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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:698518..700332- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006730-T1 ID=CBS51388_006730-T1|Name=CBS51388_006730-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1815bp|location=Sequence derived from alignment at An11:698518..700332- (Aspergillus niger CBS 513.88)
ATGAATCCCAACCCACTTGCGACCGTTCCGGCGCCTCCGACATCAGGTGT
CAAGCTCTCACTGGTTAGCATCGGTAGCCGGATTAAAACTCCTACACCCT
CCGTGGATGGCGTAGGGGCAGCATCTTTATTTGGGGATGGCAATCCAGCT
CTAGCGGCACCACCTGTCAAGGAAGGATTGAAGAGGAGAAAACCGAAGAA
CAATATCATCAAGAGCAGCTCGTCATTCGTCTCGCGGGTCATTACGCATG
AGACGGCAACCAAGCGATTGAACGATCGGAATCCGGATGGTCTTTTTGCC
TTTGCCAATATCAATCGTGCCTTCCAGTGGCTGGACCTTAGCGCTAAGCA
GAAGGAAGAGCCCGTCACTAAGATCTTGTTCACCAAAGCGCACATGATAA
GTCATGATATCAATGAGCTAACCAAGAGCACATCGCACATAGATGTTGTC
ATGGGTTCATCGGCTGGAGACATTATATGGTACGAGCCGATGTCTCAAAA
GTACGCACGTATCAACAAGAACGGGGTCGTCAACAACTCTCCTGTGACGC
ATATAAAATGGATCCCCGGTTCAGAGAATCTGTTTATGGCCGCTCATGCC
AACGGACAGTTGGTGGTGTACGACAAGGAGAAAGAAGACGCTCTTTTCGC
ACCAGAACTGGGCAGTCCATCGGCTGAAACGATGAAGTCGTCGTCAGGGC
GATCACCATTGCAAATCCTGAAGTCGGTCAACTCGAGGAACCAGAAGACC
AATCCGGTTGCGCTGTGGAAACTCGCCAACCAAAAAATCACGCAATTCGC
CTTCTCTCCGGACCGCAGACACTTGGCTGTCGTCTTAGAAGATGGATCGT
TACGAGTGATGGACTACTTGAAGGAAGAGTATGCTGCGACTGCTATTTCG
CCACCTTGTCGGTATAGGAAAGGGTGGGCTAACGTCTTGCTAGGGTTCTG
GATATCTTCCGCAGTTACTACGGCGGATTAATATGCGTCTGCTGGTCGCC
AGACGGAAAATACATAGTAACTGGAGGCCAAGACGATCTTGTAACGATCT
GGTCGTTGCCAGAGCGCAAGATCGTCGCACGCTGCCAGGGCCACAACTCC
TGGGTCTCTGCGGTAGCTTTTGACCCATGGCGCTGCGACGACCGCACTTA
CAGGTTTGGTAGCGTTGGTGACGATTGTCGGTTGCTGCTATGGGATTTCA
GCGTGGGCATGCTGCACCGGCCGAGAGTAGTACGTTTACCAACAATGATA
CGGATCCCTAGTGTTCTAACCCTTAAAACAGCATCAAGCCAACGCCCGCC
AACGCACCAGCATGATCGTCTCGAACACTCAACATCTCAACCGCCACCGA
GCAGACAGCGGAGGTAACCGAACGCGGTCTGATTCTCAGGAGACCGCAGA
TACCTATAACAGTTATGATCCGACCGTTCGTCATCCGGTGGAACCCAGAG
CACGAACTGCCCTCTTACCACCGATCATGGTACCTCCCACCCCGTCCAGC
CTGTTCCGCAAGTTTCAGCAAGGCTAACTAACTCGCGCAGTCCAAAATCG
TAGGCGAAGACCCTATCTGCTGGTTAGGCTTCCAAGAAGACTCCATCATG
ACATCTTCACTCGAAGGTATTTCGCAGCCCGAACCCCTTTACGCAGAATT
GTTCCTTAGAATATTGCTAACGACTTTATCTTCAATCAACCAGGCCACAT
