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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:432680..433629+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006651-T1 ID=CBS51388_006651-T1|Name=CBS51388_006651-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=950bp|location=Sequence derived from alignment at An11:432680..433629+ (Aspergillus niger CBS 513.88)
ATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGGATGTTCTG
GTAAGTGGGCCGCCGTCCCAATAAGTAATCGCTTTTTCTCCGGGAATGGT
TCCCCCCTCCTCGGCCCGTCCCCGCAGATAAGGAATCATTCGATTTGCTA
AGATGATATATTTCGCACCCGCAGGGCGACAGAGATGGATGTCACCATGA
TTGGTCTCCAGAATGCAGGAAAGTCTTCGTTGTTGCGCGTGCTTGCGGTA
TGTCTTTTCACCCCCACGGCAACTGAACATCTTCCCGTGTTATCGGTCCT
CGGCGCTAATCCCGCAGTATAGGGCGGCGAGTTCACTGTAGAGTAAGTCT
CCATCGTGTAGGGCCTGGCCTGACTGCGCGACACTGGGTTGTCTGGCTAA
ACCTTGTTTCAGTTCTATTCCCACGATCGGGTTCAACACGAAACGAGTCC
AAAAGGGCCATGTGACTCTCAAATGGTTGGTGACCCAGAGCTGAGCCTTG
AGACGCCTGTGCGCAATCAATGTATCTAATATCCATCCAGCTGGGATCTA
GGTGGACAGCCACGGTTTCGACCGATGTGGGAGCGATACTGTCGGGGAGT
AAATGCGATCGTGTAAGTGCCTCGACTTTGTCTGACACAGGTCTCGGTAT
CCTAGCAGCGCTAACAACCCGACCAGATACATTGTGGATGCAGCAGATCG
GGCTGCCTTACCCGTAGCCAAGGAGGAATTGCATGAGCTAATGGGCAAAG
AGACGCTCAATGGGATTCCGCTGTTGGTCCTCGGGAATAAGTCCGACCTT
CCGGAGAAGCTGTCGGTCGACGACCTGATCCACGAGATGGACCTGAAATC
CATCACTCATCGCGAAGTGAGCTGTTATGGGATCAGCGCTAAAGAGGAGA
CAAACCTCGATGCTGTTCTGCATTGGTTAATTGCTCGAGCCAGTCGATGA
back to topCoding sequence (CDS) from alignment at An11:432680..433629+ >CBS51388_006651-T1 ID=CBS51388_006651-T1|Name=CBS51388_006651-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3312bp|location=Sequence derived from alignment at An11:432680..433629+ (Aspergillus niger CBS 513.88)
ATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGGATGTTCTG
GGCGACAGAGATGGATGTCACCATGATTGGTCTCCAGAATGCAGGAAAGT
CTTCGTTGTTGCGCGTGCTTGCGGGCGGCGAGTTCACTGTAGATTCTATT
CCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCCATGTGACTCT
CAAATGCTGGGATCTAGGTGGACAGCCACGGTTTCGACCGATGTGGGAGC
GATACTGTCGGGGAGTAAATGCGATCGTATACATTGTGGATGCAGCAGAT
CGGGCTGCCTTACCCGTAGCCAAGGAGGAATTGCATGAGCTAATGGGCAA
AGAGACGCTCAATGGGATTCCGCTGTTGGTCCTCGGGAATAAGTCCGACC
TTCCGGAGAAGCTGTCGGTCGACGACCTGATCCACGAGATGGACCTGAAA
TCCATCACTCATCGCGAAGTGAGCTGTTATGGGATCAGCGCTAAAGAGGA
GACAAACCTCGATGCTGTTCTGCATTGGTTAATTGCTCGAGCCAGTCGAT
GAATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGGATGTTC
TGGGCGACAGAGATGGATGTCACCATGATTGGTCTCCAGAATGCAGGAAA
GTCTTCGTTGTTGCGCGTGCTTGCGGGCGGCGAGTTCACTGTAGATTCTA
TTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCCATGTGACT
CTCAAATGCTGGGATCTAGGTGGACAGCCACGGTTTCGACCGATGTGGGA
GCGATACTGTCGGGGAGTAAATGCGATCGTATACATTGTGGATGCAGCAG
ATCGGGCTGCCTTACCCGTAGCCAAGGAGGAATTGCATGAGCTAATGGGC
AAAGAGACGCTCAATGGGATTCCGCTGTTGGTCCTCGGGAATAAGTCCGA
CCTTCCGGAGAAGCTGTCGGTCGACGACCTGATCCACGAGATGGACCTGA
AATCCATCACTCATCGCGAAGTGAGCTGTTATGGGATCAGCGCTAAAGAG
