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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:904348..906846+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006797-T1 ID=CBS51388_006797-T1|Name=CBS51388_006797-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2499bp|location=Sequence derived from alignment at An11:904348..906846+ (Aspergillus niger CBS 513.88)
ATGGCTGACTATAAAGATCCCATCTCCTTGAGCAGCCACTCTGATAAAGA
GAAGGCTGACGTGAAAGCTACCAAGATCGATGACACCGATCTCGAGTCTC
TCCTGGATCAATTGCGGCAGATCGTGGCCGAAAATGAACTCGACGTCAAC
TTCCCGGTTCAAATCATCGCTCAGGCGCGCGAGATCCTCGATGCCGACAC
CAAGCATATTGATCTCTCTCAGCTGCAGGAGGTCATCTCAGATATTGAGA
AGCACCGGGATCTCATCGAGAATGACTCTCCCTATCCGGAGGTGCGCGCT
GTGGTTGACCCAACCGATGACCCTGATATCTCGGCCAACACTTTTCGAGC
CTGGTTCCTGGGCATGATAGCTACCATCGTCTTCACGGGTGTCAATCAGT
TCTTCACTTTGCGCTATCCGACCATTATCATTTATTCCATTGTCGCTCAA
TTGCTATCCTACCCCTGCGGTGTCTTCATGGCTAGGACTTTGCCTACTCG
CCAGTGGAACCTGTTTGGCTGGAAGTTCACTCTGAACCCTGGCCCATTCA
ACCAGAAGGAGCACATGCTCATCACTGTCATGTCCAATGTCTCCTTCGGC
GGTACCAACGGCACAGCCTACGTGACCTACATCTTCCAGGTACTGAAAGC
CAAGTCCTTCTATAACCTGACATCTCTGTACGATCAAGCCGGCTTCCAAA
TCCTTAATTACTCTCTCCACACAACTATTGGGCTACGGCTGTGCCGGCGT
GGTACGTCGATTCCTAGTATACCCGCCATCGATGATCTACCCTAAGTGCC
TCTCGACCATTGCTTTGAACAAGGCACTGCACAGCGATGAAGGCCGCGAG
CGGGTTCACGGTTGGAAAATCAGCCGATACCGCTTCTTCATGTACTGCTT
CATAGGCATGTTCATCTACTACTGGTTCCCGGGGTACATCTTTCAGGCAC
TCTCCTACTTCAACTGGATGAATTGGATCGCCCCGGATAACGTCAAGTTA
GCGCTCATCTGTGGCACTATCACCGGGCTTGGCCTCAACCCTTTACCTAC
CTTTGATTGGAACATCGTCTACGCACTCTATGACCCGATTATCTACCCCT
TCTACGCATTGGCCAACATAGGTATCGGTACCATCCTGGGAGCCTTCTGC
GTCATCGCCCCCATATACTTCAGCAATGTGTGGAAGACCGCTTACTTCCC
CATCATCAGCAACGACGTCTTCGATGACACCGGCAACACCTACAATGTCA
CCCGCGTGCTGAACAGCAAGGGCGAATTCGACCTAGAGGGTTATGAAGGC
TACAGCCAACCCTACCTGACGGCCGGGTACTCCGTGATGTTCTTCTTTTT
CTTCGCCATGTACCTGGCCACGATCGTGCACGTCGCGCTCTACAACCGGC
GCGAGATCATGAAGGGCTTCCGAGCCCTATGGAAGTGGGCCAGCGCGCGC
GAAGAGCACGAGGACGTGCACAATCGCTTGATGAAGCGATACAAGGAGGT
TCCCGAATGGTGGTACCTGGCTGTGCTGGCCGTGTCCTTTGTATTTGGTT
GCATCGGCGTGGCCAAATACGACACTGGCATGCCCATCTGGGGTATCGTC
TTCGCCATCATCTTGTGTCTCGTGCTACAGATCCCATACGGTATGGTCTA
CGCCATCACCAACTCCGAGGTCACGAACAACGTGATTGCCGAGTTCATTG
GCGGATACGCCATCCCCGGCAAGCCCGTCGCCAACCTCCTATTCAAGTCA
