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CBS51388_006728-T1, CBS51388_006728-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006728-T1
Unique NameCBS51388_006728-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:686515..688238+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006728-T1 ID=CBS51388_006728-T1|Name=CBS51388_006728-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1724bp|location=Sequence derived from alignment at An11:686515..688238+ (Aspergillus niger CBS 513.88)
ATGCTTATCGATGGCGAGAAGTGGGCTTGTGAAGCTTGCGTCCGGGGTCA
CCGTGTCAGCAGCTGTCACCACAGTGGTAAGTGTGGCAACCATCTCTGAC
GCATCACATCTTCTTCCCGTCGCAATTGCTAACGTGGCTTGGCTGCAGAC
CGCCCCTTGACCCACATTAACAAAAAAGGCCGTCCTGTCTCCCAATGCGC
TCACTGTCGCGGCCTACGCAAGTCACGGACAACCCACACTAAGTGCGAGT
GTGGTGACAAGAAAAAGAATTGCCACAAGAATGACTTAGATCCCCATGCT
ACGGATAAGCGGGATCACAAGCGTGAGCATGATGGTGATGGTGAACTGGT
TCATAGTTTTCTGATCTGGATTTTACAGAGGACTCCCGTCCAAAATGTGG
CTGCACTCATGGTCAGCGCTGTACCTGTGCGCTGAAGAAGGAACCCCACC
TGGATACCGTTCCGGAGACCGGCCTCCCTCCACCCCCAGCTGCGACGCTG
TTGGATCAGCCCAAGAAGCCGCAGCTGACCTCGACCAAATCGGAGAGTAC
CTTGACCATCTTCCGCGATGGCCACCACAAGCCGGCTCATAAGCACAACG
ACATGGCTCATAAATGCGGTCTGCCCTATACGATACCCCGTTCTCATACC
ATCCATGCTGGCGATGTGGCCCGCCGCTCGGTCGACCACCTGCCTTTGGT
CCAGCCCACCATGCTCAACGAGGGTTTCGCGAATCAACAACAGCCCGCAG
AACAGTCACCTTCGCGCGGACAACATCGCCGTGTCAAGTCTGAACATGGT
TCTCCTGAGAGTGCCCCCGTCGTCTCGCCGGACAACGTCCCGACAACCGT
TCCCCCACTCGACATCTCGTCCTTTTTCCCTCAAGTTCAGACAGCGGAGA
ACGCTGGTGACGTTGGCGTTCCCGAGCCGGTCTCGATGCCTATGAAGACC
CCTCTGGACCCACTGGTCACGTCGGGGTTACCCTTCGACATGTCATCATT
CTCATCCTTCCCAACAACAGCGACGTCGCCTGTCAATTGTGTCGCATTTC
AGGACCCCTACAAGGAGCCTTTCTTCACCTCACCGGAGGGCGACGTGTCT
CTTCAGTCGACCGCATTCAGCGCCCCTCCAGTCGATTGGTCAAGCTTCCC
TCTGTACTCCTCGGAAGTACCAGCCGCGACAAGCACTCAAGCACCTTCCT
ACGCAAGCTTCGATTACAACTCTATGGCACCCGGGTTCCCAGCCCCATCA
TCATCCGGTGACATCTCTGAAGCGGATGAGTTCGCGCCGATCCCTGGCTT
GGGACGTACTGGCAGCGATCTGCACGATCTCAACAGCGTTAGCGAGGGCT
CCGATATCGACCATTTCCGCATCAGCTCGGCGTCGTCCTTCATTGGCCTT
CCTCAGGCACAGCTCTTGGCATCGAATAACCTTGAGTCGATTGACATTGA
CGACTTCCTCAAGTCGGCCAACGAGTCCACCGCGGCGTTAGAGCATCAGC
TCCAGGCCACGATGGGCATGGAAGCCAAGCAACTTCCCACCGAGGACGCC
