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CBS51388_006617-T1, CBS51388_006617-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006617-T1
Unique NameCBS51388_006617-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:334924..336020+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006617-T1 ID=CBS51388_006617-T1|Name=CBS51388_006617-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1097bp|location=Sequence derived from alignment at An11:334924..336020+ (Aspergillus niger CBS 513.88)
ATGGATGCGTCACAACTGCCCGTGGCCGGCACTTCGGATGTCGCAAATCA
GGCGCATCTGGAGCAATCCCAGAGCCTCGATACACCCGCTCCCGCAAGCC
TCGGACTGGCGGGACCAGACGAGTTCACAAGCACAAATGGCTACAGTAGC
GACTCGCGCGCCCACTACTCCTCCCACGAATTCAACTCTCCGGCTCGCGA
TTTTCACAATGAAAACGATCAACCTCGACAGAACTTCTCCCCGCTGACCC
ATCAGCCGCAACCATTATCGTCATCCCGGCCCAGCTCCGAAATGTCCACC
AGCCTGCCTCAGCCTACGCACGATGTCAGCCAAAAGCAGCCGTCGCAGTC
AACCAAGAACAGCGTGGTGATCAAGGTGGGTATGGTCGGAGATGCCCAGA
TCGGAAAAACCAGTTTAATGGTGAAATATGTGGAGGGTAGTTGGGACGAG
GATTATATCCAGACTCTCGGTATGCAGCGGATTCTTTGCGCGGCTAGGAA
TGAATAATGCTGACCGCGATCTTAAGGTGTCAACTTCATGGAGAAGACCA
TCTCCATTCGGAATACGGAGATTACGTTCTCGATTTGGGATCTGGGTGGC
CAGCGTGAATTCGTCAACATGCTTCCCCTTGTGTGCAACGATGCTGTCGC
CATTCTGTTCATGTTCGATCTCACGCGGAAAAGCACTCTGAACTCAATTA
AGGAATGGTACCGACAAGGTCGTGGGTTCAACAAGACTGCCATCCCCTTC
CTGATCGGTACCAAATATGACCATTTCGTCAACTTTCCCCGCGAAGACCA
GGAAGAGATCTCGATTCAGGTAGGCGAGAATGCATATGAGGTGTCTTAGC
GCGCACTGACCACCTATAGGCGAAACGGTTTGCCAAGGCCATGAAAGCTA
GTTTAATTTTTAGCAGTACGAGTCACAGCATCAACGTGCAGAAGGTATGT
CCCGATGTGTGAAGTTATACCCTGTTGCTAGTGTTGACAGCGTGATAGAT
CTTCAAGATCGTCTTGGCCAAGGCTTTTGACCTCAAGTGCACGATTCCCG
AGATCGAAAATGTTGGCGAACCCCTGCTACTGTATAAGAACGTCTGA
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Coding sequence (CDS) from alignment at An11:334924..336020+

>CBS51388_006617-T1 ID=CBS51388_006617-T1|Name=CBS51388_006617-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3744bp|location=Sequence derived from alignment at An11:334924..336020+ (Aspergillus niger CBS 513.88)
ATGGATGCGTCACAACTGCCCGTGGCCGGCACTTCGGATGTCGCAAATCA
GGCGCATCTGGAGCAATCCCAGAGCCTCGATACACCCGCTCCCGCAAGCC
TCGGACTGGCGGGACCAGACGAGTTCACAAGCACAAATGGCTACAGTAGC
GACTCGCGCGCCCACTACTCCTCCCACGAATTCAACTCTCCGGCTCGCGA
TTTTCACAATGAAAACGATCAACCTCGACAGAACTTCTCCCCGCTGACCC
