGGCGAATTGTTTCGCGACCAGTTGGAGCATCGACGACCCTCC
ATCGCGCGTCCGGTAGCATCCGCTCCGCGCGTGATCCGGCTCGCCTCGCT
GCCAGAGGCGAAATCAGTGGCATTGCGATACTTTGATAGTTTGGGGTACC
AATATCCTTTTCTCCATCGCGAGGAGTTCATGGCCCATCTCGATCGCATC
TATGCGGGGGAGGTCCCCGCACCAGAGGTTCATCACTCGTATCACATCAC
CATCGCAACGGCCTTGTTGATCGGATCTGCCGACGAGTCACAGGCTGCCG
AGTTCTATCATGTTAGCAATGAGACAATGACCTTGGCTTTGCAGAATGAA
GATCTGGCTGCTGTTCGAGCCCTTCTGAGCGTCGCTGTGTATACAATGTT
TGCGACCACGGGCCCCAGCGTATGGCACATCCTCGGGACTACTTTGCGTC
TCGCCACCAGTCTCGGGCTGCATAAAGCCCGTCCAACGGGGAACGTGATA
GAAGAGGAGATGGCCAAGCGGGCGTTCTGGAGTCTCTACAACCTCGATCG
ACTGATCGCAAGCACCCTTGGAAGGCCACTTGGAATTGCAGACGAGGATA
TCTCAATAGGCTTGCCGCGGGAATTCAACGACAACTGGACAGAGACACCC
GGAGCTAGTGCTATGACCATTCCATTGCAGGTGGTGCGCCTGCGCCGGAT
ATTCTCGCGCATCTACCGCTACTGTAAGTCTCTTCGAGTTTGCCCCCGGT
GCTCACTGAGGTCTAGTCCCACTGACTGTGACAGTATTCAACAACCAACC
GCCACCTCCTCCAACAGAGGTTGCCATCACGCTCAGTCATTTCCGCCAGG
AACTAGACGACTGGCGACAGGAAGCACCGGTGTATGCGCCCGCGCTTCTG
TACTCGACTAGCTACTACGACTATCTATACGCAACGACACTGCTCCTTAT
GTACCGGCCTAGTCCGCGTAATCCGACACCTGATGCAACGAGCATCGTGA
GCTGTGGCAATGCCAGCATTCAGGTCATTCGGTCCTACTGGGACAGCTAT
TCGCAGGGCAAGCTCAAGTGGATCTGGTTGACCCTCAGCCAGGTTTACTT
TGCCGGCATCACAATCCTGTGGTGTCTTAACCATAATCTTCAGTCTGTCC
GTGAAGGCCGTGGTGCTGCGTGGAAGCCTGAGGATCAGAGCATGCGACGG
GCCATCCAGGCAGTAGTTGTTCTGCTGGAGGAATTTGGCAAGAGACGTCC
GGGAGTGGACCGACTGGCGGAGACGTTTCGGAACCAGAGCACGATGATCT
TCAGCCATCTGGCATACCAGCAGGAGCAGGAGCAGCAGCAGCAGCAGCTT
CAACAACAACAACAGCCACAACCACTCCCGCCTCCACCGCAGCCACAGCC
ACAGCCACCAATACCACACCATCAAACGCTCTTGGAACAGCAGCCGCAGC
AACAACCACAACAGCAGCAGCAGCAGCAACAGCAACAACACATTTTGGTA
GCACCGCCGGTGCCCCTAGCGCCGGTGCTGGATGACGTTCTCCTGGTCAA
TGGATCGGGGAACGTGCCCATGATTGATCCACAACTGGCGGAGCAATTAT
TCTATTCCTATGACTGGTTTCAGGAGGAGATGGCGACATACTATACCCTT
TAA
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Coding sequence (CDS) from alignment at An11:279380..281132+

>CBS51388_006596-T1 ID=CBS51388_006596-T1|Name=CBS51388_006596-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3384bp|location=Sequence derived from alignment at An11:279380..281132+ (Aspergillus niger CBS 513.88)
