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CBS51388_006722-T1, CBS51388_006722-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006722-T1
Unique NameCBS51388_006722-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:662432..664148+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006722-T1 ID=CBS51388_006722-T1|Name=CBS51388_006722-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1717bp|location=Sequence derived from alignment at An11:662432..664148+ (Aspergillus niger CBS 513.88)
ATGGGTGACAAGGATGACGGTCCGCTACAGGTTAGTCTGCCTAAAATTGT
GCGCGCCTTTCGCCAACACAAACGCAATGGCCGGTGCCAAACGGGATGTA
AACAGCTGATGCTGAGATCGAATCGCGTCGTAGGACCTGGAAAAGACATA
CTGCCCTCCTCTGGACCCTGCCTTGCTCACAGCCATCGCCTTCGACTATG
ACCTTACAGACTCTGCTCAACTTGGCCAACTGCGCGAGACTCTTGATGCA
CTTCGGCTGTCTGCATGGGAACAGGAGGATTTACCCTTCGACCCCTCCGG
CACGTCCGGTTTAGGTGCAGGACATGGCCTAGAAGCGGATGGGTCCTCTG
AGCTTAGTGAGTCCCAGGGAGACCGGTCGCGGGAGACAGATGTCACTAGC
CTCACGTCGGGCTTCTCTTCGGTCGGTATCAGGGACCATGTCTCGTATAC
TATTGGACCGGATGGGTCTCTCCATCTATCCGGAGCGAATGAAGAGGATA
AGATCGGCTATTTGACTGAGATGTTCCCGTCAGTTGACCGGTTTACAATC
CAGCACACATTGAAGAAGTCTAATGGGGACATTGATCGCTCGATGGACGT
CCTTCTCAACTTGTCGTTCTTTGATGAGCAAGTACCTGATGAGGATGGGG
TGGTCACTGTCCCTAAGGGGGTGGATGGCTTTGATGACCCGAGAGCAAGC
AAGAAGCAAGCTCGTAAGCGTAAACCCAAGAACAAGAATGGCCGAAGACA
AGAGGTCCTATCATCCATGAGCTCTGAGGCTAGTTTCGAGAACACAACGA
ACAAGTGGGATGCTGCTGGAAAGGACGTTGAGTTCATTCATGCGCGAACC
TCGGCGATACTGAAAAAGGAGACCGTCCGCTCAACTTATCACGCTAATGG
GGCCTCACTTCCTGCTACAATCAGGGCTCTTGCCGATACACACGCCCCTA
AGAAGCAGATCGATGAGGATCCGGTGACGGTTACGCAAGTGGCCGAGCTT
ACGCAAGAATTTCCGTCGGTGCCACCGCTCACATTTGCCGGCTTGCTTAA
AATCACGAGAAGTTCTGTATCAGCCGCCAGTGAGCTCGCGGCGGCTATGC
TGACAAGCCCCGTGGCTCCGTCCATAACTGAGATAATCAAGATCACCACA
GCACCCCCACCAGTGGACGTTGACGAGGAGATTCCGAAACGAGGCGCTGC
GCCGGTCACCCGAGACCTCAACCGAGCAAGAAGTGCAGCAGGCGTGCATT
TTGCAGCTGGTGCTGAGGCACTGTCAAAAGCATCGGTAGCATATCGGCGC
GGTAAATCAGATCGGTTGATGGGAGGTGCGGCTGCCTACTACTCCGCAGT
AGGACGAGACCACTTGGAACGAGCCAAACGCAATGCCGCTGCTGCCGCCG
ATGCCCTGGTAGACACACAGTCTACATGGAACTCGCTGGATCTGCATGGT
GTATCTGTACAGGATGCAGTGCGGATCGCTAGCGAGCGGGTGTCTGAATG
GTGGGACTCTCTAGGCGATGCCAAATATTCGCGTGGAAGTGGAGCTAGAG
ATCCTATTCAGGGTGGCTATCGCATTGTTACTGGGCTTGGACGGCATAGT
CATGATGGCACTTCACGCTTGGGCCCGGCTGTTGCAAAGATGCTGGCCCG
