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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:332441..334090- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006616-T1 ID=CBS51388_006616-T1|Name=CBS51388_006616-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1650bp|location=Sequence derived from alignment at An11:332441..334090- (Aspergillus niger CBS 513.88)
ATGTCGAAGAGATCTGCCGACGTTTCCGACGAGCAGAACGCCGCCCTCAA
GGCCGGTGAGCGTCCCGTCGTCGACGCCCCTCCCGACGAGGTGGGGGAGT
TCGAGGATGAGTATGAGGATGAGTTCGAGAGTGAGGACGAGGTTCTCGAG
GCTGGTGTAGATGGTCGTCCCGATGCTGAACGGGAGGAGGAAGAGAAAGG
TAAGATCTTGCGCCCATTGCGACGGGTTCTGCCAGTCGCATACTGCGATC
CTCGAATGTGGCAGTCATACTGACCCCGACTGGTCCCTTCAGATGCCATG
GACCTTGACAAGCAGACTTTTATTCCCGGAAGGACAAAATTGGCACCCGG
AGAGGTCCTCTCTCCCGATCCGTCTACTTACGACATGCTGCACACTCTCA
GCACCCCGTGGCCCTGTCTATCGTTCGATATCGTGCGCGATTCGTTGGGC
GACAACCGCAAGACTTATCCCGCCACTGTCTACGCCGTAACAGGCACACA
AGCAGAGGGCCGACGTGCAAAGGAGAATGAGCTGATGGTGTTGAAGCTAA
GTGGTATGAGCAAGATGGACAAGGAGGATGGCATGGATTCGGACAGCGAC
TCCGATTCGGACGACGACAGCGAGGCGATCCTGGAACACAAGAGCATTCC
TCTCGGATCGACGACCAACCGCATCCGCGCCCACCAGACCCCTAACCAGT
CCGGAGACTATTCCAAGCCCCCGCAGACTCTTACCGCCACTATGCTCGAG
AACTCCCAGGTCGTGATCCACGATGTTACCCCCCATCTCACCAGCTTCGA
TGTCCCTGGAACCATCCTCCCTCCCTCCGCCAACAAGCCCCTGTCTACCC
TCCGCATGCACAAGTCGGAGGGATACGCCCTCGACTGGTCTCCGCTACAG
CCCCTCGGCAAGCTGTTGACTGGTGACAATGACGGTTTGATCTACGTGAC
GACTCGCACTGAAGGCGGTGGCTGGGTCACCGACACTCGTCCGTTCACCG
GCCACATGTCGTCTGTTGAGGAGCTCCAGTGGTCTCCCAACGAGAAGAAC
GTTTTCGCCTCTGCCAGCAGTGACGGCAGTGTCAAGGTGTGGGACGTTCG
TTCGAAGTCGCGCAAGCCTGCTGTCGACGTGAAGGTGTCGAACACCGATG
TCAACGTCATGAGCTGGTCGAACCAGACTTTCCACCTCCTTGCGACAGGT
GCGGATGACGGACAGTGGGCCGTCTGGGATCTGAGACACTGGAAGCCGAA
TGCCGCGGCTCCGGGATCTCAGACCACAGCTTCCCCTGTTGCCTCGTTCG
ACTTCCACCGTGAGCCTGTCACGAGTATTGAGTGGCACCCGACCGACGAC
AGTGTCGTCGCGGTCGGTTCCGCCGACAACACGGTCACGCTGTGGGATTT
GGCTGTGGAACTGGATGAGGAGGAGAACCGTGAGGCGGGAATGCAGGAAG
TTCCGCCGCAGCTACTGTTCGTGCACTACATGGAGTCCGTCAAGGAAATC
CACTGGCAGGCCCAGATGCCCGGTACGATCATGGCTACGGGCGGTGTTGG
ATTTGGGTAAGTCATACTCCACTCTGTTTTTTTCTTTTTATTTTAAGGGA
CACTAAAGCTAACAAATCGAAACAGTGTGTTCAAGACAATCAGTGTGTAG
back to topCoding sequence (CDS) from alignment at An11:332441..334090- >CBS51388_006616-T1 ID=CBS51388_006616-T1|Name=CBS51388_006616-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4464bp|location=Sequence derived from alignment at An11:332441..334090- (Aspergillus niger CBS 513.88)
TGTGTTCAAGACAATCAGTGTGTAGATGCCATGGACCTTGACAAGCAGAC