ATCAGCCGCAACCATTATCGTCATCCCGGCCCAGCTCCGAAATGTCCACC
AGCCTGCCTCAGCCTACGCACGATGTCAGCCAAAAGCAGCCGTCGCAGTC
AACCAAGAACAGCGTGGTGATCAAGGTGGGTATGGTCGGAGATGCCCAGA
TCGGAAAAACCAGTTTAATGGTGAAATATGTGGAGGGTAGTTGGGACGAG
GATTATATCCAGACTCTCGGTGTCAACTTCATGGAGAAGACCATCTCCAT
TCGGAATACGGAGATTACGTTCTCGATTTGGGATCTGGGTGGCCAGCGTG
AATTCGTCAACATGCTTCCCCTTGTGTGCAACGATGCTGTCGCCATTCTG
TTCATGTTCGATCTCACGCGGAAAAGCACTCTGAACTCAATTAAGGAATG
GTACCGACAAGGTCGTGGGTTCAACAAGACTGCCATCCCCTTCCTGATCG
GTACCAAATATGACCATTTCGTCAACTTTCCCCGCGAAGACCAGGAAGAG
ATCTCGATTCAGGCGAAACGGTTTGCCAAGGCCATGAAAGCTAGTTTAAT
TTTTAGCAGTACGAGTCACAGCATCAACGTGCAGAAGATCTTCAAGATCG
TCTTGGCCAAGGCTTTTGACCTCAAGTGCACGATTCCCGAGATCGAAAAT
GTTGGCGAACCCCTGCTACTGTATAAGAACGTCTGAATGGATGCGTCACA
ACTGCCCGTGGCCGGCACTTCGGATGTCGCAAATCAGGCGCATCTGGAGC
AATCCCAGAGCCTCGATACACCCGCTCCCGCAAGCCTCGGACTGGCGGGA
CCAGACGAGTTCACAAGCACAAATGGCTACAGTAGCGACTCGCGCGCCCA
CTACTCCTCCCACGAATTCAACTCTCCGGCTCGCGATTTTCACAATGAAA
ACGATCAACCTCGACAGAACTTCTCCCCGCTGACCCATCAGCCGCAACCA
TTATCGTCATCCCGGCCCAGCTCCGAAATGTCCACCAGCCTGCCTCAGCC
TACGCACGATGTCAGCCAAAAGCAGCCGTCGCAGTCAACCAAGAACAGCG
TGGTGATCAAGGTGGGTATGGTCGGAGATGCCCAGATCGGAAAAACCAGT
TTAATGGTGAAATATGTGGAGGGTAGTTGGGACGAGGATTATATCCAGAC
TCTCGGTGTCAACTTCATGGAGAAGACCATCTCCATTCGGAATACGGAGA
TTACGTTCTCGATTTGGGATCTGGGTGGCCAGCGTGAATTCGTCAACATG
CTTCCCCTTGTGTGCAACGATGCTGTCGCCATTCTGTTCATGTTCGATCT
CACGCGGAAAAGCACTCTGAACTCAATTAAGGAATGGTACCGACAAGGTC
GTGGGTTCAACAAGACTGCCATCCCCTTCCTGATCGGTACCAAATATGAC
CATTTCGTCAACTTTCCCCGCGAAGACCAGGAAGAGATCTCGATTCAGGC
GAAACGGTTTGCCAAGGCCATGAAAGCTAGTTTAATTTTTAGCAGTACGA
GTCACAGCATCAACGTGCAGAAGATCTTCAAGATCGTCTTGGCCAAGGCT
TTTGACCTCAAGTGCACGATTCCCGAGATCGAAAATGTTGGCGAACCCCT
GCTACTGTATAAGAACGTCTGAATGGATGCGTCACAACTGCCCGTGGCCG
GCACTTCGGATGTCGCAAATCAGGCGCATCTGGAGCAATCCCAGAGCCTC
GATACACCCGCTCCCGCAAGCCTCGGACTGGCGGGACCAGACGAGTTCAC
AAGCACAAATGGCTACAGTAGCGACTCGCGCGCCCACTACTCCTCCCACG
AATTCAACTCTCCGGCTCGCGATTTTCACAATGAAAACGATCAACCTCGA
CAGAACTTCTCCCCGCTGACCCATCAGCCGCAACCATTATCGTCATCCCG
GCCCAGCTCCGAAATGTCCACCAGCCTGCCTCAGCCTACGCACGATGTCA
GCCAAAAGCAGCCGTCGCAGTCAACCAAGAACAGCGTGGTGATCAAGGTG
GGTATGGTCGGAGATGCCCAGATCGGAAAAACCAGTTTAATGGTGAAATA
TGTGGAGGGTAGTTGGGACGAGGATTATATCCAGACTCTCGGTGTCAACT
TCATGGAGAAGACCATCTCCATTCGGAATACGGAGATTACGTTCTCGATT
TGGGATCTGGGTGGCCAGCGTGAATTCGTCAACATGCTTCCCCTTGTGTG