AGAAGGCTGGAGGGTAGAGATTGGTGCCGGAGTTTTGACCGTCGTTGGAG
TTGTCCGACGTCGCTGA
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Coding sequence (CDS) from alignment at An11:662432..664148+

>CBS51388_006722-T1 ID=CBS51388_006722-T1|Name=CBS51388_006722-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3228bp|location=Sequence derived from alignment at An11:662432..664148+ (Aspergillus niger CBS 513.88)
ATGGGTGACAAGGATGACGGTCCGCTACAGGACCTGGAAAAGACATACTG
CCCTCCTCTGGACCCTGCCTTGCTCACAGCCATCGCCTTCGACTATGACC
TTACAGACTCTGCTCAACTTGGCCAACTGCGCGAGACTCTTGATGCACTT
CGGCTGTCTGCATGGGAACAGGAGGATTTACCCTTCGACCCCTCCGGCAC
GTCCGGTTTAGGTGCAGGACATGGCCTAGAAGCGGATGGGTCCTCTGAGC
TTAGTGAGTCCCAGGGAGACCGGTCGCGGGAGACAGATGTCACTAGCCTC
ACGTCGGGCTTCTCTTCGGTCGGTATCAGGGACCATGTCTCGTATACTAT
TGGACCGGATGGGTCTCTCCATCTATCCGGAGCGAATGAAGAGGATAAGA
TCGGCTATTTGACTGAGATGTTCCCGTCAGTTGACCGGTTTACAATCCAG
CACACATTGAAGAAGTCTAATGGGGACATTGATCGCTCGATGGACGTCCT
TCTCAACTTGTCGTTCTTTGATGAGCAAGTACCTGATGAGGATGGGGTGG
TCACTGTCCCTAAGGGGGTGGATGGCTTTGATGACCCGAGAGCAAGCAAG
AAGCAAGCTCGTAAGCGTAAACCCAAGAACAAGAATGGCCGAAGACAAGA
GGTCCTATCATCCATGAGCTCTGAGGCTAGTTTCGAGAACACAACGAACA
AGTGGGATGCTGCTGGAAAGGACGTTGAGTTCATTCATGCGCGAACCTCG
GCGATACTGAAAAAGGAGACCGTCCGCTCAACTTATCACGCTAATGGGGC
CTCACTTCCTGCTACAATCAGGGCTCTTGCCGATACACACGCCCCTAAGA
AGCAGATCGATGAGGATCCGGTGACGGTTACGCAAGTGGCCGAGCTTACG
CAAGAATTTCCGTCGGTGCCACCGCTCACATTTGCCGGCTTGCTTAAAAT
CACGAGAAGTTCTGTATCAGCCGCCAGTGAGCTCGCGGCGGCTATGCTGA
CAAGCCCCGTGGCTCCGTCCATAACTGAGATAATCAAGATCACCACAGCA
CCCCCACCAGTGGACGTTGACGAGGAGATTCCGAAACGAGGCGCTGCGCC
GGTCACCCGAGACCTCAACCGAGCAAGAAGTGCAGCAGGCGTGCATTTTG
CAGCTGGTGCTGAGGCACTGTCAAAAGCATCGGTAGCATATCGGCGCGGT
AAATCAGATCGGTTGATGGGAGGTGCGGCTGCCTACTACTCCGCAGTAGG
ACGAGACCACTTGGAACGAGCCAAACGCAATGCCGCTGCTGCCGCCGATG
CCCTGGTAGACACACAGTCTACATGGAACTCGCTGGATCTGCATGGTGTA
TCTGTACAGGATGCAGTGCGGATCGCTAGCGAGCGGGTGTCTGAATGGTG
GGACTCTCTAGGCGATGCCAAATATTCGCGTGGAAGTGGAGCTAGAGATC
CTATTCAGGGTGGCTATCGCATTGTTACTGGGCTTGGACGGCATAGTCAT
GATGGCACTTCACGCTTGGGCCCGGCTGTTGCAAAGATGCTGGCCCGAGA
AGGCTGGAGGGTAGAGATTGGTGCCGGAGTTTTGACCGTCGTTGGAGTTG
TCCGACGTCGCTGAATGGGTGACAAGGATGACGGTCCGCTACAGGACCTG
GAAAAGACATACTGCCCTCCTCTGGACCCTGCCTTGCTCACAGCCATCGC
CTTCGACTATGACCTTACAGACTCTGCTCAACTTGGCCAACTGCGCGAGA
