You are here

Home

CBS51388_006714-T1, CBS51388_006714-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006714-T1
Unique NameCBS51388_006714-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:632627..634326+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006714-T1 ID=CBS51388_006714-T1|Name=CBS51388_006714-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1700bp|location=Sequence derived from alignment at An11:632627..634326+ (Aspergillus niger CBS 513.88)
ATGCCCAAACGCTCCCGCCCACCACCACCAACAGCCACCCCCGGACCAAG
CGGAAGAAACAGAAACAGAGACAGAGACACCACCCCCCCTCTTCCCCCCT
ACCAACCCCCCACCAGCACCCTGACGACCCTATCCCACCAACCGACCACC
GCACCCGCCCTCTCCGCCCTCCTCGCAACGCACACCTCCTCCACCCTAAA
AACGCACCTCCAGCACGCGCAAGAGAAACTCACCGACGCCGCAGGCGAGA
TCAACGAGCGGCTCACAGACGCGAAAGAGAGGAGTAAGAAATCGCGGGAG
AGGAGGAGGAATATACGTTCTCATACTTTGGAGAATAATAATAATAATGG
TGAGGGGGTAGATGAGGAAGGGGGGGATAGTGAGGACGAGGGGATTGAAG
AGTTCGAGGAGAGAGTGGCTCAGACGACGAAGGTATTGGAGGAGACTATT
CGGGGGGTTATTGATGCGGAAGTGAGGGGGGAGGAGCTTGGGAGGGTTAT
CTCGGGATTGGAGGGCGGGGTTGCTGAACGGGTGAGGGTTAGGGGTGTGA
GGAGGAGTCAGAGAGGAATTGGGAGAAGGTTGAGGGGGCATCATGGTGAG
GATGAGGAGGATGAGGATGGGGAGGAAGGGGTGGATGTGGATGTCGATGA
AGATGAGGAGGGCGCGGTGCCGTTCCTGGCGCAGTTCGAGGATGAGCTGC
GCGGGAAGATGGAGGAGTAGGAAGGGTTGAGTTTGACGAGACGGTATGTA
TATCCCCATTTCTATCCCAATAATATTTTACTTCCAGGTTTATTTACTAA
CGGAATCATGGTGGTAGGTATTCTACGAACAACTCCTACATAGGTTTCTA
CAAAATCATCCACGAAGCCAAACACATCGGCGACGAAATCCCCCCTCCGC
CTCATCCGTCGACGTGGTTCGCTCACTTGGAAGATCCTCATTCTCAATCT
CAACCACAATCTCATCCATCTGCCTCTACCTCTACTTCAACCACTACCAC
CAGACAAACTAGACCCACCCGCGCTCGACCTCAACCCCCCTCCGAAGAAG
AAGATGAAGATGATGATGACGAAATCGCCATCCAAACTGAACGCATATCG
CTGAAATGCCCCCTCACACTCCTTCCCTTCCGCGACCCCGTGACCAGCAC
GAAATGCCCACACAGTTTCGAGCGCGAGGCGATATTCACCATGATTAGCG
GGAGTAATCAGATGGTGCCTGATCCGAGGGGGTCATCTGGAACTGGAAGA
GCGAAGCGCGTGCGCAGCGTCAAGTGTCCTGTGTGCGAGGTGCAGTTGAC
GGAGTTTGATCTGCGGAGTGATCCTGTGCTGATGAGGCGGGTGAAGAGGG
CGGAGATGGCGGAGTTGAGGAGGAGGGAGAGGGAGATGTTGGATGATGGG
GAAGATGATCAGGATGGTGGTGACGGGGGTGGTGGTGGGGGGAAGAGGAA
GAGGAGTGGGAGGAGGAGGGGGAGTGCGGTTGAGGTTGATGATGGTGATA
GTGATGATGATAGTGGTGAGGATGATGGGGTGGAGAGGATTCGGGTTAAG
AGGGAGAGAGGGATGTCTGTTGCTGCTAGGATTAAGCAGGAGAGGGCGGT
