You are here

Home

CBS51388_006726-T1, CBS51388_006726-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006726-T1
Unique NameCBS51388_006726-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:671697..674044-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006726-T1 ID=CBS51388_006726-T1|Name=CBS51388_006726-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2348bp|location=Sequence derived from alignment at An11:671697..674044- (Aspergillus niger CBS 513.88)
ATGTCTTCCCAAACCCCCCGCACGTCCCTCCGAGGTAAGTGCTATCACCC
TCATTTTGCCCTGTCACTCGCGTCTTTGTTGGACGACCAGTGCTAACCGT
CCGTAGAGGGCTTGCGGCAGGCTCCCAAGGCCAATCAACCATTCATTCCC
GATACTGCTCCGGTTCGGCGCTCACACCACAACTCAAATCAATCACCTCA
GCCAAGCTCGATGTCACAAACGCATTCGAATTCCCCCGCGCCCAACTCAA
ACAATTCACATCTACCCACGGAGGGCTGGGACGGCAAAGAGCAGAAAGTA
CCTATGAACACACGCGAAGTAGCAACCCCAGGCAACAGGCCGGGCCTCTT
TCTCACCGTACCGGGCAAAGTGGCTAAACAACCTGATTTCTACGACCCTT
ACTTTCCCCTCAGATACCTCGAGGTCCCCAAGTGTGCGTAGGCCTTTGCA
GCAACCCATGATTATGACGATAATACCACTGACACCCTATAGCGGACCAT
ATCTATAAGCGCGCCCACTACGGCCTACAATCTGGTATATCAGATGAGGT
CGATTTCGCTCTGTACCATCTTGTTCAGATTTCCAACCAGCGCTGGGACA
AATTCAAGTTCGAGGGTTTCCCTTTGCTGGCCGAAACTCTGATGGAAAAA
GCCATTGATGTCTCCATAATATGCACGGGCGTAAAATGGGAACTCCAGTA
CGAATACCGCCATCCTATGGAGCGTGTTAATGTCCTCAACTCGCTACATG
GAACACGCGATTTGCTCGAGAGGATTAAGAGAATTCCCGTCACCCTGCCA
AGTGATACTCTCGAAACGCACGAGTTCAACCACCGTCTACGGAATGTCAA
AGAAGCTACCCTGGTTCTCCGGAACATGGTTCTACTCCCAGATAACGCGT
TCTATGTCTCACGTTATGCGAAGGGACTTTTGAGGGACTTCCTGGTCATA
CTGCTCAATCTTCCCAACCAGCCTCGCCTCAACGAAATCAAGAACGATGC
GTTAGACATTGCGGAAGAGGTTACCAAGTTCATGAGGACCGACCCTGAAG
ACCCGCTTTGGATCTCTCTCCTCCACTGCCTCGAGTCCCCAGATCGTGCC
CACGTCGTCCGGGCGCTCTGGGCGCTCACCCATTTCTCCACTGAAATCAA
CGATTCTGAGGGTAACCAAGCCTTGGAACGCATGCCTAAACAATCCCTGC
AACAGATGTACTTCCACACGCTTCTGGACTTGGACAAGGATATCCTCAGC
GGAGCGTTGGACTTTTGGTACCAGTACACGCTTTCCCGCGAGAACATCGA
GACCATGCTTGACATCTTCGATTTCCCAAGCGTGTTCGTTCCGCGAATGA
TCGCCCTATTAACTCACGAAGCGCGTCCCAGCAAGAAAGAGACCGTTCTG
CAAGAGGAGAAAGTCGCACCGCCGCCATCCGAGATCCCTCGTGTGCCGGC
AGAACTACTGAAGGATCTCATGGAGCTACAAGAGCCGGAACGTAGCTCAC
GCTGGCTGCGTTGTTGCTTCGTTGAGGATGCTGAATGCGAAATTACTCAA
ATAGCTCTGTGGCAGGCATACCAGAGCCGATTCGCAGACCCCCGTGTTCC