GAGACAAACCTCGATGCTGTTCTGCATTGGTTAATTGCTCGAGCCAGTCG
ATGAATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGGATGT
TCTGGGCGACAGAGATGGATGTCACCATGATTGGTCTCCAGAATGCAGGA
AAGTCTTCGTTGTTGCGCGTGCTTGCGGGCGGCGAGTTCACTGTAGATTC
TATTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCCATGTGA
CTCTCAAATGCTGGGATCTAGGTGGACAGCCACGGTTTCGACCGATGTGG
GAGCGATACTGTCGGGGAGTAAATGCGATCGTATACATTGTGGATGCAGC
AGATCGGGCTGCCTTACCCGTAGCCAAGGAGGAATTGCATGAGCTAATGG
GCAAAGAGACGCTCAATGGGATTCCGCTGTTGGTCCTCGGGAATAAGTCC
GACCTTCCGGAGAAGCTGTCGGTCGACGACCTGATCCACGAGATGGACCT
GAAATCCATCACTCATCGCGAAGTGAGCTGTTATGGGATCAGCGCTAAAG
AGGAGACAAACCTCGATGCTGTTCTGCATTGGTTAATTGCTCGAGCCAGT
CGATGAATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGGAT
GTTCTGGGCGACAGAGATGGATGTCACCATGATTGGTCTCCAGAATGCAG
GAAAGTCTTCGTTGTTGCGCGTGCTTGCGGGCGGCGAGTTCACTGTAGAT
TCTATTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCCATGT
GACTCTCAAATGCTGGGATCTAGGTGGACAGCCACGGTTTCGACCGATGT
GGGAGCGATACTGTCGGGGAGTAAATGCGATCGTATACATTGTGGATGCA
GCAGATCGGGCTGCCTTACCCGTAGCCAAGGAGGAATTGCATGAGCTAAT
GGGCAAAGAGACGCTCAATGGGATTCCGCTGTTGGTCCTCGGGAATAAGT
CCGACCTTCCGGAGAAGCTGTCGGTCGACGACCTGATCCACGAGATGGAC
CTGAAATCCATCACTCATCGCGAAGTGAGCTGTTATGGGATCAGCGCTAA
AGAGGAGACAAACCTCGATGCTGTTCTGCATTGGTTAATTGCTCGAGCCA
GTCGATGAATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGG
ATGTTCTGGGCGACAGAGATGGATGTCACCATGATTGGTCTCCAGAATGC
AGGAAAGTCTTCGTTGTTGCGCGTGCTTGCGGGCGGCGAGTTCACTGTAG
ATTCTATTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCCAT
GTGACTCTCAAATGCTGGGATCTAGGTGGACAGCCACGGTTTCGACCGAT
GTGGGAGCGATACTGTCGGGGAGTAAATGCGATCGTATACATTGTGGATG
CAGCAGATCGGGCTGCCTTACCCGTAGCCAAGGAGGAATTGCATGAGCTA
ATGGGCAAAGAGACGCTCAATGGGATTCCGCTGTTGGTCCTCGGGAATAA
GTCCGACCTTCCGGAGAAGCTGTCGGTCGACGACCTGATCCACGAGATGG
ACCTGAAATCCATCACTCATCGCGAAGTGAGCTGTTATGGGATCAGCGCT
AAAGAGGAGACAAACCTCGATGCTGTTCTGCATTGGTTAATTGCTCGAGC
CAGTCGATGAATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGA
GGATGTTCTGGGCGACAGAGATGGATGTCACCATGATTGGTCTCCAGAAT
GCAGGAAAGTCTTCGTTGTTGCGCGTGCTTGCGGGCGGCGAGTTCACTGT
AGATTCTATTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCC
ATGTGACTCTCAAATGCTGGGATCTAGGTGGACAGCCACGGTTTCGACCG
ATGTGGGAGCGATACTGTCGGGGAGTAAATGCGATCGTATACATTGTGGA
TGCAGCAGATCGGGCTGCCTTACCCGTAGCCAAGGAGGAATTGCATGAGC
TAATGGGCAAAGAGACGCTCAATGGGATTCCGCTGTTGGTCCTCGGGAAT
AAGTCCGACCTTCCGGAGAAGCTGTCGGTCGACGACCTGATCCACGAGAT
GGACCTGAAATCCATCACTCATCGCGAAGTGAGCTGTTATGGGATCAGCG
CTAAAGAGGAGACAAACCTCGATGCTGTTCTGCATTGGTTAATTGCTCGA
GCCAGTCGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR005225 |
| DBxref | InterPro:IPR006689 |
| DBxref | PFAM:PF09439 |
| DBxref | PFAM:PF08477 |
| DBxref | PFAM:PF00071 |
| DBxref | PFAM:PF01926 |
| DBxref | PFAM:PF04670 |
| DBxref | PFAM:PF00025 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:432680..433629 + |
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