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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:725636..727335+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006736-T1 ID=CBS51388_006736-T1|Name=CBS51388_006736-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1700bp|location=Sequence derived from alignment at An11:725636..727335+ (Aspergillus niger CBS 513.88)
ATGTCGACTCCTACCAGTCCCGTGGAGCACAAGCTCCCTCAGCGTTCGGG
GACCGTCACTAGCGCCATGACTCGTCGGACTTCCATGAGTGATGACGAGG
CCATTCCCGGCTCCGATAGCAACGAGGTATGCGATGGGAATAGATTCTCT
GCAATTCTAAGGTAGATGGCTGATGATCTTGCGACTATTCAGACCACGAA
CCTCCTCCTCGAGCGTCTCCGTGCTTGGAAGCACATGTGTGGATATTTGG
AAGATTATGTGTCTGCGACGGCCAAGGTGTCCAAGTCGCAAGCCAAGGAT
TTCGAGAAGGTTTTGAAGGTGCGCTTGGCTACACTGGGCTCCTCTCAAAG
GGTTGAGCGCCTGTTATACTGATACAATGGATTCCTTGCGTGCAGACTGT
GAACGAACCTCTGCGGGAGAGTCATCATTTCTCCCAGAGCGCCGGCGGCG
TTTCTTCTTGGTTTGAGAACATCCGCGCCAACACTCAGGTAATATTCCCA
GTTACACACACAATGACGACATCGGCTCACAGCTGGCTCTAGGGCATGGT
GAACCTGTACCTGGACTCTGAGAGGAACCTCAAGGGTTCCGTGCTTCCGA
CCTTGGAGCGTCTTCACAAGGAAATCAAGGCCAAGTCGAAGGAATTGCAG
AATGGCGCTGCAAAGGGTGCTAAGGCTGTCGACAAGGCTCGTGGCGTCAC
TCAGAAGCACATTGAGCTCCTCGCCCAGCACACGGCTACACTTGACGCTG
CGTCCCATAACAAGATCGACACCGCCCATGATCCTTACATTCTCCGTCGA
GGTGTCACCCACCGCCTGAACAAGCAGGTTATCGAGGAGAACAACAACCG
TCAGGACCTCATCGCCGTGCAGAACAACTTCCAGCAGTTCGAGGCTCATG
TCCTGCAGACCGTTCAGGGCGCTATGGAGCAGTTCGTCGTCTACATGGGC
GGTCAGCTTGACCGTCACCGCGCCATGTACACGGACATTCTGTCCTCGGC
GCAAAAGGTCCCTCCGGATTTCGAATGGGTCAACTTCATGACCAGAAACG
ACCACATCCTCGTCAACCCCGACGCACCGCCGCGCTCCCTCTCCAACATC
ACCTTCCCTAACCAGGAGCACCGCGCCACCAAGCCCTTGATCGAGGGTAC
TCTGGAGCGCAAGTCTCGCGCCATGCTCAAGGGCTACAGCAGCGGCTTCT
ACGTCGTGACACCCGCCCGCTACCTCCACGAGTTCAAGGACAACGACGAT
CTCCGCCGCGACCCCGCTCCCGAACTCTCCCTCTACCTGCCCGACTGCAT
CATTGGCGCCATCGACGGCTCCAAGTTCAGCGTCAAGGGCAAGGACGTCT
CCAGCGGCAAGGTTGGAAATGCCTTCCACACAAACACCGAGCTGAGCTTC
AAGGCCGCCAACTCTAACGAGGCCGAGAAGTGGTGGACCGTCATCAAGGA
CGCCACTCGCGCTCCGACTTTCTCTTCTAGCACCGCCACCTCGCCAACCA
GCCCTGTTGCGGCCGAGAGCTCTCAGCCGCCCGCCTATGTCGAGAAGGAG
TCCGCTGCTGCTCAGCAGGAACCCACCGCTCAGTCGCCGGCCACTCCGGC
TGCTGTCTCTCGTACCAACACTAGCGGCTCCGGCACTCTTCCCACCGCTT
CTAGTGCCGCGGCACCTCCTGTGACCACTGCTACGGAGGATAAGGCGTGA
