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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:841116..842236+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006775-T1 ID=CBS51388_006775-T1|Name=CBS51388_006775-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1121bp|location=Sequence derived from alignment at An11:841116..842236+ (Aspergillus niger CBS 513.88)
ATGCCTGTTCACAACCCATTCCCCTCATCGTTGCGAAGTACGTATGGTCG
TCGATGTAGACCGTCCTGGCTTTATGACCATCTACAATGCAGCGTTTATC
GCGTAACTCAACACTAACATAAGCTTCATCAAAAAACAGGCGAATGCGAC
AAAGCAGCTCAGATTATCAACTCTTTCACAGATCCTGATGCCTTCAATAG
CCCGGGGCGCACCATCCCACGAAAAGTACTCGCCAGCGCCAAGGTATGCT
CTGAACATATATTCGTTGCTACAACCTTGACTCACAATCAAAGGGCCTCG
CCATCCTCACAGTTGCCAAAGCCGCCTTTCTAGGGTCGGTGCGCCTTGGT
TCTGGTATCCTCGTTGCACGTCTACCGGATGGATCCTGGTCCGCCCCCTC
AGCTATCGCGTCCGTGGGAGGTGGCTTCGGTGGACAGATTGGTGTCGAAT
TAACAGATTTCGTGTTCATTCTGCAGAGCGATCATGCAGTGCAAACGTTT
GCAAAGCTGGGAAGCTTAACTCTGGGTCTCAATCTCTCACTGGCAGTGGG
ACCAGTCGGACGCAGTGGAGAAATTGCGAGCGTCGCAAGCACTGGTGGTG
TCATGGGAATATTCTCGTTCGCGCAAACCAGGGGCCTTTTTGGAGGCGTG
AGTGCAGAATTGGGCATGATAATTGAAAACAGGCTCGTCAATCGGAAACT
GTATGGGGATATTGTCAAGGCACAAGAGTTGCTGAGCGGCGACATCCCTC
CGCCTGACGAGGCCAACAGGCTTATGCAAGCGTTGCAGGCCGATGTGTTT
CATGCTCCTAGGACAAACATCGATTGTGAGCAGGCACCGAAAGAGCCACC
CGCGGAAGTTACCGTTGCCATGCCACCGCAGTCACCGTCGTCCGAGGTGG
CTGAACGAGTTGCTGCGGTGTCGCCTGTGACGCCTAGCGAAGTCCACGAG
GCACCGACATCAGAGCTATTTTCCGCTGGGTCACCGTCTATAGCAGTGAC
ACCACAGACGCCTGTTGAGCTGCCTGGTTCAGTTCAAGAGCTGGACTCCA
CACCTGCACAACCTAAACCTACGGGTCAGCACAGCCCCGTTTCTGCTATC
TCCACCACTCACAATACTTGA back to topCoding sequence (CDS) from alignment at An11:841116..842236+ >CBS51388_006775-T1 ID=CBS51388_006775-T1|Name=CBS51388_006775-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2907bp|location=Sequence derived from alignment at An11:841116..842236+ (Aspergillus niger CBS 513.88)
ATGCCTGTTCACAACCCATTCCCCTCATCGTTGCGAAGCGAATGCGACAA
AGCAGCTCAGATTATCAACTCTTTCACAGATCCTGATGCCTTCAATAGCC
CGGGGCGCACCATCCCACGAAAAGTACTCGCCAGCGCCAAGGGCCTCGCC
ATCCTCACAGTTGCCAAAGCCGCCTTTCTAGGGTCGGTGCGCCTTGGTTC
TGGTATCCTCGTTGCACGTCTACCGGATGGATCCTGGTCCGCCCCCTCAG
CTATCGCGTCCGTGGGAGGTGGCTTCGGTGGACAGATTGGTGTCGAATTA
ACAGATTTCGTGTTCATTCTGCAGAGCGATCATGCAGTGCAAACGTTTGC
AAAGCTGGGAAGCTTAACTCTGGGTCTCAATCTCTCACTGGCAGTGGGAC
CAGTCGGACGCAGTGGAGAAATTGCGAGCGTCGCAAGCACTGGTGGTGTC
ATGGGAATATTCTCGTTCGCGCAAACCAGGGGCCTTTTTGGAGGCGTGAG
TGCAGAATTGGGCATGATAATTGAAAACAGGCTCGTCAATCGGAAACTGT
ATGGGGATATTGTCAAGGCACAAGAGTTGCTGAGCGGCGACATCCCTCCG
CCTGACGAGGCCAACAGGCTTATGCAAGCGTTGCAGGCCGATGTGTTTCA
TGCTCCTAGGACAAACATCGATTGTGAGCAGGCACCGAAAGAGCCACCCG