TTCGCCATGTCGAATGCTGAGACTTTCAAGCCGGTGACTACACCGACTGC
CAGCATGTCGATGACCACGCCTCCGACCGAAGCCGCTTGGAACGTGGGGC
TCTTCGACCCCAATACTGCCCCCATGAGCGAAAACAGCAATGGCAATTTC
TACGTGCCGCCATGGGTGCAGTAA
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Coding sequence (CDS) from alignment at An11:686515..688238+

>CBS51388_006728-T1 ID=CBS51388_006728-T1|Name=CBS51388_006728-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4788bp|location=Sequence derived from alignment at An11:686515..688238+ (Aspergillus niger CBS 513.88)
ATGCTTATCGATGGCGAGAAGTGGGCTTGTGAAGCTTGCGTCCGGGGTCA
CCGTGTCAGCAGCTGTCACCACAGTGACCGCCCCTTGACCCACATTAACA
AAAAAGGCCGTCCTGTCTCCCAATGCGCTCACTGTCGCGGCCTACGCAAG
TCACGGACAACCCACACTAAGTGCGAGTGTGGTGACAAGAAAAAGAATTG
CCACAAGAATGACTTAGATCCCCATGCTACGGATAAGCGGGATCACAAGC
AGGACTCCCGTCCAAAATGTGGCTGCACTCATGGTCAGCGCTGTACCTGT
GCGCTGAAGAAGGAACCCCACCTGGATACCGTTCCGGAGACCGGCCTCCC
TCCACCCCCAGCTGCGACGCTGTTGGATCAGCCCAAGAAGCCGCAGCTGA
CCTCGACCAAATCGGAGAGTACCTTGACCATCTTCCGCGATGGCCACCAC
AAGCCGGCTCATAAGCACAACGACATGGCTCATAAATGCGGTCTGCCCTA
TACGATACCCCGTTCTCATACCATCCATGCTGGCGATGTGGCCCGCCGCT
CGGTCGACCACCTGCCTTTGGTCCAGCCCACCATGCTCAACGAGGGTTTC
GCGAATCAACAACAGCCCGCAGAACAGTCACCTTCGCGCGGACAACATCG
CCGTGTCAAGTCTGAACATGGTTCTCCTGAGAGTGCCCCCGTCGTCTCGC
CGGACAACGTCCCGACAACCGTTCCCCCACTCGACATCTCGTCCTTTTTC
CCTCAAGTTCAGACAGCGGAGAACGCTGGTGACGTTGGCGTTCCCGAGCC
GGTCTCGATGCCTATGAAGACCCCTCTGGACCCACTGGTCACGTCGGGGT
TACCCTTCGACATGTCATCATTCTCATCCTTCCCAACAACAGCGACGTCG
CCTGTCAATTGTGTCGCATTTCAGGACCCCTACAAGGAGCCTTTCTTCAC
CTCACCGGAGGGCGACGTGTCTCTTCAGTCGACCGCATTCAGCGCCCCTC
CAGTCGATTGGTCAAGCTTCCCTCTGTACTCCTCGGAAGTACCAGCCGCG
ACAAGCACTCAAGCACCTTCCTACGCAAGCTTCGATTACAACTCTATGGC
ACCCGGGTTCCCAGCCCCATCATCATCCGGTGACATCTCTGAAGCGGATG
AGTTCGCGCCGATCCCTGGCTTGGGACGTACTGGCAGCGATCTGCACGAT
CTCAACAGCGTTAGCGAGGGCTCCGATATCGACCATTTCCGCATCAGCTC
GGCGTCGTCCTTCATTGGCCTTCCTCAGGCACAGCTCTTGGCATCGAATA
ACCTTGAGTCGATTGACATTGACGACTTCCTCAAGTCGGCCAACGAGTCC
ACCGCGGCGTTAGAGCATCAGCTCCAGGCCACGATGGGCATGGAAGCCAA
GCAACTTCCCACCGAGGACGCCTTCGCCATGTCGAATGCTGAGACTTTCA
AGCCGGTGACTACACCGACTGCCAGCATGTCGATGACCACGCCTCCGACC