TTTTATTCCCGGAAGGACAAAATTGGCACCCGGAGAGGTCCTCTCTCCCG
ATCCGTCTACTTACGACATGCTGCACACTCTCAGCACCCCGTGGCCCTGT
CTATCGTTCGATATCGTGCGCGATTCGTTGGGCGACAACCGCAAGACTTA
TCCCGCCACTGTCTACGCCGTAACAGGCACACAAGCAGAGGGCCGACGTG
CAAAGGAGAATGAGCTGATGGTGTTGAAGCTAAGTGGTATGAGCAAGATG
GACAAGGAGGATGGCATGGATTCGGACAGCGACTCCGATTCGGACGACGA
CAGCGAGGCGATCCTGGAACACAAGAGCATTCCTCTCGGATCGACGACCA
ACCGCATCCGCGCCCACCAGACCCCTAACCAGTCCGGAGACTATTCCAAG
CCCCCGCAGACTCTTACCGCCACTATGCTCGAGAACTCCCAGGTCGTGAT
CCACGATGTTACCCCCCATCTCACCAGCTTCGATGTCCCTGGAACCATCC
TCCCTCCCTCCGCCAACAAGCCCCTGTCTACCCTCCGCATGCACAAGTCG
GAGGGATACGCCCTCGACTGGTCTCCGCTACAGCCCCTCGGCAAGCTGTT
GACTGGTGACAATGACGGTTTGATCTACGTGACGACTCGCACTGAAGGCG
GTGGCTGGGTCACCGACACTCGTCCGTTCACCGGCCACATGTCGTCTGTT
GAGGAGCTCCAGTGGTCTCCCAACGAGAAGAACGTTTTCGCCTCTGCCAG
CAGTGACGGCAGTGTCAAGGTGTGGGACGTTCGTTCGAAGTCGCGCAAGC
CTGCTGTCGACGTGAAGGTGTCGAACACCGATGTCAACGTCATGAGCTGG
TCGAACCAGACTTTCCACCTCCTTGCGACAGGTGCGGATGACGGACAGTG
GGCCGTCTGGGATCTGAGACACTGGAAGCCGAATGCCGCGGCTCCGGGAT
CTCAGACCACAGCTTCCCCTGTTGCCTCGTTCGACTTCCACCGTGAGCCT
GTCACGAGTATTGAGTGGCACCCGACCGACGACAGTGTCGTCGCGGTCGG
TTCCGCCGACAACACGGTCACGCTGTGGGATTTGGCTGTGGAACTGGATG
AGGAGGAGAACCGTGAGGCGGGAATGCAGGAAGTTCCGCCGCAGCTACTG
TTCGTGCACTACATGGAGTCCGTCAAGGAAATCCACTGGCAGGCCCAGAT
GCCCGGTACGATCATGGCTACGGGCGGTGTTGGATTTGGATGTCGAAGAG
ATCTGCCGACGTTTCCGACGAGCAGAACGCCGCCCTCAAGGCCGGTGAGC
GTCCCGTCGTCGACGCCCCTCCCGACGAGGTGGGGGAGTTCGAGGATGAG
TATGAGGATGAGTTCGAGAGTGAGGACGAGGTTCTCGAGGCTGGTGTAGA
TGGTCGTCCCGATGCTGAACGGGAGGAGGAAGAGAAAGTGTGTTCAAGAC
AATCAGTGTGTAGATGCCATGGACCTTGACAAGCAGACTTTTATTCCCGG
AAGGACAAAATTGGCACCCGGAGAGGTCCTCTCTCCCGATCCGTCTACTT
ACGACATGCTGCACACTCTCAGCACCCCGTGGCCCTGTCTATCGTTCGAT
ATCGTGCGCGATTCGTTGGGCGACAACCGCAAGACTTATCCCGCCACTGT
CTACGCCGTAACAGGCACACAAGCAGAGGGCCGACGTGCAAAGGAGAATG
AGCTGATGGTGTTGAAGCTAAGTGGTATGAGCAAGATGGACAAGGAGGAT
GGCATGGATTCGGACAGCGACTCCGATTCGGACGACGACAGCGAGGCGAT
CCTGGAACACAAGAGCATTCCTCTCGGATCGACGACCAACCGCATCCGCG
CCCACCAGACCCCTAACCAGTCCGGAGACTATTCCAAGCCCCCGCAGACT
CTTACCGCCACTATGCTCGAGAACTCCCAGGTCGTGATCCACGATGTTAC
CCCCCATCTCACCAGCTTCGATGTCCCTGGAACCATCCTCCCTCCCTCCG
CCAACAAGCCCCTGTCTACCCTCCGCATGCACAAGTCGGAGGGATACGCC
CTCGACTGGTCTCCGCTACAGCCCCTCGGCAAGCTGTTGACTGGTGACAA
TGACGGTTTGATCTACGTGACGACTCGCACTGAAGGCGGTGGCTGGGTCA
CCGACACTCGTCCGTTCACCGGCCACATGTCGTCTGTTGAGGAGCTCCAG
TGGTCTCCCAACGAGAAGAACGTTTTCGCCTCTGCCAGCAGTGACGGCAG
TGTCAAGGTGTGGGACGTTCGTTCGAAGTCGCGCAAGCCTGCTGTCGACG
TGAAGGTGTCGAACACCGATGTCAACGTCATGAGCTGGTCGAACCAGACT