TCGTACCTGGGATCGTCCCCGAGAAGGCATTAACGACAACTACAGTTATT
CGCCGGCGATCAGTGCCAGCGCCACCGGGTCTGGTCGTGCTGACTCGATG
ATGGGATCACTGTGA back to topCoding sequence (CDS) from alignment at An11:698518..700332- >CBS51388_006730-T1 ID=CBS51388_006730-T1|Name=CBS51388_006730-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7800bp|location=Sequence derived from alignment at An11:698518..700332- (Aspergillus niger CBS 513.88)
GCCACATTCGTACCTGGGATCGTCCCCGAGAAGGCATTAACGACAACTAC
AGTTATTCGCCGGCGATCAGTGCCAGCGCCACCGGGTCTGGTCGTGCTGA
CTCGATGATGGGATCACTGTGATCCAAAATCGTAGGCGAAGACCCTATCT
GCTGGTTAGGCTTCCAAGAAGACTCCATCATGACATCTTCACTCGAAGCA
TCAAGCCAACGCCCGCCAACGCACCAGCATGATCGTCTCGAACACTCAAC
ATCTCAACCGCCACCGAGCAGACAGCGGAGGTAACCGAACGCGGTCTGAT
TCTCAGGAGACCGCAGATACCTATAACAGTTATGATCCGACCGTTCGTCA
TCCGGTGGAACCCAGAGCACGAACTGCCCTCTTACCACCGATCATGGGTT
CTGGATATCTTCCGCAGTTACTACGGCGGATTAATATGCGTCTGCTGGTC
GCCAGACGGAAAATACATAGTAACTGGAGGCCAAGACGATCTTGTAACGA
TCTGGTCGTTGCCAGAGCGCAAGATCGTCGCACGCTGCCAGGGCCACAAC
TCCTGGGTCTCTGCGGTAGCTTTTGACCCATGGCGCTGCGACGACCGCAC
TTACAGGTTTGGTAGCGTTGGTGACGATTGTCGGTTGCTGCTATGGGATT
TCAGCGTGGGCATGCTGCACCGGCCGAGAGTAATGAATCCCAACCCACTT
GCGACCGTTCCGGCGCCTCCGACATCAGGTGTCAAGCTCTCACTGGTTAG
CATCGGTAGCCGGATTAAAACTCCTACACCCTCCGTGGATGGCGTAGGGG
CAGCATCTTTATTTGGGGATGGCAATCCAGCTCTAGCGGCACCACCTGTC
AAGGAAGGATTGAAGAGGAGAAAACCGAAGAACAATATCATCAAGAGCAG
CTCGTCATTCGTCTCGCGGGTCATTACGCATGAGACGGCAACCAAGCGAT
TGAACGATCGGAATCCGGATGGTCTTTTTGCCTTTGCCAATATCAATCGT
GCCTTCCAGTGGCTGGACCTTAGCGCTAAGCAGAAGGAAGAGCCCGTCAC
TAAGATCTTGTTCACCAAAGCGCACATGATAAGTCATGATATCAATGAGC
TAACCAAGAGCACATCGCACATAGATGTTGTCATGGGTTCATCGGCTGGA
GACATTATATGGTACGAGCCGATGTCTCAAAAGTACGCACGTATCAACAA
GAACGGGGTCGTCAACAACTCTCCTGTGACGCATATAAAATGGATCCCCG
GTTCAGAGAATCTGTTTATGGCCGCTCATGCCAACGGACAGTTGGTGGTG
TACGACAAGGAGAAAGAAGACGCTCTTTTCGCACCAGAACTGGGCAGTCC
ATCGGCTGAAACGATGAAGTCGTCGTCAGGGCGATCACCATTGCAAATCC
TGAAGTCGGTCAACTCGAGGAACCAGAAGACCAATCCGGTTGCGCTGTGG
AAACTCGCCAACCAAAAAATCACGCAATTCGCCTTCTCTCCGGACCGCAG
ACACTTGGCTGTCGTCTTAGAAGATGGATCGTTACGAGTGATGGACTACT
TGAAGGAAGAGCCACATTCGTACCTGGGATCGTCCCCGAGAAGGCATTAA
CGACAACTACAGTTATTCGCCGGCGATCAGTGCCAGCGCCACCGGGTCTG
GTCGTGCTGACTCGATGATGGGATCACTGTGATCCAAAATCGTAGGCGAA
