You are here

Home

CBS51388_006718-T1, CBS51388_006718-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006718-T1
Unique NameCBS51388_006718-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:650974..651889-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006718-T1 ID=CBS51388_006718-T1|Name=CBS51388_006718-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=916bp|location=Sequence derived from alignment at An11:650974..651889- (Aspergillus niger CBS 513.88)
ATGGTCGCAGACGCTTTAGTTTACCATCCCGCCTTGGCGCACTACCTGCG
CTTTGTCGCAACGACCGGTACGTGCCGGCTTTCTATCTGTCCTGCGCTGC
TGGTTTCTCGGCCGGGAGAGAGCAATATGCCCCAATGCAGGGGAGATGTC
TCTCGTGCTTCTGCAGGATACACTTGATCACATTCCAGCATATCACTAAT
ATCTCTCAGTCGGTCGCGATAAGATCCTTCGAACCCTGCAGTACTTCTCC
CGCTTCTATGCTTGGTACCTCTACCGCACCAACCGCCCCCAGTCCGCCAT
CGAGCCTTTCAACGCTGTCAAGAAGCAGTTCGGAACAACTCGGAAGATTC
TGCGGATCGGCAAGTTTGTTGAGCATCTGAAGGCAGCCGCATTGGCCTCC
GACAACAAGAACCCTATCGACCCTGTACTCCGTTATCTCGCCGTCGGCCG
TCAGCTTGGCTACGCGGGCTACCTCTCTCTCGATACAGTCACCGTTATTG
ACACGATCGGTGTTCGTAAGCTTGCTTCGGCCAAGCGACTGCAGGAGCAC
GCTTACCGTTCATGGATGGCGGGCTTGGTCTGCAGCGCTGTCGCGGGCGT
ATACACTCTGTTCAGGTTGCGGGAGAAGGAGAAGACCCTCGACCGCAAGG
AAGGCGAAGGTGTTGTGGAGGCCAAGAAGCTTGAGAAGTATGTGTTATGT
TCTTTGGCCCAATCTACTCGCGCTGGGTCAGTATACTAACATTGTATTTG
CAGGGAGCGTTCTGCCGCACGCATTCAGCTCATTTCCGACCTTTGTGACC
TGAGCGTGCCAGTGTCCGCCCTCGGACTGGCATCTCTCGATGACGGCATC
GTGGGTCTTGCAGGAACGGTCAGCAGTTTGATCGGTATCTGGTCCCAGTG
GCGGAAGACTGCGTAA
back to top