TTCGGATACATCGCCTGTGCCCAGTCCATCCAGTTCGTAGCTGATCTGAA
ACTGGGCCACTATATGAAGATTCCCCCGAGAGTGATGTTCGCAGCCCAGC
TGGTGGCTACCATCGTCGGGGCATTCGTGTCTCTTGGAGTAAATGTTTGG
GCCCTTGCCAACATCGAGGACGTGTGCTCTACCACCCAGCCGAACAAGTT
CACTTGCGCCAGTAAGCTACCCCTCCTTCTCATATCCCCACATACCTAAC
TAAGTTCATAGGCGCCCGAGACTTCTACACTTCCTCCGTAATCTGGGGCG
CCATCGGCCCACGCCGCCTCTTCGGCTCAGGGCAAATCTACAACCCTCTC
CTCTACGGCTTCCTCGTCGGCGCCCTCCTTCCCATCCCCTTCTACTTCAT
CACCAAGTGGCGCCCGCGCTCCGGTCTCCGATACGTGTACATCCCACTCG
TGTTCTACGGGATCTGCGATATCGCGCCGTACAATGTCACGTACGCGTGG
TGTCCGATGGTGGTGGGGTTCATTTTCAATTACTGGATTAAGAGACGGTG
GCAGGCGTGGTGGGAGAAGTACGCGTATGTGTTCACGACGGCGATGTCGT
GCGGAGTGGCTATCTCGGCGATTATTATTTTCTTTGCCGTCGAATATAAG
GAGGTCGATTTGAATTGGTGGGGGAATGAGGTTTCGTATGCTGGGTGTGA
TAATGATGGGTGTGCGCTGTTGGCGATTCCCGAGGGGGGGAAGATTTGA back to topCoding sequence (CDS) from alignment at An11:904348..906846+ >CBS51388_006797-T1 ID=CBS51388_006797-T1|Name=CBS51388_006797-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7299bp|location=Sequence derived from alignment at An11:904348..906846+ (Aspergillus niger CBS 513.88)
ATGGCTGACTATAAAGATCCCATCTCCTTGAGCAGCCACTCTGATAAAGA
GAAGGCTGACGTGAAAGCTACCAAGATCGATGACACCGATCTCGAGTCTC
TCCTGGATCAATTGCGGCAGATCGTGGCCGAAAATGAACTCGACGTCAAC
TTCCCGGTTCAAATCATCGCTCAGGCGCGCGAGATCCTCGATGCCGACAC
CAAGCATATTGATCTCTCTCAGCTGCAGGAGGTCATCTCAGATATTGAGA
AGCACCGGGATCTCATCGAGAATGACTCTCCCTATCCGGAGGTGCGCGCT
GTGGTTGACCCAACCGATGACCCTGATATCTCGGCCAACACTTTTCGAGC
CTGGTTCCTGGGCATGATAGCTACCATCGTCTTCACGGGTGTCAATCAGT
TCTTCACTTTGCGCTATCCGACCATTATCATTTATTCCATTGTCGCTCAA
TTGCTATCCTACCCCTGCGGTGTCTTCATGGCTAGGACTTTGCCTACTCG
CCAGTGGAACCTGTTTGGCTGGAAGTTCACTCTGAACCCTGGCCCATTCA
ACCAGAAGGAGCACATGCTCATCACTGTCATGTCCAATGTCTCCTTCGGC
GGTACCAACGGCACAGCCTACGTGACCTACATCTTCCAGGTACTGAAAGC
CAAGTCCTTCTATAACCTGACATCTCTGTACGATCAAGCCGGCTTCCAAA
TCCTTAATTACTCTCTCCACACAACTATTGGGCTACGGCTGTGCCGGCGT
GTATACCCGCCATCGATGATCTACCCTAAGTGCCTCTCGACCATTGCTTT
GAACAAGGCACTGCACAGCGATGAAGGCCGCGAGCGGGTTCACGGTTGGA
AAATCAGCCGATACCGCTTCTTCATGTACTGCTTCATAGGCATGTTCATC
TACTACTGGTTCCCGGGGTACATCTTTCAGGCACTCTCCTACTTCAACTG
GATGAATTGGATCGCCCCGGATAACGTCAAGTTAGCGCTCATCTGTGGCA
CTATCACCGGGCTTGGCCTCAACCCTTTACCTACCTTTGATTGGAACATC
GTCTACGCACTCTATGACCCGATTATCTACCCCTTCTACGCATTGGCCAA