GGGTGGTGGTGTCCTCCCTGCCGCCGAATTCATTAAGAATGTCAGCACGA
CATTCACCAATGCGCAAGCGCAGGTCATCAACGGCCCTGGCGCGGCGACT
CGCTTTATCATCAAGGGCATCCGTCCGTTAGAAACAGCCTACACCTTCCA
GGGATTCCCCTACCAATATTGCAAATGGGCCGACAACTCGAAGCCCACCA
AAACCTGCCAGCGCGCTTTCACAACTCCCACCGACCTGCGCAACCACGTT
TTCGCCGACCACATGGAGCTCAAGCCTACGGACACGCCAGGCCACTACAA
TCTGGACAATGCCGAATCCCCGATTCACACGTGCCTCTGGGATAACTGCA
CCCGGTTCCGTTCTTCCGGCCCCAGCAACAATACCGCCATGGTAGCGGGT
CATGTGGCATCACACCTGCCTGAAGAGCGCCCTGCTGATGCAGAACCCCC
GATCTCTAAGCGTGCTGTACTTCAGGAGCGGATCGTCCGCAAATGGTTCT
ACATGGATACGCCGGTCAATGAGAGAGCCGAACCCTTCGGTGTGGCCTAC
AAGGCGGCGTTGGTGCTGCGCAATATCGCCCGGAACTTACCGACCGGCAT
GGCTCAGAAATACAATGGCCTCTCGTGGAAGAAAGCCGTTTTCCTCAGTC
ACCGGCCGAAGATTGTGGAAACGTGGGACCGTAACCGGTCGCTGCGTAAG
GAACTCACTGAATTGATTATGATAATAGAGAAAGAGGATTACTATTGA
back to top

Coding sequence (CDS) from alignment at An11:671697..674044-

>CBS51388_006726-T1 ID=CBS51388_006726-T1|Name=CBS51388_006726-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6651bp|location=Sequence derived from alignment at An11:671697..674044- (Aspergillus niger CBS 513.88)
CGGACCATATCTATAAGCGCGCCCACTACGGCCTACAATCTGGTATATCA
GATGAGGTCGATTTCGCTCTGTACCATCTTGTTCAGATTTCCAACCAGCG
CTGGGACAAATTCAAGTTCGAGGGTTTCCCTTTGCTGGCCGAAACTCTGA
TGGAAAAAGCCATTGATGTCTCCATAATATGCACGGGCGTAAAATGGGAA
CTCCAGTACGAATACCGCCATCCTATGGAGCGTGTTAATGTCCTCAACTC
GCTACATGGAACACGCGATTTGCTCGAGAGGATTAAGAGAATTCCCGTCA
CCCTGCCAAGTGATACTCTCGAAACGCACGAGTTCAACCACCGTCTACGG
AATGTCAAAGAAGCTACCCTGGTTCTCCGGAACATGGTTCTACTCCCAGA
TAACGCGTTCTATGTCTCACGTTATGCGAAGGGACTTTTGAGGGACTTCC
TGGTCATACTGCTCAATCTTCCCAACCAGCCTCGCCTCAACGAAATCAAG
AACGATGCGTTAGACATTGCGGAAGAGGTTACCAAGTTCATGAGGACCGA
CCCTGAAGACCCGCTTTGGATCTCTCTCCTCCACTGCCTCGAGTCCCCAG
ATCGTGCCCACGTCGTCCGGGCGCTCTGGGCGCTCACCCATTTCTCCACT
GAAATCAACGATTCTGAGGGTAACCAAGCCTTGGAACGCATGCCTAAACA
ATCCCTGCAACAGATGTACTTCCACACGCTTCTGGACTTGGACAAGGATA
TCCTCAGCGGAGCGTTGGACTTTTGGTACCAGTACACGCTTTCCCGCGAG
AACATCGAGACCATGCTTGACATCTTCGATTTCCCAAGCGTGTTCGTTCC
GCGAATGATCGCCCTATTAACTCACGAAGCGCGTCCCAGCAAGAAAGAGA
CCGTTCTGCAAGAGGAGAAAGTCGCACCGCCGCCATCCGAGATCCCTCGT
GTGCCGGCAGAACTACTGAAGGATCTCATGGAGCTACAAGAGCCGGAACG
TAGCTCACGCTGGCTGCGTTGTTGCTTCGTTGAGGATGCTGAATGCGAAA