TTCCACCTCCTTGCGACAGGTGCGGATGACGGACAGTGGGCCGTCTGGGA
TCTGAGACACTGGAAGCCGAATGCCGCGGCTCCGGGATCTCAGACCACAG
CTTCCCCTGTTGCCTCGTTCGACTTCCACCGTGAGCCTGTCACGAGTATT
GAGTGGCACCCGACCGACGACAGTGTCGTCGCGGTCGGTTCCGCCGACAA
CACGGTCACGCTGTGGGATTTGGCTGTGGAACTGGATGAGGAGGAGAACC
GTGAGGCGGGAATGCAGGAAGTTCCGCCGCAGCTACTGTTCGTGCACTAC
ATGGAGTCCGTCAAGGAAATCCACTGGCAGGCCCAGATGCCCGGTACGAT
CATGGCTACGGGCGGTGTTGGATTTGGATGTCGAAGAGATCTGCCGACGT
TTCCGACGAGCAGAACGCCGCCCTCAAGGCCGGTGAGCGTCCCGTCGTCG
ACGCCCCTCCCGACGAGGTGGGGGAGTTCGAGGATGAGTATGAGGATGAG
TTCGAGAGTGAGGACGAGGTTCTCGAGGCTGGTGTAGATGGTCGTCCCGA
TGCTGAACGGGAGGAGGAAGAGAAAGTGTGTTCAAGACAATCAGTGTGTA
GATGCCATGGACCTTGACAAGCAGACTTTTATTCCCGGAAGGACAAAATT
GGCACCCGGAGAGGTCCTCTCTCCCGATCCGTCTACTTACGACATGCTGC
ACACTCTCAGCACCCCGTGGCCCTGTCTATCGTTCGATATCGTGCGCGAT
TCGTTGGGCGACAACCGCAAGACTTATCCCGCCACTGTCTACGCCGTAAC
AGGCACACAAGCAGAGGGCCGACGTGCAAAGGAGAATGAGCTGATGGTGT
TGAAGCTAAGTGGTATGAGCAAGATGGACAAGGAGGATGGCATGGATTCG
GACAGCGACTCCGATTCGGACGACGACAGCGAGGCGATCCTGGAACACAA
GAGCATTCCTCTCGGATCGACGACCAACCGCATCCGCGCCCACCAGACCC
CTAACCAGTCCGGAGACTATTCCAAGCCCCCGCAGACTCTTACCGCCACT
ATGCTCGAGAACTCCCAGGTCGTGATCCACGATGTTACCCCCCATCTCAC
CAGCTTCGATGTCCCTGGAACCATCCTCCCTCCCTCCGCCAACAAGCCCC
TGTCTACCCTCCGCATGCACAAGTCGGAGGGATACGCCCTCGACTGGTCT
CCGCTACAGCCCCTCGGCAAGCTGTTGACTGGTGACAATGACGGTTTGAT
CTACGTGACGACTCGCACTGAAGGCGGTGGCTGGGTCACCGACACTCGTC
CGTTCACCGGCCACATGTCGTCTGTTGAGGAGCTCCAGTGGTCTCCCAAC
GAGAAGAACGTTTTCGCCTCTGCCAGCAGTGACGGCAGTGTCAAGGTGTG
GGACGTTCGTTCGAAGTCGCGCAAGCCTGCTGTCGACGTGAAGGTGTCGA
ACACCGATGTCAACGTCATGAGCTGGTCGAACCAGACTTTCCACCTCCTT
GCGACAGGTGCGGATGACGGACAGTGGGCCGTCTGGGATCTGAGACACTG
GAAGCCGAATGCCGCGGCTCCGGGATCTCAGACCACAGCTTCCCCTGTTG
CCTCGTTCGACTTCCACCGTGAGCCTGTCACGAGTATTGAGTGGCACCCG
ACCGACGACAGTGTCGTCGCGGTCGGTTCCGCCGACAACACGGTCACGCT
GTGGGATTTGGCTGTGGAACTGGATGAGGAGGAGAACCGTGAGGCGGGAA
TGCAGGAAGTTCCGCCGCAGCTACTGTTCGTGCACTACATGGAGTCCGTC
AAGGAAATCCACTGGCAGGCCCAGATGCCCGGTACGATCATGGCTACGGG
CGGTGTTGGATTTGGATGTCGAAGAGATCTGCCGACGTTTCCGACGAGCA
GAACGCCGCCCTCAAGGCCGGTGAGCGTCCCGTCGTCGACGCCCCTCCCG
ACGAGGTGGGGGAGTTCGAGGATGAGTATGAGGATGAGTTCGAGAGTGAG
GACGAGGTTCTCGAGGCTGGTGTAGATGGTCGTCCCGATGCTGAACGGGA
GGAGGAAGAGAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262DC1 |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR022052 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF12265 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:332441..334090 - |
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