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CBS51388_006634-T1, CBS51388_006634-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006634-T1
Unique NameCBS51388_006634-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:378916..380090+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006634-T1 ID=CBS51388_006634-T1|Name=CBS51388_006634-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1175bp|location=Sequence derived from alignment at An11:378916..380090+ (Aspergillus niger CBS 513.88)
ATGAGACTTCCGCTTGTTAGCTCGACAATCGCTCTCCTTTCCAGCGCCAG
CTTAGTTGCAGCGCAGACATACACCAATTGTAACCCATTGAAAAAATGTA
AGTGTCCAAATCGTGCGTGTGATGGGCATGCGCAGCTAATACTTCTAAAG
CATGCCCCGCGGATCCCGCACTTGGGAAATCAGCGAGCTATGACTTCACC
CAAGGTAGTTCTTCCGACTTTACTGCAACCGGTAGCCCGACCTATGGTAA
AGATGGTGCCGAATTCACCGTGGCTGAGCAGGGCGATGCGCCATTGATCC
AGTCCAACTGGTACATCATGTTTGGGCACGTGGAATACGTGATTAAGGCT
GCCCCCGGAACGGGTATTGTCAGCAGTGCCGTTCTGCAGTCAGATGATTT
GGATGAGATCGACTGGGAATGGCTTGGAGGGAACGATCAGCTTGTGCAAA
CGAACTATTTCGGCAAAGGAGATACCAGTAGTTACAATCGTGGAGCTACC
CATAATGATCCTGGGAACCATGACGACTTTCACACCTATACCGTGGACTG
GACGAGCAAGCAAATCGTCTGGCAAATCGATGGCACAACGGTCAGAGTGC
TTACGCCGGACACTGCTGATACGAATCAGTACCCCCAAACTCCCATGGTG
GTCAAAGTAGGAATCTGGGCTGGTGGCGATCCCAGTAACCCTCAGGGCAC
AATCGGTGAGTGTCTAGCCCCTTGTCACTGCAATATTCCCTTTCCCCTGG
TGTGCAATATGCTGATCTTTGTCTTAGATTGGGCTGGTGGCACGACCGAT
TACAGCGCCGGACCTTACACAATGTATTTGAAGTCTCTCAAAGTGACGGA
TTATTCGACCGGCTCGTCATACTCATATGGTGATGAGAGCGGGGACTGGA
CGTCAATTACTGCCAATGGGGGTCAGGTTAATGGGAACATTGGGGCCGAT
ACGATGACCTCAATTGAGTCAGCACCCACTGTGACGTCGACGGTTGCCAG
TATTCCTATCCCTTGGAGCGGCACTCATCGTGAAACATCCAGCTTTGTGA
CTCCAGATGTTTGGCCTTGGGTTGCGACAGCAACATCGACATCGCTGCCT
GCTGGCTGGACCTATTCTGGTTCTCGGCAAACCCAGCCGCCTAGTGCGGC
TTCTGTGAGTGAGCATTTCCCTTAA
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Coding sequence (CDS) from alignment at An11:378916..380090+

>CBS51388_006634-T1 ID=CBS51388_006634-T1|Name=CBS51388_006634-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3150bp|location=Sequence derived from alignment at An11:378916..380090+ (Aspergillus niger CBS 513.88)
ATGAGACTTCCGCTTGTTAGCTCGACAATCGCTCTCCTTTCCAGCGCCAG
CTTAGTTGCAGCGCAGACATACACCAATTGTAACCCATTGAAAAAATCAT
GCCCCGCGGATCCCGCACTTGGGAAATCAGCGAGCTATGACTTCACCCAA
GGTAGTTCTTCCGACTTTACTGCAACCGGTAGCCCGACCTATGGTAAAGA
TGGTGCCGAATTCACCGTGGCTGAGCAGGGCGATGCGCCATTGATCCAGT
CCAACTGGTACATCATGTTTGGGCACGTGGAATACGTGATTAAGGCTGCC
CCCGGAACGGGTATTGTCAGCAGTGCCGTTCTGCAGTCAGATGATTTGGA
TGAGATCGACTGGGAATGGCTTGGAGGGAACGATCAGCTTGTGCAAACGA
ACTATTTCGGCAAAGGAGATACCAGTAGTTACAATCGTGGAGCTACCCAT
AATGATCCTGGGAACCATGACGACTTTCACACCTATACCGTGGACTGGAC
GAGCAAGCAAATCGTCTGGCAAATCGATGGCACAACGGTCAGAGTGCTTA
CGCCGGACACTGCTGATACGAATCAGTACCCCCAAACTCCCATGGTGGTC
AAAGTAGGAATCTGGGCTGGTGGCGATCCCAGTAACCCTCAGGGCACAAT
CGATTGGGCTGGTGGCACGACCGATTACAGCGCCGGACCTTACACAATGT
ATTTGAAGTCTCTCAAAGTGACGGATTATTCGACCGGCTCGTCATACTCA
TATGGTGATGAGAGCGGGGACTGGACGTCAATTACTGCCAATGGGGGTCA
GGTTAATGGGAACATTGGGGCCGATACGATGACCTCAATTGAGTCAGCAC
CCACTGTGACGTCGACGGTTGCCAGTATTCCTATCCCTTGGAGCGGCACT
CATCGTGAAACATCCAGCTTTGTGACTCCAGATGTTTGGCCTTGGGTTGC
GACAGCAACATCGACATCGCTGCCTGCTGGCTGGACCTATTCTGGTTCTC
GGCAAACCCAGCCGCCTAGTGCGGCTTCTGTGAGTGAGCATTTCCCTTAA
