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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:469010..470938- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006660-T1 ID=CBS51388_006660-T1|Name=CBS51388_006660-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1929bp|location=Sequence derived from alignment at An11:469010..470938- (Aspergillus niger CBS 513.88)
ATGGATTTTCCCACTAGTCTCGACTTTTTCCCTGCAGAGCTTGTCATCTG
GATAGGTGAATTCTTGGACCGGAAGACATTGGCCGCCTTTATCCGTACAT
CGAAGCGATATGCCCAGCTCTTGACACCCCAGCTTTTAACTCTGTGGCTC
TCGTGCAAAACTGGCAAGTATTGCTTCAGGCGTAATTGGCCTGAAACACA
GAATTGGAAGTCATCTCATATAGTCGATTTTTTCCAGAACTTCCCGTCTG
ATGTATCTCAGATCTACTGTTGCTCTACATTGCTGTTTCGGTTTGCCGAT
GGAGGTAACCTAGAGCTCGTGAAGCTCATGTTATCTAGGGGCGCAGATCT
CGAGGCAAAAGGCGCGAATGGGGAGACTCCTCTGCATATTGCTACCAGTG
GAGGACATATTCAGGTCGTGCAGGCATTGCTGGAAGCCGGGGCAGATGCC
AGTGCCAAAGACAGGTATGGAGATACACTACTGCAGAGAGCGGCATCCAT
GGGGAAGCCGGCCATGATCCGATACCTGATTAGCTCAGGACAATACACGC
TGGAAGCCCTACTGGAAGCGTTTGAACGGGGTATGAAGTGCTTCTTCCCA
AAAGTCTGTGCAGAAGTCTGTGCAGAAGTCTGGCCCGCTCTCGAAAATGC
CGGCTATAAGTTCAACGCGACTGGCACTGACGGTCAAATATACCTTCACT
TCGCCGCTAAGAGAGGACTTAGCTTTCTTGTGCAGTTCTTTCTTGATAGG
GGCCATGACCCCTTTCGCTTGGATGAAAAGGGAAATACAGCCTTGAGCAT
CGCCTGCTCAGAAGTTTTTTCTCGCTCGGAGGATATGTTAGAAACTCCGA
AGCTACTCATTAACGCAATGCAAGCCGCTGGCGGTGACCCTTTCAAAGCA
AACCGAGAGGGTGTTACTCCACTGCACAAAGCCATTCAGAAATCGCAGGT
TGATCTAGTCAGATTATTTCTCGATTCCGGAGCAAGTGTGACTGCTCGGG
GTAAGAATGGGATTAAATGCATGGAAAGAGCACTACGAGGTCCTAGAGAT
ATGTTTGAGCTGCTCGTTGACCGTGAACCCGCCTTATGGCCCACCCACAT
GCTACAATCAAGCCTTCATGGTTATACAGTCGAGTTGAAAAAAGGACAAG
GTTACCAGGATACTCCGAAGGCTATAGCAAGGATCCTGAAACTCGCCAAA
TCTGGCAAGGCAGCAATCAATGTCTCCACCAGGGACAGCTCGGGATCTAC
TCCGCTTCATAATACATGTCTGGCTAGGCACAACTCTGCTGAGGTTCCTG
GGCTCATTCGCTCTTTCATCGAAGCAGGGGCAGATATAGACATGCCAGAT
GACGAAGGCCGAACACCTCTCCACAATATACTCAGGGTATCTACTCCAAA
ATCTGAGCGGGAGATCATACAGACGATGATAAATCTCAGCAAGAATATCA
ACAAGCTGAGCAAAGCCGGTGATAGTTATTTGCATTTAGCAGCTGACGCC
AACCAGCTACGTGCTGTACAGCTGCTGTTGAGCAAAATGAGCAAGGACAC
TGTGTTCGCGGCCAATGAGTCCGGCTACACCAGTCTGCATTATGCCGCAA
TATCCGAAAATACCTCGATAATTCAGCAGATCCTAGCCACCGGTATCGAT
GTAAACGCCAAGGACCGGCATGGACGGACGGCTTTACACTACATGGACAA
CAAGCACAATGAGTCATGTGTTGCGGTACTGATCGAAGCCGGGGCAGATG
TGAATATATTGGACAATGAAGGGAGACCACCAATCCATCATGCGTCGATA
TGGGGGAAAGACGGGATGATGGAGCTTTATGTGAAAGGGGGAGCTTCTGA
GCACGAAGGCTGCGATTCTTGCAACAGAAACATCAAATCAACCAGGGAGT