CATAGGTATCGGTACCATCCTGGGAGCCTTCTGCGTCATCGCCCCCATAT
ACTTCAGCAATGTGTGGAAGACCGCTTACTTCCCCATCATCAGCAACGAC
GTCTTCGATGACACCGGCAACACCTACAATGTCACCCGCGTGCTGAACAG
CAAGGGCGAATTCGACCTAGAGGGTTATGAAGGCTACAGCCAACCCTACC
TGACGGCCGGGTACTCCGTGATGTTCTTCTTTTTCTTCGCCATGTACCTG
GCCACGATCGTGCACGTCGCGCTCTACAACCGGCGCGAGATCATGAAGGG
CTTCCGAGCCCTATGGAAGTGGGCCAGCGCGCGCGAAGAGCACGAGGACG
TGCACAATCGCTTGATGAAGCGATACAAGGAGGTTCCCGAATGGTGGTAC
CTGGCTGTGCTGGCCGTGTCCTTTGTATTTGGTTGCATCGGCGTGGCCAA
ATACGACACTGGCATGCCCATCTGGGGTATCGTCTTCGCCATCATCTTGT
GTCTCGTGCTACAGATCCCATACGGTATGGTCTACGCCATCACCAACTCC
GAGGTCACGAACAACGTGATTGCCGAGTTCATTGGCGGATACGCCATCCC
CGGCAAGCCCGTCGCCAACCTCCTATTCAAGTCATTCGGATACATCGCCT
GTGCCCAGTCCATCCAGTTCGTAGCTGATCTGAAACTGGGCCACTATATG
AAGATTCCCCCGAGAGTGATGTTCGCAGCCCAGCTGGTGGCTACCATCGT
CGGGGCATTCGTGTCTCTTGGAGTAAATGTTTGGGCCCTTGCCAACATCG
AGGACGTGTGCTCTACCACCCAGCCGAACAAGTTCACTTGCGCCAGCGCC
CGAGACTTCTACACTTCCTCCGTAATCTGGGGCGCCATCGGCCCACGCCG
CCTCTTCGGCTCAGGGCAAATCTACAACCCTCTCCTCTACGGCTTCCTCG
TCGGCGCCCTCCTTCCCATCCCCTTCTACTTCATCACCAAGTGGCGCCCG
CGCTCCGGTCTCCGATACGTGTACATCCCACTCGTGTTCTACGGGATCTG
CGATATCGCGCCGTACAATGTCACGTACGCGTGGTGTCCGATGGTGGTGG
GGTTCATTTTCAATTACTGGATTAAGAGACGGTGGCAGGCGTGGTGGGAG
AAGTACGCGTATGTGTTCACGACGGCGATGTCGTGCGGAGTGGCTATCTC
GGCGATTATTATTTTCTTTGCCGTCGAATATAAGGAGGTCGATTTGAATT
GGTGGGGGAATGAGGTTTCGTATGCTGGGTGTGATAATGATGGGTGTGCG
CTGTTGGCGATTCCCGAGGGGGGGAAGATTTGAATGGCTGACTATAAAGA
TCCCATCTCCTTGAGCAGCCACTCTGATAAAGAGAAGGCTGACGTGAAAG
CTACCAAGATCGATGACACCGATCTCGAGTCTCTCCTGGATCAATTGCGG
CAGATCGTGGCCGAAAATGAACTCGACGTCAACTTCCCGGTTCAAATCAT
CGCTCAGGCGCGCGAGATCCTCGATGCCGACACCAAGCATATTGATCTCT
CTCAGCTGCAGGAGGTCATCTCAGATATTGAGAAGCACCGGGATCTCATC
GAGAATGACTCTCCCTATCCGGAGGTGCGCGCTGTGGTTGACCCAACCGA
TGACCCTGATATCTCGGCCAACACTTTTCGAGCCTGGTTCCTGGGCATGA
TAGCTACCATCGTCTTCACGGGTGTCAATCAGTTCTTCACTTTGCGCTAT
CCGACCATTATCATTTATTCCATTGTCGCTCAATTGCTATCCTACCCCTG
CGGTGTCTTCATGGCTAGGACTTTGCCTACTCGCCAGTGGAACCTGTTTG
GCTGGAAGTTCACTCTGAACCCTGGCCCATTCAACCAGAAGGAGCACATG
CTCATCACTGTCATGTCCAATGTCTCCTTCGGCGGTACCAACGGCACAGC
CTACGTGACCTACATCTTCCAGGTACTGAAAGCCAAGTCCTTCTATAACC
TGACATCTCTGTACGATCAAGCCGGCTTCCAAATCCTTAATTACTCTCTC
CACACAACTATTGGGCTACGGCTGTGCCGGCGTGTATACCCGCCATCGAT
GATCTACCCTAAGTGCCTCTCGACCATTGCTTTGAACAAGGCACTGCACA