TTACTCAAATAGCTCTGTGGCAGGCATACCAGAGCCGATTCGCAGACCCC
CGTGTTCCGGGTGGTGGTGTCCTCCCTGCCGCCGAATTCATTAAGAATGT
CAGCACGACATTCACCAATGCGCAAGCGCAGGTCATCAACGGCCCTGGCG
CGGCGACTCGCTTTATCATCAAGGGCATCCGTCCGTTAGAAACAGCCTAC
ACCTTCCAGGGATTCCCCTACCAATATTGCAAATGGGCCGACAACTCGAA
GCCCACCAAAACCTGCCAGCGCGCTTTCACAACTCCCACCGACCTGCGCA
ACCACGTTTTCGCCGACCACATGGAGCTCAAGCCTACGGACACGCCAGGC
CACTACAATCTGGACAATGCCGAATCCCCGATTCACACGTGCCTCTGGGA
TAACTGCACCCGGTTCCGTTCTTCCGGCCCCAGCAACAATACCGCCATGG
TAGCGGGTCATGTGGCATCACACCTGCCTGAAGAGCGCCCTGCTGATGCA
GAACCCCCGATCTCTAAGCGTGCTGTACTTCAGGAGCGGATCGTCCGCAA
ATGGTTCTACATGGATACGCCGGTCAATGAGAGAGCCGAACCCTTCGGTG
TGGCCTACAAGGCGGCGTTGGTGCTGCGCAATATCGCCCGGAACTTACCG
ACCGGCATGGCTCAGAAATACAATGGCCTCTCGTGGAAGAAAGCCGTTTT
CCTCAGTCACCGGCCGAAGATTGTGGAAACGTGGGACCGTAACCGGTCGC
TGCGTAAGGAACTCACTGAATTGATTATGATAATAGAGAAAGAGGATTAC
TATTGAAGGGCTTGCGGCAGGCTCCCAAGGCCAATCAACCATTCATTCCC
GATACTGCTCCGGTTCGGCGCTCACACCACAACTCAAATCAATCACCTCA
GCCAAGCTCGATGTCACAAACGCATTCGAATTCCCCCGCGCCCAACTCAA
ACAATTCACATCTACCCACGGAGGGCTGGGACGGCAAAGAGCAGAAAGTA
CCTATGAACACACGCGAAGTAGCAACCCCAGGCAACAGGCCGGGCCTCTT
TCTCACCGTACCGGGCAAAGTGGCTAAACAACCTGATTTCTACGACCCTT
ACTTTCCCCTCAGATACCTCGAGGTCCCCAAGTATGTCTTCCCAAACCCC
CCGCACGTCCCTCCGAGCGGACCATATCTATAAGCGCGCCCACTACGGCC
TACAATCTGGTATATCAGATGAGGTCGATTTCGCTCTGTACCATCTTGTT
CAGATTTCCAACCAGCGCTGGGACAAATTCAAGTTCGAGGGTTTCCCTTT
GCTGGCCGAAACTCTGATGGAAAAAGCCATTGATGTCTCCATAATATGCA
CGGGCGTAAAATGGGAACTCCAGTACGAATACCGCCATCCTATGGAGCGT
GTTAATGTCCTCAACTCGCTACATGGAACACGCGATTTGCTCGAGAGGAT
TAAGAGAATTCCCGTCACCCTGCCAAGTGATACTCTCGAAACGCACGAGT
TCAACCACCGTCTACGGAATGTCAAAGAAGCTACCCTGGTTCTCCGGAAC
ATGGTTCTACTCCCAGATAACGCGTTCTATGTCTCACGTTATGCGAAGGG
ACTTTTGAGGGACTTCCTGGTCATACTGCTCAATCTTCCCAACCAGCCTC
GCCTCAACGAAATCAAGAACGATGCGTTAGACATTGCGGAAGAGGTTACC
AAGTTCATGAGGACCGACCCTGAAGACCCGCTTTGGATCTCTCTCCTCCA
CTGCCTCGAGTCCCCAGATCGTGCCCACGTCGTCCGGGCGCTCTGGGCGC
TCACCCATTTCTCCACTGAAATCAACGATTCTGAGGGTAACCAAGCCTTG
GAACGCATGCCTAAACAATCCCTGCAACAGATGTACTTCCACACGCTTCT
GGACTTGGACAAGGATATCCTCAGCGGAGCGTTGGACTTTTGGTACCAGT
ACACGCTTTCCCGCGAGAACATCGAGACCATGCTTGACATCTTCGATTTC
CCAAGCGTGTTCGTTCCGCGAATGATCGCCCTATTAACTCACGAAGCGCG
TCCCAGCAAGAAAGAGACCGTTCTGCAAGAGGAGAAAGTCGCACCGCCGC