GACCCTATCTGCTGGTTAGGCTTCCAAGAAGACTCCATCATGACATCTTC
ACTCGAAGCATCAAGCCAACGCCCGCCAACGCACCAGCATGATCGTCTCG
AACACTCAACATCTCAACCGCCACCGAGCAGACAGCGGAGGTAACCGAAC
GCGGTCTGATTCTCAGGAGACCGCAGATACCTATAACAGTTATGATCCGA
CCGTTCGTCATCCGGTGGAACCCAGAGCACGAACTGCCCTCTTACCACCG
ATCATGGGTTCTGGATATCTTCCGCAGTTACTACGGCGGATTAATATGCG
TCTGCTGGTCGCCAGACGGAAAATACATAGTAACTGGAGGCCAAGACGAT
CTTGTAACGATCTGGTCGTTGCCAGAGCGCAAGATCGTCGCACGCTGCCA
GGGCCACAACTCCTGGGTCTCTGCGGTAGCTTTTGACCCATGGCGCTGCG
ACGACCGCACTTACAGGTTTGGTAGCGTTGGTGACGATTGTCGGTTGCTG
CTATGGGATTTCAGCGTGGGCATGCTGCACCGGCCGAGAGTAATGAATCC
CAACCCACTTGCGACCGTTCCGGCGCCTCCGACATCAGGTGTCAAGCTCT
CACTGGTTAGCATCGGTAGCCGGATTAAAACTCCTACACCCTCCGTGGAT
GGCGTAGGGGCAGCATCTTTATTTGGGGATGGCAATCCAGCTCTAGCGGC
ACCACCTGTCAAGGAAGGATTGAAGAGGAGAAAACCGAAGAACAATATCA
TCAAGAGCAGCTCGTCATTCGTCTCGCGGGTCATTACGCATGAGACGGCA
ACCAAGCGATTGAACGATCGGAATCCGGATGGTCTTTTTGCCTTTGCCAA
TATCAATCGTGCCTTCCAGTGGCTGGACCTTAGCGCTAAGCAGAAGGAAG
AGCCCGTCACTAAGATCTTGTTCACCAAAGCGCACATGATAAGTCATGAT
ATCAATGAGCTAACCAAGAGCACATCGCACATAGATGTTGTCATGGGTTC
ATCGGCTGGAGACATTATATGGTACGAGCCGATGTCTCAAAAGTACGCAC
GTATCAACAAGAACGGGGTCGTCAACAACTCTCCTGTGACGCATATAAAA
TGGATCCCCGGTTCAGAGAATCTGTTTATGGCCGCTCATGCCAACGGACA
GTTGGTGGTGTACGACAAGGAGAAAGAAGACGCTCTTTTCGCACCAGAAC
TGGGCAGTCCATCGGCTGAAACGATGAAGTCGTCGTCAGGGCGATCACCA
TTGCAAATCCTGAAGTCGGTCAACTCGAGGAACCAGAAGACCAATCCGGT
TGCGCTGTGGAAACTCGCCAACCAAAAAATCACGCAATTCGCCTTCTCTC
CGGACCGCAGACACTTGGCTGTCGTCTTAGAAGATGGATCGTTACGAGTG
ATGGACTACTTGAAGGAAGAGCCACATTCGTACCTGGGATCGTCCCCGAG
AAGGCATTAACGACAACTACAGTTATTCGCCGGCGATCAGTGCCAGCGCC
ACCGGGTCTGGTCGTGCTGACTCGATGATGGGATCACTGTGATCCAAAAT
CGTAGGCGAAGACCCTATCTGCTGGTTAGGCTTCCAAGAAGACTCCATCA
TGACATCTTCACTCGAAGCATCAAGCCAACGCCCGCCAACGCACCAGCAT
GATCGTCTCGAACACTCAACATCTCAACCGCCACCGAGCAGACAGCGGAG
GTAACCGAACGCGGTCTGATTCTCAGGAGACCGCAGATACCTATAACAGT
TATGATCCGACCGTTCGTCATCCGGTGGAACCCAGAGCACGAACTGCCCT
CTTACCACCGATCATGGGTTCTGGATATCTTCCGCAGTTACTACGGCGGA
TTAATATGCGTCTGCTGGTCGCCAGACGGAAAATACATAGTAACTGGAGG
CCAAGACGATCTTGTAACGATCTGGTCGTTGCCAGAGCGCAAGATCGTCG
CACGCTGCCAGGGCCACAACTCCTGGGTCTCTGCGGTAGCTTTTGACCCA
TGGCGCTGCGACGACCGCACTTACAGGTTTGGTAGCGTTGGTGACGATTG