back to topCoding sequence (CDS) from alignment at An11:725636..727335+ >CBS51388_006736-T1 ID=CBS51388_006736-T1|Name=CBS51388_006736-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6012bp|location=Sequence derived from alignment at An11:725636..727335+ (Aspergillus niger CBS 513.88)
ATGTCGACTCCTACCAGTCCCGTGGAGCACAAGCTCCCTCAGCGTTCGGG
GACCGTCACTAGCGCCATGACTCGTCGGACTTCCATGAGTGATGACGAGG
CCATTCCCGGCTCCGATAGCAACGAGACCACGAACCTCCTCCTCGAGCGT
CTCCGTGCTTGGAAGCACATGTGTGGATATTTGGAAGATTATGTGTCTGC
GACGGCCAAGGTGTCCAAGTCGCAAGCCAAGGATTTCGAGAAGGTTTTGA
AGACTGTGAACGAACCTCTGCGGGAGAGTCATCATTTCTCCCAGAGCGCC
GGCGGCGTTTCTTCTTGGTTTGAGAACATCCGCGCCAACACTCAGGGCAT
GGTGAACCTGTACCTGGACTCTGAGAGGAACCTCAAGGGTTCCGTGCTTC
CGACCTTGGAGCGTCTTCACAAGGAAATCAAGGCCAAGTCGAAGGAATTG
CAGAATGGCGCTGCAAAGGGTGCTAAGGCTGTCGACAAGGCTCGTGGCGT
CACTCAGAAGCACATTGAGCTCCTCGCCCAGCACACGGCTACACTTGACG
CTGCGTCCCATAACAAGATCGACACCGCCCATGATCCTTACATTCTCCGT
CGAGGTGTCACCCACCGCCTGAACAAGCAGGTTATCGAGGAGAACAACAA
CCGTCAGGACCTCATCGCCGTGCAGAACAACTTCCAGCAGTTCGAGGCTC
ATGTCCTGCAGACCGTTCAGGGCGCTATGGAGCAGTTCGTCGTCTACATG
GGCGGTCAGCTTGACCGTCACCGCGCCATGTACACGGACATTCTGTCCTC
GGCGCAAAAGGTCCCTCCGGATTTCGAATGGGTCAACTTCATGACCAGAA
ACGACCACATCCTCGTCAACCCCGACGCACCGCCGCGCTCCCTCTCCAAC
ATCACCTTCCCTAACCAGGAGCACCGCGCCACCAAGCCCTTGATCGAGGG
TACTCTGGAGCGCAAGTCTCGCGCCATGCTCAAGGGCTACAGCAGCGGCT
TCTACGTCGTGACACCCGCCCGCTACCTCCACGAGTTCAAGGACAACGAC
GATCTCCGCCGCGACCCCGCTCCCGAACTCTCCCTCTACCTGCCCGACTG
CATCATTGGCGCCATCGACGGCTCCAAGTTCAGCGTCAAGGGCAAGGACG
TCTCCAGCGGCAAGGTTGGAAATGCCTTCCACACAAACACCGAGCTGAGC
TTCAAGGCCGCCAACTCTAACGAGGCCGAGAAGTGGTGGACCGTCATCAA
GGACGCCACTCGCGCTCCGACTTTCTCTTCTAGCACCGCCACCTCGCCAA
CCAGCCCTGTTGCGGCCGAGAGCTCTCAGCCGCCCGCCTATGTCGAGAAG
GAGTCCGCTGCTGCTCAGCAGGAACCCACCGCTCAGTCGCCGGCCACTCC
GGCTGCTGTCTCTCGTACCAACACTAGCGGCTCCGGCACTCTTCCCACCG
CTTCTAGTGCCGCGGCACCTCCTGTGACCACTGCTACGGAGGATAAGGCG
TGAATGTCGACTCCTACCAGTCCCGTGGAGCACAAGCTCCCTCAGCGTTC
GGGGACCGTCACTAGCGCCATGACTCGTCGGACTTCCATGAGTGATGACG
AGGCCATTCCCGGCTCCGATAGCAACGAGACCACGAACCTCCTCCTCGAG
CGTCTCCGTGCTTGGAAGCACATGTGTGGATATTTGGAAGATTATGTGTC
TGCGACGGCCAAGGTGTCCAAGTCGCAAGCCAAGGATTTCGAGAAGGTTT
TGAAGACTGTGAACGAACCTCTGCGGGAGAGTCATCATTTCTCCCAGAGC
GCCGGCGGCGTTTCTTCTTGGTTTGAGAACATCCGCGCCAACACTCAGGG
CATGGTGAACCTGTACCTGGACTCTGAGAGGAACCTCAAGGGTTCCGTGC
TTCCGACCTTGGAGCGTCTTCACAAGGAAATCAAGGCCAAGTCGAAGGAA
