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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:695781..696745+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006729-T1 ID=CBS51388_006729-T1|Name=CBS51388_006729-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=965bp|location=Sequence derived from alignment at An11:695781..696745+ (Aspergillus niger CBS 513.88)
ATGCGTTTCTTGAACATTGTTATCTCGATGATGGCGTTCGCCGTTACAGC
GCTGGGTACGTGTTCCCTTGATTCTGGATCATCTGCTCTGGACTAACATC
AGCATGTCTAGCCATCACCATCACCCAGCCTCAAAATGGCGACCAGGTGG
ACTTCAGCAAGCCCTACACCATTAAGTGGACGACTGTGGCGTAAGTGAAC
ACGGGCTCATTGACGGTTACACACAACTAAATCATGTCTTCGGATCAGAT
CTGACCCTTCGAACTTCACCATCATGCTGGTCAACATGAACAGCCAGCCC
ACCGTCAGCAAAAAGATCGCCAATGTCAAGACATCGGATAGCAAATACAC
CGTTGACAAGGTCGTCGGAATTCCGGTTGCGTATGTATCTTCAAGCGGCC
CAGCCGCCTTGTTATGGCATATGTCGTACGACCCTAACAAATGCGCATAG
TAATGGCTACCAACTCAACGCCGAATCCAATACCACCCATAACACCGGCA
TCCTGAGCCAGTCGCAGCAGTTCAATGTGACCAAGGTTGGCAAGGCTGAA
ACAAGTAAGGAAAATTCTATTTTATCATCATCATCATCATCATCATCATC
ATCATCATCACAATTATCATCATCTTCACCATCACCATCACCATGTATCC
GCCCACGTACCAGCACCACCATCACAAAAACCACTTCCCGCCCCTGCATC
AACCACCAGACTACTTCACCACCATCTAGCACCACTCCCTCCGCCTCCAA
AACACCGGGTGAGTACGTACAGGATGTGAAGTAGACGGGTCTCTAACCGT
GTTCTCTTTGCCTTACCTACAGCTTCAGCCACCACCAGCGCCACCCACAC
AGCTGCTGCGTCTACCTCCTCATCTGCCGGATCTGCCGCGTACACGGGCA
CGCTTCCTGGCTCCGCCGCCGTGATCGGTGCGCTCGCAATGGGCGTAATT
GCCGAGATTCTGTAA back to topCoding sequence (CDS) from alignment at An11:695781..696745+ >CBS51388_006729-T1 ID=CBS51388_006729-T1|Name=CBS51388_006729-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3585bp|location=Sequence derived from alignment at An11:695781..696745+ (Aspergillus niger CBS 513.88)
ATGCGTTTCTTGAACATTGTTATCTCGATGATGGCGTTCGCCGTTACAGC
GCTGGCCATCACCATCACCCAGCCTCAAAATGGCGACCAGGTGGACTTCA
GCAAGCCCTACACCATTAAGTGGACGACTGTGGCATCTGACCCTTCGAAC
TTCACCATCATGCTGGTCAACATGAACAGCCAGCCCACCGTCAGCAAAAA
GATCGCCAATGTCAAGACATCGGATAGCAAATACACCGTTGACAAGGTCG
TCGGAATTCCGGTTGCTAATGGCTACCAACTCAACGCCGAATCCAATACC
ACCCATAACACCGGCATCCTGAGCCAGTCGCAGCAGTTCAATGTGACCAA
GGTTGGCAAGGCTGAAACAAGTAAGGAAAATTCTATTTTATCATCATCAT
CATCATCATCATCATCATCATCATCACAATTATCATCATCTTCACCATCA
CCATCACCATGTATCCGCCCACGTACCAGCACCACCATCACAAAAACCAC
TTCCCGCCCCTGCATCAACCACCAGACTACTTCACCACCATCTAGCACCA
CTCCCTCCGCCTCCAAAACACCGGCTTCAGCCACCACCAGCGCCACCCAC
ACAGCTGCTGCGTCTACCTCCTCATCTGCCGGATCTGCCGCGTACACGGG
CACGCTTCCTGGCTCCGCCGCCGTGATCGGTGCGCTCGCAATGGGCGTAA
TTGCCGAGATTCTGTAAATGCGTTTCTTGAACATTGTTATCTCGATGATG
GCGTTCGCCGTTACAGCGCTGGCCATCACCATCACCCAGCCTCAAAATGG
CGACCAGGTGGACTTCAGCAAGCCCTACACCATTAAGTGGACGACTGTGG
CATCTGACCCTTCGAACTTCACCATCATGCTGGTCAACATGAACAGCCAG
CCCACCGTCAGCAAAAAGATCGCCAATGTCAAGACATCGGATAGCAAATA
CACCGTTGACAAGGTCGTCGGAATTCCGGTTGCTAATGGCTACCAACTCA
ACGCCGAATCCAATACCACCCATAACACCGGCATCCTGAGCCAGTCGCAG
CAGTTCAATGTGACCAAGGTTGGCAAGGCTGAAACAAGTAAGGAAAATTC
