You are here

Home

CBS51388_006801-T1, CBS51388_006801-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006801-T1
Unique NameCBS51388_006801-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:912395..913559-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006801-T1 ID=CBS51388_006801-T1|Name=CBS51388_006801-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1165bp|location=Sequence derived from alignment at An11:912395..913559- (Aspergillus niger CBS 513.88)
ATGGCATTGACATACGATGTCTTCCGCGGCTCTCCCGAGGGCAAGATCGT
CACCGACAAAGTGTCCAGCGACCTCGGATACAATGAAGTCTTCATTGAAA
CCCTCGTATCCGGCGTATGCGGAACAGACGAACACTATCTGAAGTCGGAC
CAAGTCCTAGGCCACGAGGGTGTGGGGATCATCAAGGCCGCTGGACCCGG
TGTGCAGACGGTGAAGATCGGTGATCGCGTGGGATTTGGTTTCACTCATG
GGATCTGCGCGCGATGCGATAACTGCGCGAGAGGTAAGATGTGGCATTCT
GTTAATTCATTAGCAATTTGATAGTTTATGGTTATGTGTGTTGAATATAC
TAACATAACCTTGCTGGGTGTAAAAGACATGGACCAATTCTGCCGAGAGA
AGAAACAATACGGCACCAACGATTTCAACAACGGCAGCTTCAGCTACAAC
GCCATCTGGGATGCAAACTGCGTATTTCCCATCCCGGACGAGATAGAATC
AACCCACGCTGCACCTCTGATGTGTGCAGGGGCAACGGTGTGGACTGTTT
TGACACGGTTCGACATGCGTCCCGGTGATCGGGTCGGAATCCAGGGGGTG
GGCGGACTCGGTCACCTGGCTATCAAGCTGGCCGCTGCTATGGGGTATCA
TGTTGTCGTGCTGTCAAGTTCTGAGGCCAAGAGGCAAGAAGCTATGGAGT
ACGGCGCGTCGGAGTATCATGTCTTTCGGGCAGAAAGCCCTCTCCGGTCG
TTTAAGCCTCTGAAGCATCTCCTGCTTTGTGGGAGTGGTGGCGTGAAGTA
TTCCTCGTGAGTGGCTCTGCTGTTGCTTCTGGTGATGCATGTGTCGGATC
GTGTGACTGACTGAATGTGTCGTGGACAGTATCCTACCGCTCATGGATAG
TCCTAGTGCGATTTATCCGTTGACTGCGACGTTTGAGGCCTCACCCATCC
CTACCCTGGAGCTATGCTTCAAGGGCTGTAAGATTCAGGGCTCCTTAGTC
GCTTCCCGTCAGAGTACACAGGCGCTCTTGGAATTCGCAGCGAAGAAGCA
GATTTATCCTACTATAATGACGTTTCCGTTCACCAGCGCTGGGATCGAGG
AGGCGATGAGCCAGTTGAGGGATGGAAAGGTGCGCTATAGGGCTGTGCTA
GTTCGGGAGACATAG
back to top

