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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:518939..520253+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006675-T1 ID=CBS51388_006675-T1|Name=CBS51388_006675-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1315bp|location=Sequence derived from alignment at An11:518939..520253+ (Aspergillus niger CBS 513.88)
ATGTTTCTATTCACATCACAGAAACGGTTCGGCCGGTTGATTCTCTATGC
GCTGGGGGTGCTCGGGATCATCCTCATCCTTTGGCAGTTGCCCTATGCCC
GGCCCACCGTGCGGATAGGAGCTAGACGCGCCCGGTCACAGTTCGAGGCG
ATCAGGAACGAAACTTTGGGGGTATTTCCTTCCAATGATGTTGATATTAG
CCCCCACCCTAATTATGTATAGGTCCAGAAAATATTCGCGATCAATTTGC
CTAGCAGGGTTGACAAGCGCGACAATCTTGTCCTCGGTTCTTCAGTCAGT
GGGTTTAACATCGACTGGGTAAACGGTATCACTCCCGACGAGGTTGACCC
CAGGACATACCCTTATGTGAGTCCATAAGTTAGATCCGATGGAATGCCTG
CCACTGACAATTCAGAACTGGAACTATGACCATAAACCTACCGAGTATGG
TGCTCGACGGGCTCATGTGAACGCCATGCAACGGTATGCGACAGTCTGCC
CCCCTTTCCGTACATCTGGCTAACGTTGCATTCCCAGAATTGTTCATGAA
AGGATAGGAAGTGCCATGATCATGGAGGATGATGTCGACTGGGACGTCAA
TCTCAAAACCCAGCTACAGAGCTTTGCTCTCGGTGTACGGGCTCTCCAAG
GGGCGGATAAGAAGGTGACGGCTTCGCCCTACGGTGATGACTGGGACATC
ATCTGGCTTGGTCACTGTGGCATGGAATGTCGAACTAATGAGCCGTATTT
CGTGAGCTCAAATGATACAACCGTCCTTCCACCACATCACTTTCTGCCCT
ACTGGCGCGATCCGCCTCCGTTCGGGATACCAGATTACACCCGTCTGACC
TGCGCCGTCAACGATGCTGTTTGCTCCATAGTCTATGCAGTGAGCTATCA
TGGTGCTCAGAAGATCTTGTCTGCTCTTTCTGTGAACCCAACAGGCCTCG
CAGACAAAATCGACATTGGCGCCCAGTTCGACGTATCGCTCGGTCGCATG
TGCGGTAATGGCTATCTCCGGTGCTTTGCGGTCTACCCATCCTTAACAGG
TGGATATCATCCTGCTGGGCCCTCCTCGAAGGAATCTGATATTCATGGCG
GGAATGAGGATGTCCATCCTGTCTCCAGTCACGGGGTTATGTACAGTACG
ATGCTGAACATCAACCGCATACTAAACGGTGAGGATACGGTTGTTTCCAA
TTGGGATGACGCCCCTGCTCCAGTGATTAACCCGGCGAACGTCTCAGTGG
TTGGGGGAACGATGCATATGCTGCAAGAGAACGACATGTATACTCTTTCG
GTTGTCAACCCATAA back to topCoding sequence (CDS) from alignment at An11:518939..520253+ >CBS51388_006675-T1 ID=CBS51388_006675-T1|Name=CBS51388_006675-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4644bp|location=Sequence derived from alignment at An11:518939..520253+ (Aspergillus niger CBS 513.88)
ATGTTTCTATTCACATCACAGAAACGGTTCGGCCGGTTGATTCTCTATGC
GCTGGGGGTGCTCGGGATCATCCTCATCCTTTGGCAGTTGCCCTATGCCC
GGCCCACCGTGCGGATAGGAGCTAGACGCGCCCGGTCACAGTTCGAGGCG
ATCAGGAACGAAACTTTGGGGGTCCAGAAAATATTCGCGATCAATTTGCC
TAGCAGGGTTGACAAGCGCGACAATCTTGTCCTCGGTTCTTCAGTCAGTG
GGTTTAACATCGACTGGGTAAACGGTATCACTCCCGACGAGGTTGACCCC