TCGGTTGCTGCTATGGGATTTCAGCGTGGGCATGCTGCACCGGCCGAGAG
TAATGAATCCCAACCCACTTGCGACCGTTCCGGCGCCTCCGACATCAGGT
GTCAAGCTCTCACTGGTTAGCATCGGTAGCCGGATTAAAACTCCTACACC
CTCCGTGGATGGCGTAGGGGCAGCATCTTTATTTGGGGATGGCAATCCAG
CTCTAGCGGCACCACCTGTCAAGGAAGGATTGAAGAGGAGAAAACCGAAG
AACAATATCATCAAGAGCAGCTCGTCATTCGTCTCGCGGGTCATTACGCA
TGAGACGGCAACCAAGCGATTGAACGATCGGAATCCGGATGGTCTTTTTG
CCTTTGCCAATATCAATCGTGCCTTCCAGTGGCTGGACCTTAGCGCTAAG
CAGAAGGAAGAGCCCGTCACTAAGATCTTGTTCACCAAAGCGCACATGAT
AAGTCATGATATCAATGAGCTAACCAAGAGCACATCGCACATAGATGTTG
TCATGGGTTCATCGGCTGGAGACATTATATGGTACGAGCCGATGTCTCAA
AAGTACGCACGTATCAACAAGAACGGGGTCGTCAACAACTCTCCTGTGAC
GCATATAAAATGGATCCCCGGTTCAGAGAATCTGTTTATGGCCGCTCATG
CCAACGGACAGTTGGTGGTGTACGACAAGGAGAAAGAAGACGCTCTTTTC
GCACCAGAACTGGGCAGTCCATCGGCTGAAACGATGAAGTCGTCGTCAGG
GCGATCACCATTGCAAATCCTGAAGTCGGTCAACTCGAGGAACCAGAAGA
CCAATCCGGTTGCGCTGTGGAAACTCGCCAACCAAAAAATCACGCAATTC
GCCTTCTCTCCGGACCGCAGACACTTGGCTGTCGTCTTAGAAGATGGATC
GTTACGAGTGATGGACTACTTGAAGGAAGAGCCACATTCGTACCTGGGAT
CGTCCCCGAGAAGGCATTAACGACAACTACAGTTATTCGCCGGCGATCAG
TGCCAGCGCCACCGGGTCTGGTCGTGCTGACTCGATGATGGGATCACTGT
GATCCAAAATCGTAGGCGAAGACCCTATCTGCTGGTTAGGCTTCCAAGAA
GACTCCATCATGACATCTTCACTCGAAGCATCAAGCCAACGCCCGCCAAC
GCACCAGCATGATCGTCTCGAACACTCAACATCTCAACCGCCACCGAGCA
GACAGCGGAGGTAACCGAACGCGGTCTGATTCTCAGGAGACCGCAGATAC
CTATAACAGTTATGATCCGACCGTTCGTCATCCGGTGGAACCCAGAGCAC
GAACTGCCCTCTTACCACCGATCATGGGTTCTGGATATCTTCCGCAGTTA
CTACGGCGGATTAATATGCGTCTGCTGGTCGCCAGACGGAAAATACATAG
TAACTGGAGGCCAAGACGATCTTGTAACGATCTGGTCGTTGCCAGAGCGC
AAGATCGTCGCACGCTGCCAGGGCCACAACTCCTGGGTCTCTGCGGTAGC
TTTTGACCCATGGCGCTGCGACGACCGCACTTACAGGTTTGGTAGCGTTG
GTGACGATTGTCGGTTGCTGCTATGGGATTTCAGCGTGGGCATGCTGCAC
CGGCCGAGAGTAATGAATCCCAACCCACTTGCGACCGTTCCGGCGCCTCC
GACATCAGGTGTCAAGCTCTCACTGGTTAGCATCGGTAGCCGGATTAAAA
CTCCTACACCCTCCGTGGATGGCGTAGGGGCAGCATCTTTATTTGGGGAT
GGCAATCCAGCTCTAGCGGCACCACCTGTCAAGGAAGGATTGAAGAGGAG
AAAACCGAAGAACAATATCATCAAGAGCAGCTCGTCATTCGTCTCGCGGG
TCATTACGCATGAGACGGCAACCAAGCGATTGAACGATCGGAATCCGGAT
GGTCTTTTTGCCTTTGCCAATATCAATCGTGCCTTCCAGTGGCTGGACCT
TAGCGCTAAGCAGAAGGAAGAGCCCGTCACTAAGATCTTGTTCACCAAAG
CGCACATGATAAGTCATGATATCAATGAGCTAACCAAGAGCACATCGCAC
ATAGATGTTGTCATGGGTTCATCGGCTGGAGACATTATATGGTACGAGCC