GAAGCCGCTTGGAACGTGGGGCTCTTCGACCCCAATACTGCCCCCATGAG
CGAAAACAGCAATGGCAATTTCTACGTGCCGCCATGGGTGCAGTAAATGC
TTATCGATGGCGAGAAGTGGGCTTGTGAAGCTTGCGTCCGGGGTCACCGT
GTCAGCAGCTGTCACCACAGTGACCGCCCCTTGACCCACATTAACAAAAA
AGGCCGTCCTGTCTCCCAATGCGCTCACTGTCGCGGCCTACGCAAGTCAC
GGACAACCCACACTAAGTGCGAGTGTGGTGACAAGAAAAAGAATTGCCAC
AAGAATGACTTAGATCCCCATGCTACGGATAAGCGGGATCACAAGCAGGA
CTCCCGTCCAAAATGTGGCTGCACTCATGGTCAGCGCTGTACCTGTGCGC
TGAAGAAGGAACCCCACCTGGATACCGTTCCGGAGACCGGCCTCCCTCCA
CCCCCAGCTGCGACGCTGTTGGATCAGCCCAAGAAGCCGCAGCTGACCTC
GACCAAATCGGAGAGTACCTTGACCATCTTCCGCGATGGCCACCACAAGC
CGGCTCATAAGCACAACGACATGGCTCATAAATGCGGTCTGCCCTATACG
ATACCCCGTTCTCATACCATCCATGCTGGCGATGTGGCCCGCCGCTCGGT
CGACCACCTGCCTTTGGTCCAGCCCACCATGCTCAACGAGGGTTTCGCGA
ATCAACAACAGCCCGCAGAACAGTCACCTTCGCGCGGACAACATCGCCGT
GTCAAGTCTGAACATGGTTCTCCTGAGAGTGCCCCCGTCGTCTCGCCGGA
CAACGTCCCGACAACCGTTCCCCCACTCGACATCTCGTCCTTTTTCCCTC
AAGTTCAGACAGCGGAGAACGCTGGTGACGTTGGCGTTCCCGAGCCGGTC
TCGATGCCTATGAAGACCCCTCTGGACCCACTGGTCACGTCGGGGTTACC
CTTCGACATGTCATCATTCTCATCCTTCCCAACAACAGCGACGTCGCCTG
TCAATTGTGTCGCATTTCAGGACCCCTACAAGGAGCCTTTCTTCACCTCA
CCGGAGGGCGACGTGTCTCTTCAGTCGACCGCATTCAGCGCCCCTCCAGT
CGATTGGTCAAGCTTCCCTCTGTACTCCTCGGAAGTACCAGCCGCGACAA
GCACTCAAGCACCTTCCTACGCAAGCTTCGATTACAACTCTATGGCACCC
GGGTTCCCAGCCCCATCATCATCCGGTGACATCTCTGAAGCGGATGAGTT
CGCGCCGATCCCTGGCTTGGGACGTACTGGCAGCGATCTGCACGATCTCA
ACAGCGTTAGCGAGGGCTCCGATATCGACCATTTCCGCATCAGCTCGGCG
TCGTCCTTCATTGGCCTTCCTCAGGCACAGCTCTTGGCATCGAATAACCT
TGAGTCGATTGACATTGACGACTTCCTCAAGTCGGCCAACGAGTCCACCG
CGGCGTTAGAGCATCAGCTCCAGGCCACGATGGGCATGGAAGCCAAGCAA
CTTCCCACCGAGGACGCCTTCGCCATGTCGAATGCTGAGACTTTCAAGCC
GGTGACTACACCGACTGCCAGCATGTCGATGACCACGCCTCCGACCGAAG
CCGCTTGGAACGTGGGGCTCTTCGACCCCAATACTGCCCCCATGAGCGAA
AACAGCAATGGCAATTTCTACGTGCCGCCATGGGTGCAGTAAATGCTTAT
CGATGGCGAGAAGTGGGCTTGTGAAGCTTGCGTCCGGGGTCACCGTGTCA
GCAGCTGTCACCACAGTGACCGCCCCTTGACCCACATTAACAAAAAAGGC
CGTCCTGTCTCCCAATGCGCTCACTGTCGCGGCCTACGCAAGTCACGGAC
AACCCACACTAAGTGCGAGTGTGGTGACAAGAAAAAGAATTGCCACAAGA
ATGACTTAGATCCCCATGCTACGGATAAGCGGGATCACAAGCAGGACTCC
CGTCCAAAATGTGGCTGCACTCATGGTCAGCGCTGTACCTGTGCGCTGAA
GAAGGAACCCCACCTGGATACCGTTCCGGAGACCGGCCTCCCTCCACCCC