GTCGATGGTTGGGGATGGGGATGGGGATGTGGAGGAGGTTGATATGGATG
AAGAAGGGGGAGGGGAAGAGGGTGGGTATGATTCTATGTATGATGAGTGA
back to top

Coding sequence (CDS) from alignment at An11:632627..634326+

>CBS51388_006714-T1 ID=CBS51388_006714-T1|Name=CBS51388_006714-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3198bp|location=Sequence derived from alignment at An11:632627..634326+ (Aspergillus niger CBS 513.88)
ATGCCCAAACGCTCCCGCCCACCACCACCAACAGCCACCCCCGGACCAAG
CGGAAGAAACAGAAACAGAGACAGAGACACCACCCCCCCTCTTCCCCCCT
ACCAACCCCCCACCAGCACCCTGACGACCCTATCCCACCAACCGACCACC
GCACCCGCCCTCTCCGCCCTCCTCGCAACGCACACCTCCTCCACCCTAAA
AACGCACCTCCAGCACGCGCAAGAGAAACTCACCGACGCCGCAGGCGAGA
TCAACGAGCGGCTCACAGACGCGAAAGAGAGGAGTAAGAAATCGCGGGAG
AGGAGGAGGAATATACGTTCTCATACTTTGGAGAATAATAATAATAATGG
TGAGGGGGTAGATGAGGAAGGGGGGGATAGTGAGGACGAGGGGATTGAAG
AGTTCGAGGAGAGAGTGGCTCAGACGACGAAGGTATTGGAGGAGACTATT
CGGGGGGTTATTGATGCGGAAGTGAGGGGGGAGGAGCTTGGGAGGGTTAT
CTCGGGATTGGAGGGCGGGGTTGCTGAACGGGTGAGGGTTAGGGGTGTGA
GGAGGAGTCAGAGAGGAATTGGGAGAAGGTTGAGGGGGCATCATGGTGAG
GATGAGGAGGATGAGGATGGGGAGGAAGGGGTGGATGTGGATGTCGATGA
AGATGAGGAGGGCGCGGTGCCGTTCCTGGCGCAGTTCGAGGATGAGCTGC
GCGGGAAGATGGAGGAGTATTCTACGAACAACTCCTACATAGGTTTCTAC
AAAATCATCCACGAAGCCAAACACATCGGCGACGAAATCCCCCCTCCGCC
TCATCCGTCGACGTGGTTCGCTCACTTGGAAGATCCTCATTCTCAATCTC
AACCACAATCTCATCCATCTGCCTCTACCTCTACTTCAACCACTACCACC
AGACAAACTAGACCCACCCGCGCTCGACCTCAACCCCCCTCCGAAGAAGA
AGATGAAGATGATGATGACGAAATCGCCATCCAAACTGAACGCATATCGC
TGAAATGCCCCCTCACACTCCTTCCCTTCCGCGACCCCGTGACCAGCACG
AAATGCCCACACAGTTTCGAGCGCGAGGCGATATTCACCATGATTAGCGG
GAGTAATCAGATGGTGCCTGATCCGAGGGGGTCATCTGGAACTGGAAGAG
CGAAGCGCGTGCGCAGCGTCAAGTGTCCTGTGTGCGAGGTGCAGTTGACG
GAGTTTGATCTGCGGAGTGATCCTGTGCTGATGAGGCGGGTGAAGAGGGC
GGAGATGGCGGAGTTGAGGAGGAGGGAGAGGGAGATGTTGGATGATGGGG
AAGATGATCAGGATGGTGGTGACGGGGGTGGTGGTGGGGGGAAGAGGAAG
AGGAGTGGGAGGAGGAGGGGGAGTGCGGTTGAGGTTGATGATGGTGATAG
TGATGATGATAGTGGTGAGGATGATGGGGTGGAGAGGATTCGGGTTAAGA
GGGAGAGAGGGATGTCTGTTGCTGCTAGGATTAAGCAGGAGAGGGCGGTG
TCGATGGTTGGGGATGGGGATGGGGATGTGGAGGAGGTTGATATGGATGA
AGAAGGGGGAGGGGAAGAGGGTGGGTATGATTCTATGTATGATGAGTGAA
TGCCCAAACGCTCCCGCCCACCACCACCAACAGCCACCCCCGGACCAAGC
GGAAGAAACAGAAACAGAGACAGAGACACCACCCCCCCTCTTCCCCCCTA