ATGACTCGCGGGAGTTCAACACATTCAACCCCCACGACGACTGCAACCGC
GCTGTCCAGCAGCCCTGCTCCTAGTTCCACCGCGGTAGGTACCGAGCTGC
CTAACGTAGGCGAATTGTTTCGCGACCAGTTGGAGCATCGACGACCCTCC
ATCGCGCGTCCGGTAGCATCCGCTCCGCGCGTGATCCGGCTCGCCTCGCT
GCCAGAGGCGAAATCAGTGGCATTGCGATACTTTGATAGTTTGGGGTACC
AATATCCTTTTCTCCATCGCGAGGAGTTCATGGCCCATCTCGATCGCATC
TATGCGGGGGAGGTCCCCGCACCAGAGGTTCATCACTCGTATCACATCAC
CATCGCAACGGCCTTGTTGATCGGATCTGCCGACGAGTCACAGGCTGCCG
AGTTCTATCATGTTAGCAATGAGACAATGACCTTGGCTTTGCAGAATGAA
GATCTGGCTGCTGTTCGAGCCCTTCTGAGCGTCGCTGTGTATACAATGTT
TGCGACCACGGGCCCCAGCGTATGGCACATCCTCGGGACTACTTTGCGTC
TCGCCACCAGTCTCGGGCTGCATAAAGCCCGTCCAACGGGGAACGTGATA
GAAGAGGAGATGGCCAAGCGGGCGTTCTGGAGTCTCTACAACCTCGATCG
ACTGATCGCAAGCACCCTTGGAAGGCCACTTGGAATTGCAGACGAGGATA
TCTCAATAGGCTTGCCGCGGGAATTCAACGACAACTGGACAGAGACACCC
GGAGCTAGTGCTATGACCATTCCATTGCAGGTGGTGCGCCTGCGCCGGAT
ATTCTCGCGCATCTACCGCTACTTATTCAACAACCAACCGCCACCTCCTC
CAACAGAGGTTGCCATCACGCTCAGTCATTTCCGCCAGGAACTAGACGAC
TGGCGACAGGAAGCACCGGTGTATGCGCCCGCGCTTCTGTACTCGACTAG
CTACTACGACTATCTATACGCAACGACACTGCTCCTTATGTACCGGCCTA
GTCCGCGTAATCCGACACCTGATGCAACGAGCATCGTGAGCTGTGGCAAT
GCCAGCATTCAGGTCATTCGGTCCTACTGGGACAGCTATTCGCAGGGCAA
GCTCAAGTGGATCTGGTTGACCCTCAGCCAGGTTTACTTTGCCGGCATCA
CAATCCTGTGGTGTCTTAACCATAATCTTCAGTCTGTCCGTGAAGGCCGT
GGTGCTGCGTGGAAGCCTGAGGATCAGAGCATGCGACGGGCCATCCAGGC
AGTAGTTGTTCTGCTGGAGGAATTTGGCAAGAGACGTCCGGGAGTGGACC
GACTGGCGGAGACGTTTCGGAACCAGAGCACGATGATCTTCAGCCATCTG
GCATACCAGCAGGAGCAGGAGCAGCAGCAGCAGCAGCTTCAACAACAACA
ACAGCCACAACCACTCCCGCCTCCACCGCAGCCACAGCCACAGCCACCAA
TACCACACCATCAAACGCTCTTGGAACAGCAGCCGCAGCAACAACCACAA
CAGCAGCAGCAGCAGCAACAGCAACAACACATTTTGGTAGCACCGCCGGT
GCCCCTAGCGCCGGTGCTGGATGACGTTCTCCTGGTCAATGGATCGGGGA
ACGTGCCCATGATTGATCCACAACTGGCGGAGCAATTATTCTATTCCTAT
GACTGGTTTCAGGAGGAGATGGCGACATACTATACCCTTTAAATGACTCG
CGGGAGTTCAACACATTCAACCCCCACGACGACTGCAACCGCGCTGTCCA
GCAGCCCTGCTCCTAGTTCCACCGCGGTAGGTACCGAGCTGCCTAACGTA
GGCGAATTGTTTCGCGACCAGTTGGAGCATCGACGACCCTCCATCGCGCG
TCCGGTAGCATCCGCTCCGCGCGTGATCCGGCTCGCCTCGCTGCCAGAGG
CGAAATCAGTGGCATTGCGATACTTTGATAGTTTGGGGTACCAATATCCT