CAACGATGCTGTCGCCATTCTGTTCATGTTCGATCTCACGCGGAAAAGCA
CTCTGAACTCAATTAAGGAATGGTACCGACAAGGTCGTGGGTTCAACAAG
ACTGCCATCCCCTTCCTGATCGGTACCAAATATGACCATTTCGTCAACTT
TCCCCGCGAAGACCAGGAAGAGATCTCGATTCAGGCGAAACGGTTTGCCA
AGGCCATGAAAGCTAGTTTAATTTTTAGCAGTACGAGTCACAGCATCAAC
GTGCAGAAGATCTTCAAGATCGTCTTGGCCAAGGCTTTTGACCTCAAGTG
CACGATTCCCGAGATCGAAAATGTTGGCGAACCCCTGCTACTGTATAAGA
ACGTCTGAATGGATGCGTCACAACTGCCCGTGGCCGGCACTTCGGATGTC
GCAAATCAGGCGCATCTGGAGCAATCCCAGAGCCTCGATACACCCGCTCC
CGCAAGCCTCGGACTGGCGGGACCAGACGAGTTCACAAGCACAAATGGCT
ACAGTAGCGACTCGCGCGCCCACTACTCCTCCCACGAATTCAACTCTCCG
GCTCGCGATTTTCACAATGAAAACGATCAACCTCGACAGAACTTCTCCCC
GCTGACCCATCAGCCGCAACCATTATCGTCATCCCGGCCCAGCTCCGAAA
TGTCCACCAGCCTGCCTCAGCCTACGCACGATGTCAGCCAAAAGCAGCCG
TCGCAGTCAACCAAGAACAGCGTGGTGATCAAGGTGGGTATGGTCGGAGA
TGCCCAGATCGGAAAAACCAGTTTAATGGTGAAATATGTGGAGGGTAGTT
GGGACGAGGATTATATCCAGACTCTCGGTGTCAACTTCATGGAGAAGACC
ATCTCCATTCGGAATACGGAGATTACGTTCTCGATTTGGGATCTGGGTGG
CCAGCGTGAATTCGTCAACATGCTTCCCCTTGTGTGCAACGATGCTGTCG
CCATTCTGTTCATGTTCGATCTCACGCGGAAAAGCACTCTGAACTCAATT
AAGGAATGGTACCGACAAGGTCGTGGGTTCAACAAGACTGCCATCCCCTT
CCTGATCGGTACCAAATATGACCATTTCGTCAACTTTCCCCGCGAAGACC
AGGAAGAGATCTCGATTCAGGCGAAACGGTTTGCCAAGGCCATGAAAGCT
AGTTTAATTTTTAGCAGTACGAGTCACAGCATCAACGTGCAGAAGATCTT
CAAGATCGTCTTGGCCAAGGCTTTTGACCTCAAGTGCACGATTCCCGAGA
TCGAAAATGTTGGCGAACCCCTGCTACTGTATAAGAACGTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPG1CBS51388_006617Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006617-T1.exon1CBS51388_006617-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006617-T1.exon2CBS51388_006617-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006617-T1.exon3CBS51388_006617-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006617-T1.exon4CBS51388_006617-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006617-T1.cdsCBS51388_006617-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006617-T1CBS51388_006617-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092644X6
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR017231
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
Productseptum-promoting GTP-binding protein 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:334924..336020 +
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