CATCCGAGATCCCTCGTGTGCCGGCAGAACTACTGAAGGATCTCATGGAG
CTACAAGAGCCGGAACGTAGCTCACGCTGGCTGCGTTGTTGCTTCGTTGA
GGATGCTGAATGCGAAATTACTCAAATAGCTCTGTGGCAGGCATACCAGA
GCCGATTCGCAGACCCCCGTGTTCCGGGTGGTGGTGTCCTCCCTGCCGCC
GAATTCATTAAGAATGTCAGCACGACATTCACCAATGCGCAAGCGCAGGT
CATCAACGGCCCTGGCGCGGCGACTCGCTTTATCATCAAGGGCATCCGTC
CGTTAGAAACAGCCTACACCTTCCAGGGATTCCCCTACCAATATTGCAAA
TGGGCCGACAACTCGAAGCCCACCAAAACCTGCCAGCGCGCTTTCACAAC
TCCCACCGACCTGCGCAACCACGTTTTCGCCGACCACATGGAGCTCAAGC
CTACGGACACGCCAGGCCACTACAATCTGGACAATGCCGAATCCCCGATT
CACACGTGCCTCTGGGATAACTGCACCCGGTTCCGTTCTTCCGGCCCCAG
CAACAATACCGCCATGGTAGCGGGTCATGTGGCATCACACCTGCCTGAAG
AGCGCCCTGCTGATGCAGAACCCCCGATCTCTAAGCGTGCTGTACTTCAG
GAGCGGATCGTCCGCAAATGGTTCTACATGGATACGCCGGTCAATGAGAG
AGCCGAACCCTTCGGTGTGGCCTACAAGGCGGCGTTGGTGCTGCGCAATA
TCGCCCGGAACTTACCGACCGGCATGGCTCAGAAATACAATGGCCTCTCG
TGGAAGAAAGCCGTTTTCCTCAGTCACCGGCCGAAGATTGTGGAAACGTG
GGACCGTAACCGGTCGCTGCGTAAGGAACTCACTGAATTGATTATGATAA
TAGAGAAAGAGGATTACTATTGAAGGGCTTGCGGCAGGCTCCCAAGGCCA
ATCAACCATTCATTCCCGATACTGCTCCGGTTCGGCGCTCACACCACAAC
TCAAATCAATCACCTCAGCCAAGCTCGATGTCACAAACGCATTCGAATTC
CCCCGCGCCCAACTCAAACAATTCACATCTACCCACGGAGGGCTGGGACG
GCAAAGAGCAGAAAGTACCTATGAACACACGCGAAGTAGCAACCCCAGGC
AACAGGCCGGGCCTCTTTCTCACCGTACCGGGCAAAGTGGCTAAACAACC
TGATTTCTACGACCCTTACTTTCCCCTCAGATACCTCGAGGTCCCCAAGT
ATGTCTTCCCAAACCCCCCGCACGTCCCTCCGAGCGGACCATATCTATAA
GCGCGCCCACTACGGCCTACAATCTGGTATATCAGATGAGGTCGATTTCG
CTCTGTACCATCTTGTTCAGATTTCCAACCAGCGCTGGGACAAATTCAAG
TTCGAGGGTTTCCCTTTGCTGGCCGAAACTCTGATGGAAAAAGCCATTGA
TGTCTCCATAATATGCACGGGCGTAAAATGGGAACTCCAGTACGAATACC
GCCATCCTATGGAGCGTGTTAATGTCCTCAACTCGCTACATGGAACACGC
GATTTGCTCGAGAGGATTAAGAGAATTCCCGTCACCCTGCCAAGTGATAC
TCTCGAAACGCACGAGTTCAACCACCGTCTACGGAATGTCAAAGAAGCTA
CCCTGGTTCTCCGGAACATGGTTCTACTCCCAGATAACGCGTTCTATGTC
TCACGTTATGCGAAGGGACTTTTGAGGGACTTCCTGGTCATACTGCTCAA
TCTTCCCAACCAGCCTCGCCTCAACGAAATCAAGAACGATGCGTTAGACA
TTGCGGAAGAGGTTACCAAGTTCATGAGGACCGACCCTGAAGACCCGCTT
TGGATCTCTCTCCTCCACTGCCTCGAGTCCCCAGATCGTGCCCACGTCGT
CCGGGCGCTCTGGGCGCTCACCCATTTCTCCACTGAAATCAACGATTCTG
AGGGTAACCAAGCCTTGGAACGCATGCCTAAACAATCCCTGCAACAGATG
TACTTCCACACGCTTCTGGACTTGGACAAGGATATCCTCAGCGGAGCGTT