CTCTTGATGCACTTCGGCTGTCTGCATGGGAACAGGAGGATTTACCCTTC
GACCCCTCCGGCACGTCCGGTTTAGGTGCAGGACATGGCCTAGAAGCGGA
TGGGTCCTCTGAGCTTAGTGAGTCCCAGGGAGACCGGTCGCGGGAGACAG
ATGTCACTAGCCTCACGTCGGGCTTCTCTTCGGTCGGTATCAGGGACCAT
GTCTCGTATACTATTGGACCGGATGGGTCTCTCCATCTATCCGGAGCGAA
TGAAGAGGATAAGATCGGCTATTTGACTGAGATGTTCCCGTCAGTTGACC
GGTTTACAATCCAGCACACATTGAAGAAGTCTAATGGGGACATTGATCGC
TCGATGGACGTCCTTCTCAACTTGTCGTTCTTTGATGAGCAAGTACCTGA
TGAGGATGGGGTGGTCACTGTCCCTAAGGGGGTGGATGGCTTTGATGACC
CGAGAGCAAGCAAGAAGCAAGCTCGTAAGCGTAAACCCAAGAACAAGAAT
GGCCGAAGACAAGAGGTCCTATCATCCATGAGCTCTGAGGCTAGTTTCGA
GAACACAACGAACAAGTGGGATGCTGCTGGAAAGGACGTTGAGTTCATTC
ATGCGCGAACCTCGGCGATACTGAAAAAGGAGACCGTCCGCTCAACTTAT
CACGCTAATGGGGCCTCACTTCCTGCTACAATCAGGGCTCTTGCCGATAC
ACACGCCCCTAAGAAGCAGATCGATGAGGATCCGGTGACGGTTACGCAAG
TGGCCGAGCTTACGCAAGAATTTCCGTCGGTGCCACCGCTCACATTTGCC
GGCTTGCTTAAAATCACGAGAAGTTCTGTATCAGCCGCCAGTGAGCTCGC
GGCGGCTATGCTGACAAGCCCCGTGGCTCCGTCCATAACTGAGATAATCA
AGATCACCACAGCACCCCCACCAGTGGACGTTGACGAGGAGATTCCGAAA
CGAGGCGCTGCGCCGGTCACCCGAGACCTCAACCGAGCAAGAAGTGCAGC
AGGCGTGCATTTTGCAGCTGGTGCTGAGGCACTGTCAAAAGCATCGGTAG
CATATCGGCGCGGTAAATCAGATCGGTTGATGGGAGGTGCGGCTGCCTAC
TACTCCGCAGTAGGACGAGACCACTTGGAACGAGCCAAACGCAATGCCGC
TGCTGCCGCCGATGCCCTGGTAGACACACAGTCTACATGGAACTCGCTGG
ATCTGCATGGTGTATCTGTACAGGATGCAGTGCGGATCGCTAGCGAGCGG
GTGTCTGAATGGTGGGACTCTCTAGGCGATGCCAAATATTCGCGTGGAAG
TGGAGCTAGAGATCCTATTCAGGGTGGCTATCGCATTGTTACTGGGCTTG
GACGGCATAGTCATGATGGCACTTCACGCTTGGGCCCGGCTGTTGCAAAG
ATGCTGGCCCGAGAAGGCTGGAGGGTAGAGATTGGTGCCGGAGTTTTGAC
CGTCGTTGGAGTTGTCCGACGTCGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006722CBS51388_006722Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006722-T1.exon1CBS51388_006722-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006722-T1.exon2CBS51388_006722-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006722-T1.cdsCBS51388_006722-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006722-T1CBS51388_006722-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR036063
DBxrefInterPro:IPR003892
DBxrefInterPro:IPR002625
DBxrefInterPro:IPR013899
DBxrefPFAM:PF08590
DBxrefPFAM:PF02845
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:662432..664148 +
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