GGCTAAAGGAAGTTGGCTGTTTAATTTGA back to topCoding sequence (CDS) from alignment at An11:469010..470938- >CBS51388_006660-T1 ID=CBS51388_006660-T1|Name=CBS51388_006660-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1929bp|location=Sequence derived from alignment at An11:469010..470938- (Aspergillus niger CBS 513.88)
ATGGATTTTCCCACTAGTCTCGACTTTTTCCCTGCAGAGCTTGTCATCTG
GATAGGTGAATTCTTGGACCGGAAGACATTGGCCGCCTTTATCCGTACAT
CGAAGCGATATGCCCAGCTCTTGACACCCCAGCTTTTAACTCTGTGGCTC
TCGTGCAAAACTGGCAAGTATTGCTTCAGGCGTAATTGGCCTGAAACACA
GAATTGGAAGTCATCTCATATAGTCGATTTTTTCCAGAACTTCCCGTCTG
ATGTATCTCAGATCTACTGTTGCTCTACATTGCTGTTTCGGTTTGCCGAT
GGAGGTAACCTAGAGCTCGTGAAGCTCATGTTATCTAGGGGCGCAGATCT
CGAGGCAAAAGGCGCGAATGGGGAGACTCCTCTGCATATTGCTACCAGTG
GAGGACATATTCAGGTCGTGCAGGCATTGCTGGAAGCCGGGGCAGATGCC
AGTGCCAAAGACAGGTATGGAGATACACTACTGCAGAGAGCGGCATCCAT
GGGGAAGCCGGCCATGATCCGATACCTGATTAGCTCAGGACAATACACGC
TGGAAGCCCTACTGGAAGCGTTTGAACGGGGTATGAAGTGCTTCTTCCCA
AAAGTCTGTGCAGAAGTCTGTGCAGAAGTCTGGCCCGCTCTCGAAAATGC
CGGCTATAAGTTCAACGCGACTGGCACTGACGGTCAAATATACCTTCACT
TCGCCGCTAAGAGAGGACTTAGCTTTCTTGTGCAGTTCTTTCTTGATAGG
GGCCATGACCCCTTTCGCTTGGATGAAAAGGGAAATACAGCCTTGAGCAT
CGCCTGCTCAGAAGTTTTTTCTCGCTCGGAGGATATGTTAGAAACTCCGA
AGCTACTCATTAACGCAATGCAAGCCGCTGGCGGTGACCCTTTCAAAGCA
AACCGAGAGGGTGTTACTCCACTGCACAAAGCCATTCAGAAATCGCAGGT
TGATCTAGTCAGATTATTTCTCGATTCCGGAGCAAGTGTGACTGCTCGGG
GTAAGAATGGGATTAAATGCATGGAAAGAGCACTACGAGGTCCTAGAGAT
ATGTTTGAGCTGCTCGTTGACCGTGAACCCGCCTTATGGCCCACCCACAT
GCTACAATCAAGCCTTCATGGTTATACAGTCGAGTTGAAAAAAGGACAAG
GTTACCAGGATACTCCGAAGGCTATAGCAAGGATCCTGAAACTCGCCAAA
TCTGGCAAGGCAGCAATCAATGTCTCCACCAGGGACAGCTCGGGATCTAC
TCCGCTTCATAATACATGTCTGGCTAGGCACAACTCTGCTGAGGTTCCTG
GGCTCATTCGCTCTTTCATCGAAGCAGGGGCAGATATAGACATGCCAGAT
GACGAAGGCCGAACACCTCTCCACAATATACTCAGGGTATCTACTCCAAA
ATCTGAGCGGGAGATCATACAGACGATGATAAATCTCAGCAAGAATATCA
ACAAGCTGAGCAAAGCCGGTGATAGTTATTTGCATTTAGCAGCTGACGCC
AACCAGCTACGTGCTGTACAGCTGCTGTTGAGCAAAATGAGCAAGGACAC
TGTGTTCGCGGCCAATGAGTCCGGCTACACCAGTCTGCATTATGCCGCAA
TATCCGAAAATACCTCGATAATTCAGCAGATCCTAGCCACCGGTATCGAT
GTAAACGCCAAGGACCGGCATGGACGGACGGCTTTACACTACATGGACAA
CAAGCACAATGAGTCATGTGTTGCGGTACTGATCGAAGCCGGGGCAGATG
TGAATATATTGGACAATGAAGGGAGACCACCAATCCATCATGCGTCGATA
TGGGGGAAAGACGGGATGATGGAGCTTTATGTGAAAGGGGGAGCTTCTGA
GCACGAAGGCTGCGATTCTTGCAACAGAAACATCAAATCAACCAGGGAGT
GGCTAAAGGAAGTTGGCTGTTTAATTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:469010..470938 - |
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