GCGATGAAGGCCGCGAGCGGGTTCACGGTTGGAAAATCAGCCGATACCGC
TTCTTCATGTACTGCTTCATAGGCATGTTCATCTACTACTGGTTCCCGGG
GTACATCTTTCAGGCACTCTCCTACTTCAACTGGATGAATTGGATCGCCC
CGGATAACGTCAAGTTAGCGCTCATCTGTGGCACTATCACCGGGCTTGGC
CTCAACCCTTTACCTACCTTTGATTGGAACATCGTCTACGCACTCTATGA
CCCGATTATCTACCCCTTCTACGCATTGGCCAACATAGGTATCGGTACCA
TCCTGGGAGCCTTCTGCGTCATCGCCCCCATATACTTCAGCAATGTGTGG
AAGACCGCTTACTTCCCCATCATCAGCAACGACGTCTTCGATGACACCGG
CAACACCTACAATGTCACCCGCGTGCTGAACAGCAAGGGCGAATTCGACC
TAGAGGGTTATGAAGGCTACAGCCAACCCTACCTGACGGCCGGGTACTCC
GTGATGTTCTTCTTTTTCTTCGCCATGTACCTGGCCACGATCGTGCACGT
CGCGCTCTACAACCGGCGCGAGATCATGAAGGGCTTCCGAGCCCTATGGA
AGTGGGCCAGCGCGCGCGAAGAGCACGAGGACGTGCACAATCGCTTGATG
AAGCGATACAAGGAGGTTCCCGAATGGTGGTACCTGGCTGTGCTGGCCGT
GTCCTTTGTATTTGGTTGCATCGGCGTGGCCAAATACGACACTGGCATGC
CCATCTGGGGTATCGTCTTCGCCATCATCTTGTGTCTCGTGCTACAGATC
CCATACGGTATGGTCTACGCCATCACCAACTCCGAGGTCACGAACAACGT
GATTGCCGAGTTCATTGGCGGATACGCCATCCCCGGCAAGCCCGTCGCCA
ACCTCCTATTCAAGTCATTCGGATACATCGCCTGTGCCCAGTCCATCCAG
TTCGTAGCTGATCTGAAACTGGGCCACTATATGAAGATTCCCCCGAGAGT
GATGTTCGCAGCCCAGCTGGTGGCTACCATCGTCGGGGCATTCGTGTCTC
TTGGAGTAAATGTTTGGGCCCTTGCCAACATCGAGGACGTGTGCTCTACC
ACCCAGCCGAACAAGTTCACTTGCGCCAGCGCCCGAGACTTCTACACTTC
CTCCGTAATCTGGGGCGCCATCGGCCCACGCCGCCTCTTCGGCTCAGGGC
AAATCTACAACCCTCTCCTCTACGGCTTCCTCGTCGGCGCCCTCCTTCCC
ATCCCCTTCTACTTCATCACCAAGTGGCGCCCGCGCTCCGGTCTCCGATA
CGTGTACATCCCACTCGTGTTCTACGGGATCTGCGATATCGCGCCGTACA
ATGTCACGTACGCGTGGTGTCCGATGGTGGTGGGGTTCATTTTCAATTAC
TGGATTAAGAGACGGTGGCAGGCGTGGTGGGAGAAGTACGCGTATGTGTT
CACGACGGCGATGTCGTGCGGAGTGGCTATCTCGGCGATTATTATTTTCT
TTGCCGTCGAATATAAGGAGGTCGATTTGAATTGGTGGGGGAATGAGGTT
TCGTATGCTGGGTGTGATAATGATGGGTGTGCGCTGTTGGCGATTCCCGA
GGGGGGGAAGATTTGAATGGCTGACTATAAAGATCCCATCTCCTTGAGCA
GCCACTCTGATAAAGAGAAGGCTGACGTGAAAGCTACCAAGATCGATGAC
ACCGATCTCGAGTCTCTCCTGGATCAATTGCGGCAGATCGTGGCCGAAAA
TGAACTCGACGTCAACTTCCCGGTTCAAATCATCGCTCAGGCGCGCGAGA
TCCTCGATGCCGACACCAAGCATATTGATCTCTCTCAGCTGCAGGAGGTC
ATCTCAGATATTGAGAAGCACCGGGATCTCATCGAGAATGACTCTCCCTA
TCCGGAGGTGCGCGCTGTGGTTGACCCAACCGATGACCCTGATATCTCGG
CCAACACTTTTCGAGCCTGGTTCCTGGGCATGATAGCTACCATCGTCTTC
ACGGGTGTCAATCAGTTCTTCACTTTGCGCTATCCGACCATTATCATTTA
TTCCATTGTCGCTCAATTGCTATCCTACCCCTGCGGTGTCTTCATGGCTA
GGACTTTGCCTACTCGCCAGTGGAACCTGTTTGGCTGGAAGTTCACTCTG