GGACTTTTGGTACCAGTACACGCTTTCCCGCGAGAACATCGAGACCATGC
TTGACATCTTCGATTTCCCAAGCGTGTTCGTTCCGCGAATGATCGCCCTA
TTAACTCACGAAGCGCGTCCCAGCAAGAAAGAGACCGTTCTGCAAGAGGA
GAAAGTCGCACCGCCGCCATCCGAGATCCCTCGTGTGCCGGCAGAACTAC
TGAAGGATCTCATGGAGCTACAAGAGCCGGAACGTAGCTCACGCTGGCTG
CGTTGTTGCTTCGTTGAGGATGCTGAATGCGAAATTACTCAAATAGCTCT
GTGGCAGGCATACCAGAGCCGATTCGCAGACCCCCGTGTTCCGGGTGGTG
GTGTCCTCCCTGCCGCCGAATTCATTAAGAATGTCAGCACGACATTCACC
AATGCGCAAGCGCAGGTCATCAACGGCCCTGGCGCGGCGACTCGCTTTAT
CATCAAGGGCATCCGTCCGTTAGAAACAGCCTACACCTTCCAGGGATTCC
CCTACCAATATTGCAAATGGGCCGACAACTCGAAGCCCACCAAAACCTGC
CAGCGCGCTTTCACAACTCCCACCGACCTGCGCAACCACGTTTTCGCCGA
CCACATGGAGCTCAAGCCTACGGACACGCCAGGCCACTACAATCTGGACA
ATGCCGAATCCCCGATTCACACGTGCCTCTGGGATAACTGCACCCGGTTC
CGTTCTTCCGGCCCCAGCAACAATACCGCCATGGTAGCGGGTCATGTGGC
ATCACACCTGCCTGAAGAGCGCCCTGCTGATGCAGAACCCCCGATCTCTA
AGCGTGCTGTACTTCAGGAGCGGATCGTCCGCAAATGGTTCTACATGGAT
ACGCCGGTCAATGAGAGAGCCGAACCCTTCGGTGTGGCCTACAAGGCGGC
GTTGGTGCTGCGCAATATCGCCCGGAACTTACCGACCGGCATGGCTCAGA
AATACAATGGCCTCTCGTGGAAGAAAGCCGTTTTCCTCAGTCACCGGCCG
AAGATTGTGGAAACGTGGGACCGTAACCGGTCGCTGCGTAAGGAACTCAC
TGAATTGATTATGATAATAGAGAAAGAGGATTACTATTGAAGGGCTTGCG
GCAGGCTCCCAAGGCCAATCAACCATTCATTCCCGATACTGCTCCGGTTC
GGCGCTCACACCACAACTCAAATCAATCACCTCAGCCAAGCTCGATGTCA
CAAACGCATTCGAATTCCCCCGCGCCCAACTCAAACAATTCACATCTACC
CACGGAGGGCTGGGACGGCAAAGAGCAGAAAGTACCTATGAACACACGCG
AAGTAGCAACCCCAGGCAACAGGCCGGGCCTCTTTCTCACCGTACCGGGC
AAAGTGGCTAAACAACCTGATTTCTACGACCCTTACTTTCCCCTCAGATA
CCTCGAGGTCCCCAAGTATGTCTTCCCAAACCCCCCGCACGTCCCTCCGA
G
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006726CBS51388_006726Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006726-T1CBS51388_006726-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006726-T1.cdsCBS51388_006726-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006726-T1.exon3CBS51388_006726-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006726-T1.exon2CBS51388_006726-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006726-T1.exon1CBS51388_006726-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09260WUA
DBxrefInterPro:IPR003150
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:671697..674044 -
Powered by Drupal