CCAACCCCCCACCAGCACCCTGACGACCCTATCCCACCAACCGACCACCG
CACCCGCCCTCTCCGCCCTCCTCGCAACGCACACCTCCTCCACCCTAAAA
ACGCACCTCCAGCACGCGCAAGAGAAACTCACCGACGCCGCAGGCGAGAT
CAACGAGCGGCTCACAGACGCGAAAGAGAGGAGTAAGAAATCGCGGGAGA
GGAGGAGGAATATACGTTCTCATACTTTGGAGAATAATAATAATAATGGT
GAGGGGGTAGATGAGGAAGGGGGGGATAGTGAGGACGAGGGGATTGAAGA
GTTCGAGGAGAGAGTGGCTCAGACGACGAAGGTATTGGAGGAGACTATTC
GGGGGGTTATTGATGCGGAAGTGAGGGGGGAGGAGCTTGGGAGGGTTATC
TCGGGATTGGAGGGCGGGGTTGCTGAACGGGTGAGGGTTAGGGGTGTGAG
GAGGAGTCAGAGAGGAATTGGGAGAAGGTTGAGGGGGCATCATGGTGAGG
ATGAGGAGGATGAGGATGGGGAGGAAGGGGTGGATGTGGATGTCGATGAA
GATGAGGAGGGCGCGGTGCCGTTCCTGGCGCAGTTCGAGGATGAGCTGCG
CGGGAAGATGGAGGAGTATTCTACGAACAACTCCTACATAGGTTTCTACA
AAATCATCCACGAAGCCAAACACATCGGCGACGAAATCCCCCCTCCGCCT
CATCCGTCGACGTGGTTCGCTCACTTGGAAGATCCTCATTCTCAATCTCA
ACCACAATCTCATCCATCTGCCTCTACCTCTACTTCAACCACTACCACCA
GACAAACTAGACCCACCCGCGCTCGACCTCAACCCCCCTCCGAAGAAGAA
GATGAAGATGATGATGACGAAATCGCCATCCAAACTGAACGCATATCGCT
GAAATGCCCCCTCACACTCCTTCCCTTCCGCGACCCCGTGACCAGCACGA
AATGCCCACACAGTTTCGAGCGCGAGGCGATATTCACCATGATTAGCGGG
AGTAATCAGATGGTGCCTGATCCGAGGGGGTCATCTGGAACTGGAAGAGC
GAAGCGCGTGCGCAGCGTCAAGTGTCCTGTGTGCGAGGTGCAGTTGACGG
AGTTTGATCTGCGGAGTGATCCTGTGCTGATGAGGCGGGTGAAGAGGGCG
GAGATGGCGGAGTTGAGGAGGAGGGAGAGGGAGATGTTGGATGATGGGGA
AGATGATCAGGATGGTGGTGACGGGGGTGGTGGTGGGGGGAAGAGGAAGA
GGAGTGGGAGGAGGAGGGGGAGTGCGGTTGAGGTTGATGATGGTGATAGT
GATGATGATAGTGGTGAGGATGATGGGGTGGAGAGGATTCGGGTTAAGAG
GGAGAGAGGGATGTCTGTTGCTGCTAGGATTAAGCAGGAGAGGGCGGTGT
CGATGGTTGGGGATGGGGATGGGGATGTGGAGGAGGTTGATATGGATGAA
GAAGGGGGAGGGGAAGAGGGTGGGTATGATTCTATGTATGATGAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006714CBS51388_006714Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006714-T1.exon1CBS51388_006714-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006714-T1.exon2CBS51388_006714-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006714-T1.cdsCBS51388_006714-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006714-T1CBS51388_006714-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_11.4
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR004181
DBxrefPFAM:PF11789
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:632627..634326 +
Powered by Drupal