CAGCTGCGACGCTGTTGGATCAGCCCAAGAAGCCGCAGCTGACCTCGACC
AAATCGGAGAGTACCTTGACCATCTTCCGCGATGGCCACCACAAGCCGGC
TCATAAGCACAACGACATGGCTCATAAATGCGGTCTGCCCTATACGATAC
CCCGTTCTCATACCATCCATGCTGGCGATGTGGCCCGCCGCTCGGTCGAC
CACCTGCCTTTGGTCCAGCCCACCATGCTCAACGAGGGTTTCGCGAATCA
ACAACAGCCCGCAGAACAGTCACCTTCGCGCGGACAACATCGCCGTGTCA
AGTCTGAACATGGTTCTCCTGAGAGTGCCCCCGTCGTCTCGCCGGACAAC
GTCCCGACAACCGTTCCCCCACTCGACATCTCGTCCTTTTTCCCTCAAGT
TCAGACAGCGGAGAACGCTGGTGACGTTGGCGTTCCCGAGCCGGTCTCGA
TGCCTATGAAGACCCCTCTGGACCCACTGGTCACGTCGGGGTTACCCTTC
GACATGTCATCATTCTCATCCTTCCCAACAACAGCGACGTCGCCTGTCAA
TTGTGTCGCATTTCAGGACCCCTACAAGGAGCCTTTCTTCACCTCACCGG
AGGGCGACGTGTCTCTTCAGTCGACCGCATTCAGCGCCCCTCCAGTCGAT
TGGTCAAGCTTCCCTCTGTACTCCTCGGAAGTACCAGCCGCGACAAGCAC
TCAAGCACCTTCCTACGCAAGCTTCGATTACAACTCTATGGCACCCGGGT
TCCCAGCCCCATCATCATCCGGTGACATCTCTGAAGCGGATGAGTTCGCG
CCGATCCCTGGCTTGGGACGTACTGGCAGCGATCTGCACGATCTCAACAG
CGTTAGCGAGGGCTCCGATATCGACCATTTCCGCATCAGCTCGGCGTCGT
CCTTCATTGGCCTTCCTCAGGCACAGCTCTTGGCATCGAATAACCTTGAG
TCGATTGACATTGACGACTTCCTCAAGTCGGCCAACGAGTCCACCGCGGC
GTTAGAGCATCAGCTCCAGGCCACGATGGGCATGGAAGCCAAGCAACTTC
CCACCGAGGACGCCTTCGCCATGTCGAATGCTGAGACTTTCAAGCCGGTG
ACTACACCGACTGCCAGCATGTCGATGACCACGCCTCCGACCGAAGCCGC
TTGGAACGTGGGGCTCTTCGACCCCAATACTGCCCCCATGAGCGAAAACA
GCAATGGCAATTTCTACGTGCCGCCATGGGTGCAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0003677DNA binding
GO:0005507copper ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006728CBS51388_006728Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006728-T1.exon1CBS51388_006728-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006728-T1.exon2CBS51388_006728-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006728-T1.exon3CBS51388_006728-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006728-T1.cdsCBS51388_006728-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006728-T1CBS51388_006728-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036395
DBxrefInterPro:IPR001083
DBxrefPFAM:PF00649
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:686515..688238 +
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