AGGACATACCCTTATAACTGGAACTATGACCATAAACCTACCGAGTATGG
TGCTCGACGGGCTCATGTGAACGCCATGCAACGAATTGTTCATGAAAGGA
TAGGAAGTGCCATGATCATGGAGGATGATGTCGACTGGGACGTCAATCTC
AAAACCCAGCTACAGAGCTTTGCTCTCGGTGTACGGGCTCTCCAAGGGGC
GGATAAGAAGGTGACGGCTTCGCCCTACGGTGATGACTGGGACATCATCT
GGCTTGGTCACTGTGGCATGGAATGTCGAACTAATGAGCCGTATTTCGTG
AGCTCAAATGATACAACCGTCCTTCCACCACATCACTTTCTGCCCTACTG
GCGCGATCCGCCTCCGTTCGGGATACCAGATTACACCCGTCTGACCTGCG
CCGTCAACGATGCTGTTTGCTCCATAGTCTATGCAGTGAGCTATCATGGT
GCTCAGAAGATCTTGTCTGCTCTTTCTGTGAACCCAACAGGCCTCGCAGA
CAAAATCGACATTGGCGCCCAGTTCGACGTATCGCTCGGTCGCATGTGCG
GTAATGGCTATCTCCGGTGCTTTGCGGTCTACCCATCCTTAACAGGTGGA
TATCATCCTGCTGGGCCCTCCTCGAAGGAATCTGATATTCATGGCGGGAA
TGAGGATGTCCATCCTGTCTCCAGTCACGGGGTTATGTACAGTACGATGC
TGAACATCAACCGCATACTAAACGGTGAGGATACGGTTGTTTCCAATTGG
GATGACGCCCCTGCTCCAGTGATTAACCCGGCGAACGTCTCAGTGGTTGG
GGGAACGATGCATATGCTGCAAGAGAACGACATGTATACTCTTTCGGTTG
TCAACCCATAAATGTTTCTATTCACATCACAGAAACGGTTCGGCCGGTTG
ATTCTCTATGCGCTGGGGGTGCTCGGGATCATCCTCATCCTTTGGCAGTT
GCCCTATGCCCGGCCCACCGTGCGGATAGGAGCTAGACGCGCCCGGTCAC
AGTTCGAGGCGATCAGGAACGAAACTTTGGGGGTCCAGAAAATATTCGCG
ATCAATTTGCCTAGCAGGGTTGACAAGCGCGACAATCTTGTCCTCGGTTC
TTCAGTCAGTGGGTTTAACATCGACTGGGTAAACGGTATCACTCCCGACG
AGGTTGACCCCAGGACATACCCTTATAACTGGAACTATGACCATAAACCT
ACCGAGTATGGTGCTCGACGGGCTCATGTGAACGCCATGCAACGAATTGT
TCATGAAAGGATAGGAAGTGCCATGATCATGGAGGATGATGTCGACTGGG
ACGTCAATCTCAAAACCCAGCTACAGAGCTTTGCTCTCGGTGTACGGGCT
CTCCAAGGGGCGGATAAGAAGGTGACGGCTTCGCCCTACGGTGATGACTG
GGACATCATCTGGCTTGGTCACTGTGGCATGGAATGTCGAACTAATGAGC
CGTATTTCGTGAGCTCAAATGATACAACCGTCCTTCCACCACATCACTTT
CTGCCCTACTGGCGCGATCCGCCTCCGTTCGGGATACCAGATTACACCCG
TCTGACCTGCGCCGTCAACGATGCTGTTTGCTCCATAGTCTATGCAGTGA
GCTATCATGGTGCTCAGAAGATCTTGTCTGCTCTTTCTGTGAACCCAACA
GGCCTCGCAGACAAAATCGACATTGGCGCCCAGTTCGACGTATCGCTCGG
TCGCATGTGCGGTAATGGCTATCTCCGGTGCTTTGCGGTCTACCCATCCT
TAACAGGTGGATATCATCCTGCTGGGCCCTCCTCGAAGGAATCTGATATT
CATGGCGGGAATGAGGATGTCCATCCTGTCTCCAGTCACGGGGTTATGTA
CAGTACGATGCTGAACATCAACCGCATACTAAACGGTGAGGATACGGTTG
TTTCCAATTGGGATGACGCCCCTGCTCCAGTGATTAACCCGGCGAACGTC
TCAGTGGTTGGGGGAACGATGCATATGCTGCAAGAGAACGACATGTATAC
TCTTTCGGTTGTCAACCCATAAATGTTTCTATTCACATCACAGAAACGGT
TCGGCCGGTTGATTCTCTATGCGCTGGGGGTGCTCGGGATCATCCTCATC
CTTTGGCAGTTGCCCTATGCCCGGCCCACCGTGCGGATAGGAGCTAGACG
CGCCCGGTCACAGTTCGAGGCGATCAGGAACGAAACTTTGGGGGTCCAGA
AAATATTCGCGATCAATTTGCCTAGCAGGGTTGACAAGCGCGACAATCTT
GTCCTCGGTTCTTCAGTCAGTGGGTTTAACATCGACTGGGTAAACGGTAT