TTGCAGAATGGCGCTGCAAAGGGTGCTAAGGCTGTCGACAAGGCTCGTGG
CGTCACTCAGAAGCACATTGAGCTCCTCGCCCAGCACACGGCTACACTTG
ACGCTGCGTCCCATAACAAGATCGACACCGCCCATGATCCTTACATTCTC
CGTCGAGGTGTCACCCACCGCCTGAACAAGCAGGTTATCGAGGAGAACAA
CAACCGTCAGGACCTCATCGCCGTGCAGAACAACTTCCAGCAGTTCGAGG
CTCATGTCCTGCAGACCGTTCAGGGCGCTATGGAGCAGTTCGTCGTCTAC
ATGGGCGGTCAGCTTGACCGTCACCGCGCCATGTACACGGACATTCTGTC
CTCGGCGCAAAAGGTCCCTCCGGATTTCGAATGGGTCAACTTCATGACCA
GAAACGACCACATCCTCGTCAACCCCGACGCACCGCCGCGCTCCCTCTCC
AACATCACCTTCCCTAACCAGGAGCACCGCGCCACCAAGCCCTTGATCGA
GGGTACTCTGGAGCGCAAGTCTCGCGCCATGCTCAAGGGCTACAGCAGCG
GCTTCTACGTCGTGACACCCGCCCGCTACCTCCACGAGTTCAAGGACAAC
GACGATCTCCGCCGCGACCCCGCTCCCGAACTCTCCCTCTACCTGCCCGA
CTGCATCATTGGCGCCATCGACGGCTCCAAGTTCAGCGTCAAGGGCAAGG
ACGTCTCCAGCGGCAAGGTTGGAAATGCCTTCCACACAAACACCGAGCTG
AGCTTCAAGGCCGCCAACTCTAACGAGGCCGAGAAGTGGTGGACCGTCAT
CAAGGACGCCACTCGCGCTCCGACTTTCTCTTCTAGCACCGCCACCTCGC
CAACCAGCCCTGTTGCGGCCGAGAGCTCTCAGCCGCCCGCCTATGTCGAG
AAGGAGTCCGCTGCTGCTCAGCAGGAACCCACCGCTCAGTCGCCGGCCAC
TCCGGCTGCTGTCTCTCGTACCAACACTAGCGGCTCCGGCACTCTTCCCA
CCGCTTCTAGTGCCGCGGCACCTCCTGTGACCACTGCTACGGAGGATAAG
GCGTGAATGTCGACTCCTACCAGTCCCGTGGAGCACAAGCTCCCTCAGCG
TTCGGGGACCGTCACTAGCGCCATGACTCGTCGGACTTCCATGAGTGATG
ACGAGGCCATTCCCGGCTCCGATAGCAACGAGACCACGAACCTCCTCCTC
GAGCGTCTCCGTGCTTGGAAGCACATGTGTGGATATTTGGAAGATTATGT
GTCTGCGACGGCCAAGGTGTCCAAGTCGCAAGCCAAGGATTTCGAGAAGG
TTTTGAAGACTGTGAACGAACCTCTGCGGGAGAGTCATCATTTCTCCCAG
AGCGCCGGCGGCGTTTCTTCTTGGTTTGAGAACATCCGCGCCAACACTCA
GGGCATGGTGAACCTGTACCTGGACTCTGAGAGGAACCTCAAGGGTTCCG
TGCTTCCGACCTTGGAGCGTCTTCACAAGGAAATCAAGGCCAAGTCGAAG
GAATTGCAGAATGGCGCTGCAAAGGGTGCTAAGGCTGTCGACAAGGCTCG
TGGCGTCACTCAGAAGCACATTGAGCTCCTCGCCCAGCACACGGCTACAC
TTGACGCTGCGTCCCATAACAAGATCGACACCGCCCATGATCCTTACATT
CTCCGTCGAGGTGTCACCCACCGCCTGAACAAGCAGGTTATCGAGGAGAA
CAACAACCGTCAGGACCTCATCGCCGTGCAGAACAACTTCCAGCAGTTCG
AGGCTCATGTCCTGCAGACCGTTCAGGGCGCTATGGAGCAGTTCGTCGTC
TACATGGGCGGTCAGCTTGACCGTCACCGCGCCATGTACACGGACATTCT
GTCCTCGGCGCAAAAGGTCCCTCCGGATTTCGAATGGGTCAACTTCATGA
CCAGAAACGACCACATCCTCGTCAACCCCGACGCACCGCCGCGCTCCCTC
TCCAACATCACCTTCCCTAACCAGGAGCACCGCGCCACCAAGCCCTTGAT
CGAGGGTACTCTGGAGCGCAAGTCTCGCGCCATGCTCAAGGGCTACAGCA
GCGGCTTCTACGTCGTGACACCCGCCCGCTACCTCCACGAGTTCAAGGAC
AACGACGATCTCCGCCGCGACCCCGCTCCCGAACTCTCCCTCTACCTGCC