Coding sequence (CDS) from alignment at An11:650974..651889-

>CBS51388_006718-T1 ID=CBS51388_006718-T1|Name=CBS51388_006718-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2124bp|location=Sequence derived from alignment at An11:650974..651889- (Aspergillus niger CBS 513.88)
GGAGCGTTCTGCCGCACGCATTCAGCTCATTTCCGACCTTTGTGACCTGA
GCGTGCCAGTGTCCGCCCTCGGACTGGCATCTCTCGATGACGGCATCGTG
GGTCTTGCAGGAACGGTCAGCAGTTTGATCGGTATCTGGTCCCAGTGGCG
GAAGACTGCGTAATCGGTCGCGATAAGATCCTTCGAACCCTGCAGTACTT
CTCCCGCTTCTATGCTTGGTACCTCTACCGCACCAACCGCCCCCAGTCCG
CCATCGAGCCTTTCAACGCTGTCAAGAAGCAGTTCGGAACAACTCGGAAG
ATTCTGCGGATCGGCAAGTTTGTTGAGCATCTGAAGGCAGCCGCATTGGC
CTCCGACAACAAGAACCCTATCGACCCTGTACTCCGTTATCTCGCCGTCG
GCCGTCAGCTTGGCTACGCGGGCTACCTCTCTCTCGATACAGTCACCGTT
ATTGACACGATCGGTGTTCGTAAGCTTGCTTCGGCCAAGCGACTGCAGGA
GCACGCTTACCGTTCATGGATGGCGGGCTTGGTCTGCAGCGCTGTCGCGG
GCGTATACACTCTGTTCAGGTTGCGGGAGAAGGAGAAGACCCTCGACCGC
AAGGAAGGCGAAGGTGTTGTGGAGGCCAAGAAGCTTGAGAAATGGTCGCA
GACGCTTTAGTTTACCATCCCGCCTTGGCGCACTACCTGCGCTTTGTCGC
AACGACCGGGAGCGTTCTGCCGCACGCATTCAGCTCATTTCCGACCTTTG
TGACCTGAGCGTGCCAGTGTCCGCCCTCGGACTGGCATCTCTCGATGACG
GCATCGTGGGTCTTGCAGGAACGGTCAGCAGTTTGATCGGTATCTGGTCC
CAGTGGCGGAAGACTGCGTAATCGGTCGCGATAAGATCCTTCGAACCCTG
CAGTACTTCTCCCGCTTCTATGCTTGGTACCTCTACCGCACCAACCGCCC
CCAGTCCGCCATCGAGCCTTTCAACGCTGTCAAGAAGCAGTTCGGAACAA
CTCGGAAGATTCTGCGGATCGGCAAGTTTGTTGAGCATCTGAAGGCAGCC
GCATTGGCCTCCGACAACAAGAACCCTATCGACCCTGTACTCCGTTATCT
CGCCGTCGGCCGTCAGCTTGGCTACGCGGGCTACCTCTCTCTCGATACAG
TCACCGTTATTGACACGATCGGTGTTCGTAAGCTTGCTTCGGCCAAGCGA
CTGCAGGAGCACGCTTACCGTTCATGGATGGCGGGCTTGGTCTGCAGCGC
TGTCGCGGGCGTATACACTCTGTTCAGGTTGCGGGAGAAGGAGAAGACCC
TCGACCGCAAGGAAGGCGAAGGTGTTGTGGAGGCCAAGAAGCTTGAGAAA
TGGTCGCAGACGCTTTAGTTTACCATCCCGCCTTGGCGCACTACCTGCGC
TTTGTCGCAACGACCGGGAGCGTTCTGCCGCACGCATTCAGCTCATTTCC
GACCTTTGTGACCTGAGCGTGCCAGTGTCCGCCCTCGGACTGGCATCTCT
CGATGACGGCATCGTGGGTCTTGCAGGAACGGTCAGCAGTTTGATCGGTA
TCTGGTCCCAGTGGCGGAAGACTGCGTAATCGGTCGCGATAAGATCCTTC
GAACCCTGCAGTACTTCTCCCGCTTCTATGCTTGGTACCTCTACCGCACC
AACCGCCCCCAGTCCGCCATCGAGCCTTTCAACGCTGTCAAGAAGCAGTT
CGGAACAACTCGGAAGATTCTGCGGATCGGCAAGTTTGTTGAGCATCTGA
AGGCAGCCGCATTGGCCTCCGACAACAAGAACCCTATCGACCCTGTACTC
CGTTATCTCGCCGTCGGCCGTCAGCTTGGCTACGCGGGCTACCTCTCTCT
CGATACAGTCACCGTTATTGACACGATCGGTGTTCGTAAGCTTGCTTCGG
CCAAGCGACTGCAGGAGCACGCTTACCGTTCATGGATGGCGGGCTTGGTC
TGCAGCGCTGTCGCGGGCGTATACACTCTGTTCAGGTTGCGGGAGAAGGA
GAAGACCCTCGACCGCAAGGAAGGCGAAGGTGTTGTGGAGGCCAAGAAGC
TTGAGAAATGGTCGCAGACGCTTTAGTTTACCATCCCGCCTTGGCGCACT
ACCTGCGCTTTGTCGCAACGACCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005779integral component of peroxisomal membrane
Vocabulary: Biological Process
TermDefinition
GO:0016559peroxisome fission
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006718CBS51388_006718Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006718-T1CBS51388_006718-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006718-T1.cdsCBS51388_006718-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006718-T1.exon3CBS51388_006718-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006718-T1.exon2CBS51388_006718-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006718-T1.exon1CBS51388_006718-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG0926436T
DBxrefInterPro:IPR008733
DBxrefPFAM:PF05648
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:650974..651889 -
Powered by Drupal