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CBS51388_006709-T1, CBS51388_006709-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006709-T1
Unique NameCBS51388_006709-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:617422..618361-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006709-T1 ID=CBS51388_006709-T1|Name=CBS51388_006709-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=940bp|location=Sequence derived from alignment at An11:617422..618361- (Aspergillus niger CBS 513.88)
ATGTCATCCCCAACCATCTACCTCATCACCGGGGCCAGCAGAGGTACACA
CCACTTTTCTTATTCTCATCCCCATACCACACCACCCTCTTCGTCCAGCT
TACCCACAAAATAATCCAGGGATTGGCCTCGCCCTCACCCAAACTCTCCT
GCTCCTCCCAAACACCACTGTGATCGCTACCATGCGCAACCCCACCACGA
ACTCTCTCTATACTAACCCCCCACCAACATCCCCCACCTCAACCCTCATC
CTCCTTCCCCTCGACATCCAATCCACCACCTCAATTACTACAGCCATCGA
AACCCTCAAATCGAAACACAACATCACGCACATCGACACCGTGATTTCCA
ACGCAGGGTACTACAACGACGCCACCCACCGCGTCGACAACATCCCTCTC
TCTACTGTGCAATCGCACTTGGACGTGAACACGCTTGGCACAATCCGCCT
CTTCCAGGGTGTGTATGACATGCTGAAGAAGAGCACGAAGCCGATGTTTG
TCAGTGTTAGTAGCTTCCTGGGGAGTATCGGCGGTCTCGAGGAGGAATTC
TTTCCCGGGGCTGCATACGGGGTTAGTAAGGCTGCCAGTAACTGGGTGAC
GAGGAAAATGCATGTTGAGAATGAGGAGATGGTTTGTTTCATGGTTCATC
CGGGGTGAGCTTACTATCTTGTGCTTAGGAGGTTGGGGTACTGATATGAA
ATGCGTAGGTTCGTCAAGACTGAGATGGGGAATGCGTGTGCGAAGAGTAT
TGGGTTGGAAGAGGCGTTTGCGGAGCCGAAGGAGTGTGCGGAGGCTTTGG
TGAAGTTGGTAAGTCTATATTCTTATTTGTACTTCTTATATATTGGGGTG
TGATACTGAGTAGACTAGATTGCAAGCGCCACGAGGGAAACAGTCGGAGG
TCGGTTCATCAGTTGGAGAGGGGAAGAGGTTCCTTTCTAA
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Coding sequence (CDS) from alignment at An11:617422..618361-

>CBS51388_006709-T1 ID=CBS51388_006709-T1|Name=CBS51388_006709-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3000bp|location=Sequence derived from alignment at An11:617422..618361- (Aspergillus niger CBS 513.88)
ATTGCAAGCGCCACGAGGGAAACAGTCGGAGGTCGGTTCATCAGTTGGAG
AGGGGAAGAGGTTCCTTTCTAAGTTCGTCAAGACTGAGATGGGGAATGCG
TGTGCGAAGAGTATTGGGTTGGAAGAGGCGTTTGCGGAGCCGAAGGAGTG
TGCGGAGGCTTTGGTGAAGTTGGGATTGGCCTCGCCCTCACCCAAACTCT
CCTGCTCCTCCCAAACACCACTGTGATCGCTACCATGCGCAACCCCACCA
CGAACTCTCTCTATACTAACCCCCCACCAACATCCCCCACCTCAACCCTC
ATCCTCCTTCCCCTCGACATCCAATCCACCACCTCAATTACTACAGCCAT
CGAAACCCTCAAATCGAAACACAACATCACGCACATCGACACCGTGATTT
CCAACGCAGGGTACTACAACGACGCCACCCACCGCGTCGACAACATCCCT
CTCTCTACTGTGCAATCGCACTTGGACGTGAACACGCTTGGCACAATCCG
CCTCTTCCAGGGTGTGTATGACATGCTGAAGAAGAGCACGAAGCCGATGT
TTGTCAGTGTTAGTAGCTTCCTGGGGAGTATCGGCGGTCTCGAGGAGGAA
TTCTTTCCCGGGGCTGCATACGGGGTTAGTAAGGCTGCCAGTAACTGGGT
GACGAGGAAAATGCATGTTGAGAATGAGGAGATGGTTTGTTTCATGGTTC
ATCCGGGATGTCATCCCCAACCATCTACCTCATCACCGGGGCCAGCAGAG
ATTGCAAGCGCCACGAGGGAAACAGTCGGAGGTCGGTTCATCAGTTGGAG
AGGGGAAGAGGTTCCTTTCTAAGTTCGTCAAGACTGAGATGGGGAATGCG
TGTGCGAAGAGTATTGGGTTGGAAGAGGCGTTTGCGGAGCCGAAGGAGTG
TGCGGAGGCTTTGGTGAAGTTGGGATTGGCCTCGCCCTCACCCAAACTCT
CCTGCTCCTCCCAAACACCACTGTGATCGCTACCATGCGCAACCCCACCA
