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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:847075..847965+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006778-T1 ID=CBS51388_006778-T1|Name=CBS51388_006778-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=891bp|location=Sequence derived from alignment at An11:847075..847965+ (Aspergillus niger CBS 513.88)
ATGTCGACACTTTCACTAGAGGAGAAGAGTAGTGAGAGTGCTTCAGAAGT
CATCGACCAGAAAGCCTTACTGAAAAGGCTTCAGGCAAAATGCCACTCAC
CGGCTCGTCTGAGGACTGAGGGCTTCATCACATCCCCATGCCCAAAATCA
GACAGCCCTCAATGGAAGGGGATTATCCGCTTGGACCTGTTCAAGCGCAC
ACCCGGTCCCCATCATCATCACCAACATGGAAAATCTGGCCATCGCAAAG
CCAGAGGCGCAGTAGTCATCGACTGCGAAATGGTGCAAGCAGAAAAGGGC
CGGAGAGTCATCGCCTACCTCGCCGCAGTGGACTTTATAACCGGTGAAGT
CCTCATCAACAGTTATGTTGATCCCCAAAGGAGAATATTCAACTGGTGCA
CCCGCTACAGTGGGATTACGCTCAAAGCTATGAAAAAGGCCGTAGCCAAC
GGCGACACCCTACGAGGGTGGATGGGAGCGAGGCGCGCCCTATGGGACTT
TATCGATAGTGATACCGTGCTTATTGGGCACGATATTAAGCATGATCTCA
ATTGCCTGGGGATAATACATCCTAGGATAGTCGATTCGACTATCCTGACA
GCGGAAGCTGTGTTTAGACCTAGGTGGGAAACCCAGCGGTTTCGGAGGAC
TTGGTCGTTGAAGACGCTGTCGTGTGTTTTCCTTGACAGGTTTATCCAAG
GTGGATCAAATGGGCACAGCGCGTTGGAAGATGCAGTTGCCACGAAGGAT
GTCGTTATGTTTTGTCTCGAGCAGCCTGAGTACTTGAAGATATGGGCGGA
GTTTACGAGAGGAGGATGGAATGATCTGGATGACTTTGAGACACTGAAAT
TTCTTATAACAGATAGTGTACAAGTCTCTGATTACCTCTGA back to topCoding sequence (CDS) from alignment at An11:847075..847965+ >CBS51388_006778-T1 ID=CBS51388_006778-T1|Name=CBS51388_006778-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=891bp|location=Sequence derived from alignment at An11:847075..847965+ (Aspergillus niger CBS 513.88)
ATGTCGACACTTTCACTAGAGGAGAAGAGTAGTGAGAGTGCTTCAGAAGT
CATCGACCAGAAAGCCTTACTGAAAAGGCTTCAGGCAAAATGCCACTCAC
CGGCTCGTCTGAGGACTGAGGGCTTCATCACATCCCCATGCCCAAAATCA
GACAGCCCTCAATGGAAGGGGATTATCCGCTTGGACCTGTTCAAGCGCAC
ACCCGGTCCCCATCATCATCACCAACATGGAAAATCTGGCCATCGCAAAG
CCAGAGGCGCAGTAGTCATCGACTGCGAAATGGTGCAAGCAGAAAAGGGC
CGGAGAGTCATCGCCTACCTCGCCGCAGTGGACTTTATAACCGGTGAAGT
CCTCATCAACAGTTATGTTGATCCCCAAAGGAGAATATTCAACTGGTGCA
CCCGCTACAGTGGGATTACGCTCAAAGCTATGAAAAAGGCCGTAGCCAAC
GGCGACACCCTACGAGGGTGGATGGGAGCGAGGCGCGCCCTATGGGACTT
TATCGATAGTGATACCGTGCTTATTGGGCACGATATTAAGCATGATCTCA
ATTGCCTGGGGATAATACATCCTAGGATAGTCGATTCGACTATCCTGACA
GCGGAAGCTGTGTTTAGACCTAGGTGGGAAACCCAGCGGTTTCGGAGGAC
TTGGTCGTTGAAGACGCTGTCGTGTGTTTTCCTTGACAGGTTTATCCAAG
GTGGATCAAATGGGCACAGCGCGTTGGAAGATGCAGTTGCCACGAAGGAT
GTCGTTATGTTTTGTCTCGAGCAGCCTGAGTACTTGAAGATATGGGCGGA
GTTTACGAGAGGAGGATGGAATGATCTGGATGACTTTGAGACACTGAAAT
TTCTTATAACAGATAGTGTACAAGTCTCTGATTACCTCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR036397 |
| DBxref | InterPro:IPR013520 |
| DBxref | PFAM:PF00929 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:847075..847965 + |
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