CGGAAGTTACCGTTGCCATGCCACCGCAGTCACCGTCGTCCGAGGTGGCT
GAACGAGTTGCTGCGGTGTCGCCTGTGACGCCTAGCGAAGTCCACGAGGC
ACCGACATCAGAGCTATTTTCCGCTGGGTCACCGTCTATAGCAGTGACAC
CACAGACGCCTGTTGAGCTGCCTGGTTCAGTTCAAGAGCTGGACTCCACA
CCTGCACAACCTAAACCTACGGGTCAGCACAGCCCCGTTTCTGCTATCTC
CACCACTCACAATACTTGAATGCCTGTTCACAACCCATTCCCCTCATCGT
TGCGAAGCGAATGCGACAAAGCAGCTCAGATTATCAACTCTTTCACAGAT
CCTGATGCCTTCAATAGCCCGGGGCGCACCATCCCACGAAAAGTACTCGC
CAGCGCCAAGGGCCTCGCCATCCTCACAGTTGCCAAAGCCGCCTTTCTAG
GGTCGGTGCGCCTTGGTTCTGGTATCCTCGTTGCACGTCTACCGGATGGA
TCCTGGTCCGCCCCCTCAGCTATCGCGTCCGTGGGAGGTGGCTTCGGTGG
ACAGATTGGTGTCGAATTAACAGATTTCGTGTTCATTCTGCAGAGCGATC
ATGCAGTGCAAACGTTTGCAAAGCTGGGAAGCTTAACTCTGGGTCTCAAT
CTCTCACTGGCAGTGGGACCAGTCGGACGCAGTGGAGAAATTGCGAGCGT
CGCAAGCACTGGTGGTGTCATGGGAATATTCTCGTTCGCGCAAACCAGGG
GCCTTTTTGGAGGCGTGAGTGCAGAATTGGGCATGATAATTGAAAACAGG
CTCGTCAATCGGAAACTGTATGGGGATATTGTCAAGGCACAAGAGTTGCT
GAGCGGCGACATCCCTCCGCCTGACGAGGCCAACAGGCTTATGCAAGCGT
TGCAGGCCGATGTGTTTCATGCTCCTAGGACAAACATCGATTGTGAGCAG
GCACCGAAAGAGCCACCCGCGGAAGTTACCGTTGCCATGCCACCGCAGTC
ACCGTCGTCCGAGGTGGCTGAACGAGTTGCTGCGGTGTCGCCTGTGACGC
CTAGCGAAGTCCACGAGGCACCGACATCAGAGCTATTTTCCGCTGGGTCA
CCGTCTATAGCAGTGACACCACAGACGCCTGTTGAGCTGCCTGGTTCAGT
TCAAGAGCTGGACTCCACACCTGCACAACCTAAACCTACGGGTCAGCACA
GCCCCGTTTCTGCTATCTCCACCACTCACAATACTTGAATGCCTGTTCAC
AACCCATTCCCCTCATCGTTGCGAAGCGAATGCGACAAAGCAGCTCAGAT
TATCAACTCTTTCACAGATCCTGATGCCTTCAATAGCCCGGGGCGCACCA
TCCCACGAAAAGTACTCGCCAGCGCCAAGGGCCTCGCCATCCTCACAGTT
GCCAAAGCCGCCTTTCTAGGGTCGGTGCGCCTTGGTTCTGGTATCCTCGT
TGCACGTCTACCGGATGGATCCTGGTCCGCCCCCTCAGCTATCGCGTCCG
TGGGAGGTGGCTTCGGTGGACAGATTGGTGTCGAATTAACAGATTTCGTG
TTCATTCTGCAGAGCGATCATGCAGTGCAAACGTTTGCAAAGCTGGGAAG
CTTAACTCTGGGTCTCAATCTCTCACTGGCAGTGGGACCAGTCGGACGCA
GTGGAGAAATTGCGAGCGTCGCAAGCACTGGTGGTGTCATGGGAATATTC
TCGTTCGCGCAAACCAGGGGCCTTTTTGGAGGCGTGAGTGCAGAATTGGG
CATGATAATTGAAAACAGGCTCGTCAATCGGAAACTGTATGGGGATATTG
TCAAGGCACAAGAGTTGCTGAGCGGCGACATCCCTCCGCCTGACGAGGCC
AACAGGCTTATGCAAGCGTTGCAGGCCGATGTGTTTCATGCTCCTAGGAC
AAACATCGATTGTGAGCAGGCACCGAAAGAGCCACCCGCGGAAGTTACCG
TTGCCATGCCACCGCAGTCACCGTCGTCCGAGGTGGCTGAACGAGTTGCT
GCGGTGTCGCCTGTGACGCCTAGCGAAGTCCACGAGGCACCGACATCAGA
GCTATTTTCCGCTGGGTCACCGTCTATAGCAGTGACACCACAGACGCCTG
TTGAGCTGCCTGGTTCAGTTCAAGAGCTGGACTCCACACCTGCACAACCT
AAACCTACGGGTCAGCACAGCCCCGTTTCTGCTATCTCCACCACTCACAA
TACTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033643 |
| DBxref | InterPro:IPR007461 |
| DBxref | PFAM:PF04366 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:841116..842236 + |
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