CGAACTCTCTCTATACTAACCCCCCACCAACATCCCCCACCTCAACCCTC
ATCCTCCTTCCCCTCGACATCCAATCCACCACCTCAATTACTACAGCCAT
CGAAACCCTCAAATCGAAACACAACATCACGCACATCGACACCGTGATTT
CCAACGCAGGGTACTACAACGACGCCACCCACCGCGTCGACAACATCCCT
CTCTCTACTGTGCAATCGCACTTGGACGTGAACACGCTTGGCACAATCCG
CCTCTTCCAGGGTGTGTATGACATGCTGAAGAAGAGCACGAAGCCGATGT
TTGTCAGTGTTAGTAGCTTCCTGGGGAGTATCGGCGGTCTCGAGGAGGAA
TTCTTTCCCGGGGCTGCATACGGGGTTAGTAAGGCTGCCAGTAACTGGGT
GACGAGGAAAATGCATGTTGAGAATGAGGAGATGGTTTGTTTCATGGTTC
ATCCGGGATGTCATCCCCAACCATCTACCTCATCACCGGGGCCAGCAGAG
ATTGCAAGCGCCACGAGGGAAACAGTCGGAGGTCGGTTCATCAGTTGGAG
AGGGGAAGAGGTTCCTTTCTAAGTTCGTCAAGACTGAGATGGGGAATGCG
TGTGCGAAGAGTATTGGGTTGGAAGAGGCGTTTGCGGAGCCGAAGGAGTG
TGCGGAGGCTTTGGTGAAGTTGGGATTGGCCTCGCCCTCACCCAAACTCT
CCTGCTCCTCCCAAACACCACTGTGATCGCTACCATGCGCAACCCCACCA
CGAACTCTCTCTATACTAACCCCCCACCAACATCCCCCACCTCAACCCTC
ATCCTCCTTCCCCTCGACATCCAATCCACCACCTCAATTACTACAGCCAT
CGAAACCCTCAAATCGAAACACAACATCACGCACATCGACACCGTGATTT
CCAACGCAGGGTACTACAACGACGCCACCCACCGCGTCGACAACATCCCT
CTCTCTACTGTGCAATCGCACTTGGACGTGAACACGCTTGGCACAATCCG
CCTCTTCCAGGGTGTGTATGACATGCTGAAGAAGAGCACGAAGCCGATGT
TTGTCAGTGTTAGTAGCTTCCTGGGGAGTATCGGCGGTCTCGAGGAGGAA
TTCTTTCCCGGGGCTGCATACGGGGTTAGTAAGGCTGCCAGTAACTGGGT
GACGAGGAAAATGCATGTTGAGAATGAGGAGATGGTTTGTTTCATGGTTC
ATCCGGGATGTCATCCCCAACCATCTACCTCATCACCGGGGCCAGCAGAG
ATTGCAAGCGCCACGAGGGAAACAGTCGGAGGTCGGTTCATCAGTTGGAG
AGGGGAAGAGGTTCCTTTCTAAGTTCGTCAAGACTGAGATGGGGAATGCG
TGTGCGAAGAGTATTGGGTTGGAAGAGGCGTTTGCGGAGCCGAAGGAGTG
TGCGGAGGCTTTGGTGAAGTTGGGATTGGCCTCGCCCTCACCCAAACTCT
CCTGCTCCTCCCAAACACCACTGTGATCGCTACCATGCGCAACCCCACCA
CGAACTCTCTCTATACTAACCCCCCACCAACATCCCCCACCTCAACCCTC
ATCCTCCTTCCCCTCGACATCCAATCCACCACCTCAATTACTACAGCCAT
CGAAACCCTCAAATCGAAACACAACATCACGCACATCGACACCGTGATTT
CCAACGCAGGGTACTACAACGACGCCACCCACCGCGTCGACAACATCCCT
CTCTCTACTGTGCAATCGCACTTGGACGTGAACACGCTTGGCACAATCCG
CCTCTTCCAGGGTGTGTATGACATGCTGAAGAAGAGCACGAAGCCGATGT
TTGTCAGTGTTAGTAGCTTCCTGGGGAGTATCGGCGGTCTCGAGGAGGAA
TTCTTTCCCGGGGCTGCATACGGGGTTAGTAAGGCTGCCAGTAACTGGGT
GACGAGGAAAATGCATGTTGAGAATGAGGAGATGGTTTGTTTCATGGTTC
ATCCGGGATGTCATCCCCAACCATCTACCTCATCACCGGGGCCAGCAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006709CBS51388_006709Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006709-T1CBS51388_006709-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006709-T1.cdsCBS51388_006709-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006709-T1.exon4CBS51388_006709-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_006709-T1.exon3CBS51388_006709-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006709-T1.exon2CBS51388_006709-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006709-T1.exon1CBS51388_006709-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteantiSMASH:Cluster_11.4
NoteSMCOG1001:short-chain dehydrogenase/reductase SDR
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:617422..618361 -
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