ATGAGACTTCCGCTTGTTAGCTCGACAATCGCTCTCCTTTCCAGCGCCAG
CTTAGTTGCAGCGCAGACATACACCAATTGTAACCCATTGAAAAAATCAT
GCCCCGCGGATCCCGCACTTGGGAAATCAGCGAGCTATGACTTCACCCAA
GGTAGTTCTTCCGACTTTACTGCAACCGGTAGCCCGACCTATGGTAAAGA
TGGTGCCGAATTCACCGTGGCTGAGCAGGGCGATGCGCCATTGATCCAGT
CCAACTGGTACATCATGTTTGGGCACGTGGAATACGTGATTAAGGCTGCC
CCCGGAACGGGTATTGTCAGCAGTGCCGTTCTGCAGTCAGATGATTTGGA
TGAGATCGACTGGGAATGGCTTGGAGGGAACGATCAGCTTGTGCAAACGA
ACTATTTCGGCAAAGGAGATACCAGTAGTTACAATCGTGGAGCTACCCAT
AATGATCCTGGGAACCATGACGACTTTCACACCTATACCGTGGACTGGAC
GAGCAAGCAAATCGTCTGGCAAATCGATGGCACAACGGTCAGAGTGCTTA
CGCCGGACACTGCTGATACGAATCAGTACCCCCAAACTCCCATGGTGGTC
AAAGTAGGAATCTGGGCTGGTGGCGATCCCAGTAACCCTCAGGGCACAAT
CGATTGGGCTGGTGGCACGACCGATTACAGCGCCGGACCTTACACAATGT
ATTTGAAGTCTCTCAAAGTGACGGATTATTCGACCGGCTCGTCATACTCA
TATGGTGATGAGAGCGGGGACTGGACGTCAATTACTGCCAATGGGGGTCA
GGTTAATGGGAACATTGGGGCCGATACGATGACCTCAATTGAGTCAGCAC
CCACTGTGACGTCGACGGTTGCCAGTATTCCTATCCCTTGGAGCGGCACT
CATCGTGAAACATCCAGCTTTGTGACTCCAGATGTTTGGCCTTGGGTTGC
GACAGCAACATCGACATCGCTGCCTGCTGGCTGGACCTATTCTGGTTCTC
GGCAAACCCAGCCGCCTAGTGCGGCTTCTGTGAGTGAGCATTTCCCTTAA
ATGAGACTTCCGCTTGTTAGCTCGACAATCGCTCTCCTTTCCAGCGCCAG
CTTAGTTGCAGCGCAGACATACACCAATTGTAACCCATTGAAAAAATCAT
GCCCCGCGGATCCCGCACTTGGGAAATCAGCGAGCTATGACTTCACCCAA
GGTAGTTCTTCCGACTTTACTGCAACCGGTAGCCCGACCTATGGTAAAGA
TGGTGCCGAATTCACCGTGGCTGAGCAGGGCGATGCGCCATTGATCCAGT
CCAACTGGTACATCATGTTTGGGCACGTGGAATACGTGATTAAGGCTGCC
CCCGGAACGGGTATTGTCAGCAGTGCCGTTCTGCAGTCAGATGATTTGGA
TGAGATCGACTGGGAATGGCTTGGAGGGAACGATCAGCTTGTGCAAACGA
ACTATTTCGGCAAAGGAGATACCAGTAGTTACAATCGTGGAGCTACCCAT
AATGATCCTGGGAACCATGACGACTTTCACACCTATACCGTGGACTGGAC
GAGCAAGCAAATCGTCTGGCAAATCGATGGCACAACGGTCAGAGTGCTTA
CGCCGGACACTGCTGATACGAATCAGTACCCCCAAACTCCCATGGTGGTC
AAAGTAGGAATCTGGGCTGGTGGCGATCCCAGTAACCCTCAGGGCACAAT
CGATTGGGCTGGTGGCACGACCGATTACAGCGCCGGACCTTACACAATGT
ATTTGAAGTCTCTCAAAGTGACGGATTATTCGACCGGCTCGTCATACTCA
TATGGTGATGAGAGCGGGGACTGGACGTCAATTACTGCCAATGGGGGTCA
GGTTAATGGGAACATTGGGGCCGATACGATGACCTCAATTGAGTCAGCAC
CCACTGTGACGTCGACGGTTGCCAGTATTCCTATCCCTTGGAGCGGCACT
CATCGTGAAACATCCAGCTTTGTGACTCCAGATGTTTGGCCTTGGGTTGC
GACAGCAACATCGACATCGCTGCCTGCTGGCTGGACCTATTCTGGTTCTC
GGCAAACCCAGCCGCCTAGTGCGGCTTCTGTGAGTGAGCATTTCCCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005618cell wall
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798hydrolase activity, acting on glycosyl bonds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0071555cell wall organization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006634CBS51388_006634Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006634-T1.exon1CBS51388_006634-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006634-T1.exon2CBS51388_006634-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006634-T1.exon3CBS51388_006634-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006634-T1.cdsCBS51388_006634-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006634-T1CBS51388_006634-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:GH16
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR000757
DBxrefInterPro:IPR017168
DBxrefPFAM:PF00722
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:378916..380090 +
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