CACTCCCGACGAGGTTGACCCCAGGACATACCCTTATAACTGGAACTATG
ACCATAAACCTACCGAGTATGGTGCTCGACGGGCTCATGTGAACGCCATG
CAACGAATTGTTCATGAAAGGATAGGAAGTGCCATGATCATGGAGGATGA
TGTCGACTGGGACGTCAATCTCAAAACCCAGCTACAGAGCTTTGCTCTCG
GTGTACGGGCTCTCCAAGGGGCGGATAAGAAGGTGACGGCTTCGCCCTAC
GGTGATGACTGGGACATCATCTGGCTTGGTCACTGTGGCATGGAATGTCG
AACTAATGAGCCGTATTTCGTGAGCTCAAATGATACAACCGTCCTTCCAC
CACATCACTTTCTGCCCTACTGGCGCGATCCGCCTCCGTTCGGGATACCA
GATTACACCCGTCTGACCTGCGCCGTCAACGATGCTGTTTGCTCCATAGT
CTATGCAGTGAGCTATCATGGTGCTCAGAAGATCTTGTCTGCTCTTTCTG
TGAACCCAACAGGCCTCGCAGACAAAATCGACATTGGCGCCCAGTTCGAC
GTATCGCTCGGTCGCATGTGCGGTAATGGCTATCTCCGGTGCTTTGCGGT
CTACCCATCCTTAACAGGTGGATATCATCCTGCTGGGCCCTCCTCGAAGG
AATCTGATATTCATGGCGGGAATGAGGATGTCCATCCTGTCTCCAGTCAC
GGGGTTATGTACAGTACGATGCTGAACATCAACCGCATACTAAACGGTGA
GGATACGGTTGTTTCCAATTGGGATGACGCCCCTGCTCCAGTGATTAACC
CGGCGAACGTCTCAGTGGTTGGGGGAACGATGCATATGCTGCAAGAGAAC
GACATGTATACTCTTTCGGTTGTCAACCCATAAATGTTTCTATTCACATC
ACAGAAACGGTTCGGCCGGTTGATTCTCTATGCGCTGGGGGTGCTCGGGA
TCATCCTCATCCTTTGGCAGTTGCCCTATGCCCGGCCCACCGTGCGGATA
GGAGCTAGACGCGCCCGGTCACAGTTCGAGGCGATCAGGAACGAAACTTT
GGGGGTCCAGAAAATATTCGCGATCAATTTGCCTAGCAGGGTTGACAAGC
GCGACAATCTTGTCCTCGGTTCTTCAGTCAGTGGGTTTAACATCGACTGG
GTAAACGGTATCACTCCCGACGAGGTTGACCCCAGGACATACCCTTATAA
CTGGAACTATGACCATAAACCTACCGAGTATGGTGCTCGACGGGCTCATG
TGAACGCCATGCAACGAATTGTTCATGAAAGGATAGGAAGTGCCATGATC
ATGGAGGATGATGTCGACTGGGACGTCAATCTCAAAACCCAGCTACAGAG
CTTTGCTCTCGGTGTACGGGCTCTCCAAGGGGCGGATAAGAAGGTGACGG
CTTCGCCCTACGGTGATGACTGGGACATCATCTGGCTTGGTCACTGTGGC
ATGGAATGTCGAACTAATGAGCCGTATTTCGTGAGCTCAAATGATACAAC
CGTCCTTCCACCACATCACTTTCTGCCCTACTGGCGCGATCCGCCTCCGT
TCGGGATACCAGATTACACCCGTCTGACCTGCGCCGTCAACGATGCTGTT
TGCTCCATAGTCTATGCAGTGAGCTATCATGGTGCTCAGAAGATCTTGTC
TGCTCTTTCTGTGAACCCAACAGGCCTCGCAGACAAAATCGACATTGGCG
CCCAGTTCGACGTATCGCTCGGTCGCATGTGCGGTAATGGCTATCTCCGG
TGCTTTGCGGTCTACCCATCCTTAACAGGTGGATATCATCCTGCTGGGCC
CTCCTCGAAGGAATCTGATATTCATGGCGGGAATGAGGATGTCCATCCTG
TCTCCAGTCACGGGGTTATGTACAGTACGATGCTGAACATCAACCGCATA
CTAAACGGTGAGGATACGGTTGTTTCCAATTGGGATGACGCCCCTGCTCC
AGTGATTAACCCGGCGAACGTCTCAGTGGTTGGGGGAACGATGCATATGC
TGCAAGAGAACGACATGTATACTCTTTCGGTTGTCAACCCATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT25 |
| DBxref | InterPro:IPR002654 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:518939..520253 + |
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