CGACTGCATCATTGGCGCCATCGACGGCTCCAAGTTCAGCGTCAAGGGCA
AGGACGTCTCCAGCGGCAAGGTTGGAAATGCCTTCCACACAAACACCGAG
CTGAGCTTCAAGGCCGCCAACTCTAACGAGGCCGAGAAGTGGTGGACCGT
CATCAAGGACGCCACTCGCGCTCCGACTTTCTCTTCTAGCACCGCCACCT
CGCCAACCAGCCCTGTTGCGGCCGAGAGCTCTCAGCCGCCCGCCTATGTC
GAGAAGGAGTCCGCTGCTGCTCAGCAGGAACCCACCGCTCAGTCGCCGGC
CACTCCGGCTGCTGTCTCTCGTACCAACACTAGCGGCTCCGGCACTCTTC
CCACCGCTTCTAGTGCCGCGGCACCTCCTGTGACCACTGCTACGGAGGAT
AAGGCGTGAATGTCGACTCCTACCAGTCCCGTGGAGCACAAGCTCCCTCA
GCGTTCGGGGACCGTCACTAGCGCCATGACTCGTCGGACTTCCATGAGTG
ATGACGAGGCCATTCCCGGCTCCGATAGCAACGAGACCACGAACCTCCTC
CTCGAGCGTCTCCGTGCTTGGAAGCACATGTGTGGATATTTGGAAGATTA
TGTGTCTGCGACGGCCAAGGTGTCCAAGTCGCAAGCCAAGGATTTCGAGA
AGGTTTTGAAGACTGTGAACGAACCTCTGCGGGAGAGTCATCATTTCTCC
CAGAGCGCCGGCGGCGTTTCTTCTTGGTTTGAGAACATCCGCGCCAACAC
TCAGGGCATGGTGAACCTGTACCTGGACTCTGAGAGGAACCTCAAGGGTT
CCGTGCTTCCGACCTTGGAGCGTCTTCACAAGGAAATCAAGGCCAAGTCG
AAGGAATTGCAGAATGGCGCTGCAAAGGGTGCTAAGGCTGTCGACAAGGC
TCGTGGCGTCACTCAGAAGCACATTGAGCTCCTCGCCCAGCACACGGCTA
CACTTGACGCTGCGTCCCATAACAAGATCGACACCGCCCATGATCCTTAC
ATTCTCCGTCGAGGTGTCACCCACCGCCTGAACAAGCAGGTTATCGAGGA
GAACAACAACCGTCAGGACCTCATCGCCGTGCAGAACAACTTCCAGCAGT
TCGAGGCTCATGTCCTGCAGACCGTTCAGGGCGCTATGGAGCAGTTCGTC
GTCTACATGGGCGGTCAGCTTGACCGTCACCGCGCCATGTACACGGACAT
TCTGTCCTCGGCGCAAAAGGTCCCTCCGGATTTCGAATGGGTCAACTTCA
TGACCAGAAACGACCACATCCTCGTCAACCCCGACGCACCGCCGCGCTCC
CTCTCCAACATCACCTTCCCTAACCAGGAGCACCGCGCCACCAAGCCCTT
GATCGAGGGTACTCTGGAGCGCAAGTCTCGCGCCATGCTCAAGGGCTACA
GCAGCGGCTTCTACGTCGTGACACCCGCCCGCTACCTCCACGAGTTCAAG
GACAACGACGATCTCCGCCGCGACCCCGCTCCCGAACTCTCCCTCTACCT
GCCCGACTGCATCATTGGCGCCATCGACGGCTCCAAGTTCAGCGTCAAGG
GCAAGGACGTCTCCAGCGGCAAGGTTGGAAATGCCTTCCACACAAACACC
GAGCTGAGCTTCAAGGCCGCCAACTCTAACGAGGCCGAGAAGTGGTGGAC
CGTCATCAAGGACGCCACTCGCGCTCCGACTTTCTCTTCTAGCACCGCCA
CCTCGCCAACCAGCCCTGTTGCGGCCGAGAGCTCTCAGCCGCCCGCCTAT
GTCGAGAAGGAGTCCGCTGCTGCTCAGCAGGAACCCACCGCTCAGTCGCC
GGCCACTCCGGCTGCTGTCTCTCGTACCAACACTAGCGGCTCCGGCACTC
TTCCCACCGCTTCTAGTGCCGCGGCACCTCCTGTGACCACTGCTACGGAG
GATAAGGCGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR043453 |
| DBxref | InterPro:IPR011993 |
| DBxref | InterPro:IPR027267 |
| DBxref | InterPro:IPR001849 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:725636..727335 + |
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