AACCCTGGCCCATTCAACCAGAAGGAGCACATGCTCATCACTGTCATGTC
CAATGTCTCCTTCGGCGGTACCAACGGCACAGCCTACGTGACCTACATCT
TCCAGGTACTGAAAGCCAAGTCCTTCTATAACCTGACATCTCTGTACGAT
CAAGCCGGCTTCCAAATCCTTAATTACTCTCTCCACACAACTATTGGGCT
ACGGCTGTGCCGGCGTGTATACCCGCCATCGATGATCTACCCTAAGTGCC
TCTCGACCATTGCTTTGAACAAGGCACTGCACAGCGATGAAGGCCGCGAG
CGGGTTCACGGTTGGAAAATCAGCCGATACCGCTTCTTCATGTACTGCTT
CATAGGCATGTTCATCTACTACTGGTTCCCGGGGTACATCTTTCAGGCAC
TCTCCTACTTCAACTGGATGAATTGGATCGCCCCGGATAACGTCAAGTTA
GCGCTCATCTGTGGCACTATCACCGGGCTTGGCCTCAACCCTTTACCTAC
CTTTGATTGGAACATCGTCTACGCACTCTATGACCCGATTATCTACCCCT
TCTACGCATTGGCCAACATAGGTATCGGTACCATCCTGGGAGCCTTCTGC
GTCATCGCCCCCATATACTTCAGCAATGTGTGGAAGACCGCTTACTTCCC
CATCATCAGCAACGACGTCTTCGATGACACCGGCAACACCTACAATGTCA
CCCGCGTGCTGAACAGCAAGGGCGAATTCGACCTAGAGGGTTATGAAGGC
TACAGCCAACCCTACCTGACGGCCGGGTACTCCGTGATGTTCTTCTTTTT
CTTCGCCATGTACCTGGCCACGATCGTGCACGTCGCGCTCTACAACCGGC
GCGAGATCATGAAGGGCTTCCGAGCCCTATGGAAGTGGGCCAGCGCGCGC
GAAGAGCACGAGGACGTGCACAATCGCTTGATGAAGCGATACAAGGAGGT
TCCCGAATGGTGGTACCTGGCTGTGCTGGCCGTGTCCTTTGTATTTGGTT
GCATCGGCGTGGCCAAATACGACACTGGCATGCCCATCTGGGGTATCGTC
TTCGCCATCATCTTGTGTCTCGTGCTACAGATCCCATACGGTATGGTCTA
CGCCATCACCAACTCCGAGGTCACGAACAACGTGATTGCCGAGTTCATTG
GCGGATACGCCATCCCCGGCAAGCCCGTCGCCAACCTCCTATTCAAGTCA
TTCGGATACATCGCCTGTGCCCAGTCCATCCAGTTCGTAGCTGATCTGAA
ACTGGGCCACTATATGAAGATTCCCCCGAGAGTGATGTTCGCAGCCCAGC
TGGTGGCTACCATCGTCGGGGCATTCGTGTCTCTTGGAGTAAATGTTTGG
GCCCTTGCCAACATCGAGGACGTGTGCTCTACCACCCAGCCGAACAAGTT
CACTTGCGCCAGCGCCCGAGACTTCTACACTTCCTCCGTAATCTGGGGCG
CCATCGGCCCACGCCGCCTCTTCGGCTCAGGGCAAATCTACAACCCTCTC
CTCTACGGCTTCCTCGTCGGCGCCCTCCTTCCCATCCCCTTCTACTTCAT
CACCAAGTGGCGCCCGCGCTCCGGTCTCCGATACGTGTACATCCCACTCG
TGTTCTACGGGATCTGCGATATCGCGCCGTACAATGTCACGTACGCGTGG
TGTCCGATGGTGGTGGGGTTCATTTTCAATTACTGGATTAAGAGACGGTG
GCAGGCGTGGTGGGAGAAGTACGCGTATGTGTTCACGACGGCGATGTCGT
GCGGAGTGGCTATCTCGGCGATTATTATTTTCTTTGCCGTCGAATATAAG
GAGGTCGATTTGAATTGGTGGGGGAATGAGGTTTCGTATGCTGGGTGTGA
TAATGATGGGTGTGCGCTGTTGGCGATTCCCGAGGGGGGGAAGATTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004813 |
| DBxref | InterPro:IPR004648 |
| DBxref | PFAM:PF03169 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:904348..906846 + |
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