TTTCTCCATCGCGAGGAGTTCATGGCCCATCTCGATCGCATCTATGCGGG
GGAGGTCCCCGCACCAGAGGTTCATCACTCGTATCACATCACCATCGCAA
CGGCCTTGTTGATCGGATCTGCCGACGAGTCACAGGCTGCCGAGTTCTAT
CATGTTAGCAATGAGACAATGACCTTGGCTTTGCAGAATGAAGATCTGGC
TGCTGTTCGAGCCCTTCTGAGCGTCGCTGTGTATACAATGTTTGCGACCA
CGGGCCCCAGCGTATGGCACATCCTCGGGACTACTTTGCGTCTCGCCACC
AGTCTCGGGCTGCATAAAGCCCGTCCAACGGGGAACGTGATAGAAGAGGA
GATGGCCAAGCGGGCGTTCTGGAGTCTCTACAACCTCGATCGACTGATCG
CAAGCACCCTTGGAAGGCCACTTGGAATTGCAGACGAGGATATCTCAATA
GGCTTGCCGCGGGAATTCAACGACAACTGGACAGAGACACCCGGAGCTAG
TGCTATGACCATTCCATTGCAGGTGGTGCGCCTGCGCCGGATATTCTCGC
GCATCTACCGCTACTTATTCAACAACCAACCGCCACCTCCTCCAACAGAG
GTTGCCATCACGCTCAGTCATTTCCGCCAGGAACTAGACGACTGGCGACA
GGAAGCACCGGTGTATGCGCCCGCGCTTCTGTACTCGACTAGCTACTACG
ACTATCTATACGCAACGACACTGCTCCTTATGTACCGGCCTAGTCCGCGT
AATCCGACACCTGATGCAACGAGCATCGTGAGCTGTGGCAATGCCAGCAT
TCAGGTCATTCGGTCCTACTGGGACAGCTATTCGCAGGGCAAGCTCAAGT
GGATCTGGTTGACCCTCAGCCAGGTTTACTTTGCCGGCATCACAATCCTG
TGGTGTCTTAACCATAATCTTCAGTCTGTCCGTGAAGGCCGTGGTGCTGC
GTGGAAGCCTGAGGATCAGAGCATGCGACGGGCCATCCAGGCAGTAGTTG
TTCTGCTGGAGGAATTTGGCAAGAGACGTCCGGGAGTGGACCGACTGGCG
GAGACGTTTCGGAACCAGAGCACGATGATCTTCAGCCATCTGGCATACCA
GCAGGAGCAGGAGCAGCAGCAGCAGCAGCTTCAACAACAACAACAGCCAC
AACCACTCCCGCCTCCACCGCAGCCACAGCCACAGCCACCAATACCACAC
CATCAAACGCTCTTGGAACAGCAGCCGCAGCAACAACCACAACAGCAGCA
GCAGCAGCAACAGCAACAACACATTTTGGTAGCACCGCCGGTGCCCCTAG
CGCCGGTGCTGGATGACGTTCTCCTGGTCAATGGATCGGGGAACGTGCCC
ATGATTGATCCACAACTGGCGGAGCAATTATTCTATTCCTATGACTGGTT
TCAGGAGGAGATGGCGACATACTATACCCTTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006596CBS51388_006596Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006596-T1.exon1CBS51388_006596-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006596-T1.exon2CBS51388_006596-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006596-T1.cdsCBS51388_006596-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006596-T1CBS51388_006596-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:279380..281132 +
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