TATTTTATCATCATCATCATCATCATCATCATCATCATCATCACAATTAT
CATCATCTTCACCATCACCATCACCATGTATCCGCCCACGTACCAGCACC
ACCATCACAAAAACCACTTCCCGCCCCTGCATCAACCACCAGACTACTTC
ACCACCATCTAGCACCACTCCCTCCGCCTCCAAAACACCGGCTTCAGCCA
CCACCAGCGCCACCCACACAGCTGCTGCGTCTACCTCCTCATCTGCCGGA
TCTGCCGCGTACACGGGCACGCTTCCTGGCTCCGCCGCCGTGATCGGTGC
GCTCGCAATGGGCGTAATTGCCGAGATTCTGTAAATGCGTTTCTTGAACA
TTGTTATCTCGATGATGGCGTTCGCCGTTACAGCGCTGGCCATCACCATC
ACCCAGCCTCAAAATGGCGACCAGGTGGACTTCAGCAAGCCCTACACCAT
TAAGTGGACGACTGTGGCATCTGACCCTTCGAACTTCACCATCATGCTGG
TCAACATGAACAGCCAGCCCACCGTCAGCAAAAAGATCGCCAATGTCAAG
ACATCGGATAGCAAATACACCGTTGACAAGGTCGTCGGAATTCCGGTTGC
TAATGGCTACCAACTCAACGCCGAATCCAATACCACCCATAACACCGGCA
TCCTGAGCCAGTCGCAGCAGTTCAATGTGACCAAGGTTGGCAAGGCTGAA
ACAAGTAAGGAAAATTCTATTTTATCATCATCATCATCATCATCATCATC
ATCATCATCACAATTATCATCATCTTCACCATCACCATCACCATGTATCC
GCCCACGTACCAGCACCACCATCACAAAAACCACTTCCCGCCCCTGCATC
AACCACCAGACTACTTCACCACCATCTAGCACCACTCCCTCCGCCTCCAA
AACACCGGCTTCAGCCACCACCAGCGCCACCCACACAGCTGCTGCGTCTA
CCTCCTCATCTGCCGGATCTGCCGCGTACACGGGCACGCTTCCTGGCTCC
GCCGCCGTGATCGGTGCGCTCGCAATGGGCGTAATTGCCGAGATTCTGTA
AATGCGTTTCTTGAACATTGTTATCTCGATGATGGCGTTCGCCGTTACAG
CGCTGGCCATCACCATCACCCAGCCTCAAAATGGCGACCAGGTGGACTTC
AGCAAGCCCTACACCATTAAGTGGACGACTGTGGCATCTGACCCTTCGAA
CTTCACCATCATGCTGGTCAACATGAACAGCCAGCCCACCGTCAGCAAAA
AGATCGCCAATGTCAAGACATCGGATAGCAAATACACCGTTGACAAGGTC
GTCGGAATTCCGGTTGCTAATGGCTACCAACTCAACGCCGAATCCAATAC
CACCCATAACACCGGCATCCTGAGCCAGTCGCAGCAGTTCAATGTGACCA
AGGTTGGCAAGGCTGAAACAAGTAAGGAAAATTCTATTTTATCATCATCA
TCATCATCATCATCATCATCATCATCACAATTATCATCATCTTCACCATC
ACCATCACCATGTATCCGCCCACGTACCAGCACCACCATCACAAAAACCA
CTTCCCGCCCCTGCATCAACCACCAGACTACTTCACCACCATCTAGCACC
ACTCCCTCCGCCTCCAAAACACCGGCTTCAGCCACCACCAGCGCCACCCA
CACAGCTGCTGCGTCTACCTCCTCATCTGCCGGATCTGCCGCGTACACGG
GCACGCTTCCTGGCTCCGCCGCCGTGATCGGTGCGCTCGCAATGGGCGTA
ATTGCCGAGATTCTGTAAATGCGTTTCTTGAACATTGTTATCTCGATGAT
GGCGTTCGCCGTTACAGCGCTGGCCATCACCATCACCCAGCCTCAAAATG
GCGACCAGGTGGACTTCAGCAAGCCCTACACCATTAAGTGGACGACTGTG
GCATCTGACCCTTCGAACTTCACCATCATGCTGGTCAACATGAACAGCCA
GCCCACCGTCAGCAAAAAGATCGCCAATGTCAAGACATCGGATAGCAAAT
ACACCGTTGACAAGGTCGTCGGAATTCCGGTTGCTAATGGCTACCAACTC
AACGCCGAATCCAATACCACCCATAACACCGGCATCCTGAGCCAGTCGCA
GCAGTTCAATGTGACCAAGGTTGGCAAGGCTGAAACAAGTAAGGAAAATT
CTATTTTATCATCATCATCATCATCATCATCATCATCATCATCACAATTA
TCATCATCTTCACCATCACCATCACCATGTATCCGCCCACGTACCAGCAC
CACCATCACAAAAACCACTTCCCGCCCCTGCATCAACCACCAGACTACTT
CACCACCATCTAGCACCACTCCCTCCGCCTCCAAAACACCGGCTTCAGCC
ACCACCAGCGCCACCCACACAGCTGCTGCGTCTACCTCCTCATCTGCCGG
ATCTGCCGCGTACACGGGCACGCTTCCTGGCTCCGCCGCCGTGATCGGTG
CGCTCGCAATGGGCGTAATTGCCGAGATTCTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| DBxref | InterPro:IPR018466 |
| DBxref | PFAM:PF10342 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:695781..696745 + |
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