GATGTCTCAAAAGTACGCACGTATCAACAAGAACGGGGTCGTCAACAACT
CTCCTGTGACGCATATAAAATGGATCCCCGGTTCAGAGAATCTGTTTATG
GCCGCTCATGCCAACGGACAGTTGGTGGTGTACGACAAGGAGAAAGAAGA
CGCTCTTTTCGCACCAGAACTGGGCAGTCCATCGGCTGAAACGATGAAGT
CGTCGTCAGGGCGATCACCATTGCAAATCCTGAAGTCGGTCAACTCGAGG
AACCAGAAGACCAATCCGGTTGCGCTGTGGAAACTCGCCAACCAAAAAAT
CACGCAATTCGCCTTCTCTCCGGACCGCAGACACTTGGCTGTCGTCTTAG
AAGATGGATCGTTACGAGTGATGGACTACTTGAAGGAAGAGCCACATTCG
TACCTGGGATCGTCCCCGAGAAGGCATTAACGACAACTACAGTTATTCGC
CGGCGATCAGTGCCAGCGCCACCGGGTCTGGTCGTGCTGACTCGATGATG
GGATCACTGTGATCCAAAATCGTAGGCGAAGACCCTATCTGCTGGTTAGG
CTTCCAAGAAGACTCCATCATGACATCTTCACTCGAAGCATCAAGCCAAC
GCCCGCCAACGCACCAGCATGATCGTCTCGAACACTCAACATCTCAACCG
CCACCGAGCAGACAGCGGAGGTAACCGAACGCGGTCTGATTCTCAGGAGA
CCGCAGATACCTATAACAGTTATGATCCGACCGTTCGTCATCCGGTGGAA
CCCAGAGCACGAACTGCCCTCTTACCACCGATCATGGGTTCTGGATATCT
TCCGCAGTTACTACGGCGGATTAATATGCGTCTGCTGGTCGCCAGACGGA
AAATACATAGTAACTGGAGGCCAAGACGATCTTGTAACGATCTGGTCGTT
GCCAGAGCGCAAGATCGTCGCACGCTGCCAGGGCCACAACTCCTGGGTCT
CTGCGGTAGCTTTTGACCCATGGCGCTGCGACGACCGCACTTACAGGTTT
GGTAGCGTTGGTGACGATTGTCGGTTGCTGCTATGGGATTTCAGCGTGGG
CATGCTGCACCGGCCGAGAGTAATGAATCCCAACCCACTTGCGACCGTTC
CGGCGCCTCCGACATCAGGTGTCAAGCTCTCACTGGTTAGCATCGGTAGC
CGGATTAAAACTCCTACACCCTCCGTGGATGGCGTAGGGGCAGCATCTTT
ATTTGGGGATGGCAATCCAGCTCTAGCGGCACCACCTGTCAAGGAAGGAT
TGAAGAGGAGAAAACCGAAGAACAATATCATCAAGAGCAGCTCGTCATTC
GTCTCGCGGGTCATTACGCATGAGACGGCAACCAAGCGATTGAACGATCG
GAATCCGGATGGTCTTTTTGCCTTTGCCAATATCAATCGTGCCTTCCAGT
GGCTGGACCTTAGCGCTAAGCAGAAGGAAGAGCCCGTCACTAAGATCTTG
TTCACCAAAGCGCACATGATAAGTCATGATATCAATGAGCTAACCAAGAG
CACATCGCACATAGATGTTGTCATGGGTTCATCGGCTGGAGACATTATAT
GGTACGAGCCGATGTCTCAAAAGTACGCACGTATCAACAAGAACGGGGTC
GTCAACAACTCTCCTGTGACGCATATAAAATGGATCCCCGGTTCAGAGAA
TCTGTTTATGGCCGCTCATGCCAACGGACAGTTGGTGGTGTACGACAAGG
AGAAAGAAGACGCTCTTTTCGCACCAGAACTGGGCAGTCCATCGGCTGAA
ACGATGAAGTCGTCGTCAGGGCGATCACCATTGCAAATCCTGAAGTCGGT
CAACTCGAGGAACCAGAAGACCAATCCGGTTGCGCTGTGGAAACTCGCCA
ACCAAAAAATCACGCAATTCGCCTTCTCTCCGGACCGCAGACACTTGGCT
GTCGTCTTAGAAGATGGATCGTTACGAGTGATGGACTACTTGAAGGAAGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:698518..700332 - |
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