Coding sequence (CDS) from alignment at An11:912395..913559-

>CBS51388_006801-T1 ID=CBS51388_006801-T1|Name=CBS51388_006801-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2997bp|location=Sequence derived from alignment at An11:912395..913559- (Aspergillus niger CBS 513.88)
TATCCTACCGCTCATGGATAGTCCTAGTGCGATTTATCCGTTGACTGCGA
CGTTTGAGGCCTCACCCATCCCTACCCTGGAGCTATGCTTCAAGGGCTGT
AAGATTCAGGGCTCCTTAGTCGCTTCCCGTCAGAGTACACAGGCGCTCTT
GGAATTCGCAGCGAAGAAGCAGATTTATCCTACTATAATGACGTTTCCGT
TCACCAGCGCTGGGATCGAGGAGGCGATGAGCCAGTTGAGGGATGGAAAG
GTGCGCTATAGGGCTGTGCTAGTTCGGGAGACATAGACATGGACCAATTC
TGCCGAGAGAAGAAACAATACGGCACCAACGATTTCAACAACGGCAGCTT
CAGCTACAACGCCATCTGGGATGCAAACTGCGTATTTCCCATCCCGGACG
AGATAGAATCAACCCACGCTGCACCTCTGATGTGTGCAGGGGCAACGGTG
TGGACTGTTTTGACACGGTTCGACATGCGTCCCGGTGATCGGGTCGGAAT
CCAGGGGGTGGGCGGACTCGGTCACCTGGCTATCAAGCTGGCCGCTGCTA
TGGGGTATCATGTTGTCGTGCTGTCAAGTTCTGAGGCCAAGAGGCAAGAA
GCTATGGAGTACGGCGCGTCGGAGTATCATGTCTTTCGGGCAGAAAGCCC
TCTCCGGTCGTTTAAGCCTCTGAAGCATCTCCTGCTTTGTGGGAGTGGTG
GCGTGAAGTATTCCTCATGGCATTGACATACGATGTCTTCCGCGGCTCTC
CCGAGGGCAAGATCGTCACCGACAAAGTGTCCAGCGACCTCGGATACAAT
GAAGTCTTCATTGAAACCCTCGTATCCGGCGTATGCGGAACAGACGAACA
CTATCTGAAGTCGGACCAAGTCCTAGGCCACGAGGGTGTGGGGATCATCA
AGGCCGCTGGACCCGGTGTGCAGACGGTGAAGATCGGTGATCGCGTGGGA
TTTGGTTTCACTCATGGGATCTGCGCGCGATGCGATAACTGCGCGAGAGT
ATCCTACCGCTCATGGATAGTCCTAGTGCGATTTATCCGTTGACTGCGAC
GTTTGAGGCCTCACCCATCCCTACCCTGGAGCTATGCTTCAAGGGCTGTA
AGATTCAGGGCTCCTTAGTCGCTTCCCGTCAGAGTACACAGGCGCTCTTG
GAATTCGCAGCGAAGAAGCAGATTTATCCTACTATAATGACGTTTCCGTT
CACCAGCGCTGGGATCGAGGAGGCGATGAGCCAGTTGAGGGATGGAAAGG
TGCGCTATAGGGCTGTGCTAGTTCGGGAGACATAGACATGGACCAATTCT
GCCGAGAGAAGAAACAATACGGCACCAACGATTTCAACAACGGCAGCTTC
AGCTACAACGCCATCTGGGATGCAAACTGCGTATTTCCCATCCCGGACGA
GATAGAATCAACCCACGCTGCACCTCTGATGTGTGCAGGGGCAACGGTGT
GGACTGTTTTGACACGGTTCGACATGCGTCCCGGTGATCGGGTCGGAATC
CAGGGGGTGGGCGGACTCGGTCACCTGGCTATCAAGCTGGCCGCTGCTAT
GGGGTATCATGTTGTCGTGCTGTCAAGTTCTGAGGCCAAGAGGCAAGAAG
CTATGGAGTACGGCGCGTCGGAGTATCATGTCTTTCGGGCAGAAAGCCCT
CTCCGGTCGTTTAAGCCTCTGAAGCATCTCCTGCTTTGTGGGAGTGGTGG
CGTGAAGTATTCCTCATGGCATTGACATACGATGTCTTCCGCGGCTCTCC
CGAGGGCAAGATCGTCACCGACAAAGTGTCCAGCGACCTCGGATACAATG
AAGTCTTCATTGAAACCCTCGTATCCGGCGTATGCGGAACAGACGAACAC
TATCTGAAGTCGGACCAAGTCCTAGGCCACGAGGGTGTGGGGATCATCAA
GGCCGCTGGACCCGGTGTGCAGACGGTGAAGATCGGTGATCGCGTGGGAT
TTGGTTTCACTCATGGGATCTGCGCGCGATGCGATAACTGCGCGAGAGTA
TCCTACCGCTCATGGATAGTCCTAGTGCGATTTATCCGTTGACTGCGACG
TTTGAGGCCTCACCCATCCCTACCCTGGAGCTATGCTTCAAGGGCTGTAA
GATTCAGGGCTCCTTAGTCGCTTCCCGTCAGAGTACACAGGCGCTCTTGG
AATTCGCAGCGAAGAAGCAGATTTATCCTACTATAATGACGTTTCCGTTC
ACCAGCGCTGGGATCGAGGAGGCGATGAGCCAGTTGAGGGATGGAAAGGT
GCGCTATAGGGCTGTGCTAGTTCGGGAGACATAGACATGGACCAATTCTG
CCGAGAGAAGAAACAATACGGCACCAACGATTTCAACAACGGCAGCTTCA
GCTACAACGCCATCTGGGATGCAAACTGCGTATTTCCCATCCCGGACGAG
ATAGAATCAACCCACGCTGCACCTCTGATGTGTGCAGGGGCAACGGTGTG
GACTGTTTTGACACGGTTCGACATGCGTCCCGGTGATCGGGTCGGAATCC
AGGGGGTGGGCGGACTCGGTCACCTGGCTATCAAGCTGGCCGCTGCTATG
GGGTATCATGTTGTCGTGCTGTCAAGTTCTGAGGCCAAGAGGCAAGAAGC
TATGGAGTACGGCGCGTCGGAGTATCATGTCTTTCGGGCAGAAAGCCCTC
TCCGGTCGTTTAAGCCTCTGAAGCATCTCCTGCTTTGTGGGAGTGGTGGC
GTGAAGTATTCCTCATGGCATTGACATACGATGTCTTCCGCGGCTCTCCC
GAGGGCAAGATCGTCACCGACAAAGTGTCCAGCGACCTCGGATACAATGA
AGTCTTCATTGAAACCCTCGTATCCGGCGTATGCGGAACAGACGAACACT
ATCTGAAGTCGGACCAAGTCCTAGGCCACGAGGGTGTGGGGATCATCAAG
GCCGCTGGACCCGGTGTGCAGACGGTGAAGATCGGTGATCGCGTGGGATT
TGGTTTCACTCATGGGATCTGCGCGCGATGCGATAACTGCGCGAGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006801CBS51388_006801Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006801-T1CBS51388_006801-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006801-T1.cdsCBS51388_006801-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006801-T1.exon3CBS51388_006801-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006801-T1.exon2CBS51388_006801-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006801-T1.exon1CBS51388_006801-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR002328
DBxrefInterPro:IPR013154
DBxrefInterPro:IPR013149
DBxrefInterPro:IPR020843
DBxrefPFAM:PF00107
DBxrefPFAM:PF08240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:912395..913559 -
Powered by Drupal