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CBS51388_006809-T1, CBS51388_006809-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006809-T1
Unique NameCBS51388_006809-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:933488..934852+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006809-T1 ID=CBS51388_006809-T1|Name=CBS51388_006809-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1365bp|location=Sequence derived from alignment at An11:933488..934852+ (Aspergillus niger CBS 513.88)
ATGGTATATCGCGGACGGAACCAGGAAGGTCTGGCCTGGCAAACACTAGG
CATGGCCATTCGGACTGCTTATACACTGGGGATCAACCGGACATCTACAT
CCAATTCCGAAGGAAAGAATATCGAACGACGCGTGTGGGCAGTCTGTTGG
TGCCTGGAAAAGATGATGCATCTGGAATCGGGACGACCAACCGTCATCGG
ATATCAGCATCCTAGGCCAGAGGATGCTCTAGGAGAGAGTAAATTTCTGC
AGTGGCACGTCGAGCTTGGGGAATACCAAGGCAACATCAGTGACCATCTT
TACAGCCATCAATCAGGGACAAGGGATGTACGACAGATACTCTTGGATAC
AGCGCGACTTGACCGCGAACTGTTGTCCTGGGCCAATCGGGTCCCTAGTG
ACCTGCGTCCGGGGAGCGATATCTTCTGCGCGGACGAAGAGTTTCATGCA
GCCGCGTTTCTGTCCATCCAGTACCACAGCACGCTGATCTCGCTGCATCG
CGCGGCCCTCATTGCCCCGACATTGAGCTTTGAGGAAGAAGTGGCAAGGT
ATTGCTCCGATGAGCCATCGCAGTTTCGAATGCGTCATGGAGAGTCAATC
TGCGTGAGCAGCGCTCGAGCGATTGCTAAACTTAGTGTCCAGCTGTCGGA
ACGCAAGGCAGACTCGCAGATCATTACGGCTGGACCGTCCCTTTTGGCTT
GCATTGTGCTGGCCATCTTCCTGATTAAGCATCCAGGTTCTCGGTTGCAG
GCCATGGATTTGCAGGTAAGATACGCTTCACCTTGCTGAGAATGAAGTAC
TGACGAGGACAGCTTCTCAAAGCGTGTTTAGAGTATAGTAGCCAGCACCT
ATCTCGATACGACCCCGACCCACGATTTATAGAAGGTATGATAGCACGAA
GCATAACACAGACACAACCAACTAAGCGAGATAGGTATCGCGGCTATCTA
CGAACAATGCAACGCCCATCTCCGGTCCTGGTCGGCTGCAGAAGCCAAAA
GGCGGCCACAAAGTCGTGACAGTCTCGCAAAACTTAATCCGCTTCCCACG
CCAGCAGTTGACGACTCGCTGCCACCTTGGAGGCTTACCGGAGTGATGCA
GCCAAGCGATCTGCACAAACAGAGCAGCGGTGGATACCAATCTCAGCGTG
TGATGCAATCAGCTGTGTCTACACCTGCCATAGACCATGAAGGACATGAC
CATCTAGACTCATTAGGATTTTCCAGCACATCAATGTTAGATGGGTTCGT
CGCGGAGGGAGTCAATGTGGATCAAGTATTTCCTTTTGAGGGATACAATG
TGGAGGAACTGTGGAATTGGATGGGATGCCTGGATAGTCCTGGATCAATG
CCTGATATACGGTAG
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Coding sequence (CDS) from alignment at An11:933488..934852+

>CBS51388_006809-T1 ID=CBS51388_006809-T1|Name=CBS51388_006809-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3807bp|location=Sequence derived from alignment at An11:933488..934852+ (Aspergillus niger CBS 513.88)
ATGGTATATCGCGGACGGAACCAGGAAGGTCTGGCCTGGCAAACACTAGG
CATGGCCATTCGGACTGCTTATACACTGGGGATCAACCGGACATCTACAT
CCAATTCCGAAGGAAAGAATATCGAACGACGCGTGTGGGCAGTCTGTTGG
TGCCTGGAAAAGATGATGCATCTGGAATCGGGACGACCAACCGTCATCGG
ATATCAGCATCCTAGGCCAGAGGATGCTCTAGGAGAGAGTAAATTTCTGC
AGTGGCACGTCGAGCTTGGGGAATACCAAGGCAACATCAGTGACCATCTT
TACAGCCATCAATCAGGGACAAGGGATGTACGACAGATACTCTTGGATAC
AGCGCGACTTGACCGCGAACTGTTGTCCTGGGCCAATCGGGTCCCTAGTG
ACCTGCGTCCGGGGAGCGATATCTTCTGCGCGGACGAAGAGTTTCATGCA
GCCGCGTTTCTGTCCATCCAGTACCACAGCACGCTGATCTCGCTGCATCG
CGCGGCCCTCATTGCCCCGACATTGAGCTTTGAGGAAGAAGTGGCAAGGT
ATTGCTCCGATGAGCCATCGCAGTTTCGAATGCGTCATGGAGAGTCAATC
TGCGTGAGCAGCGCTCGAGCGATTGCTAAACTTAGTGTCCAGCTGTCGGA
ACGCAAGGCAGACTCGCAGATCATTACGGCTGGACCGTCCCTTTTGGCTT
GCATTGTGCTGGCCATCTTCCTGATTAAGCATCCAGGTTCTCGGTTGCAG
GCCATGGATTTGCAGCTTCTCAAAGCGTGTTTAGAGTATAGTAGCCAGCA
CCTATCTCGATACGACCCCGACCCACGATTTATAGAAGGTATCGCGGCTA
TCTACGAACAATGCAACGCCCATCTCCGGTCCTGGTCGGCTGCAGAAGCC
AAAAGGCGGCCACAAAGTCGTGACAGTCTCGCAAAACTTAATCCGCTTCC
CACGCCAGCAGTTGACGACTCGCTGCCACCTTGGAGGCTTACCGGAGTGA
TGCAGCCAAGCGATCTGCACAAACAGAGCAGCGGTGGATACCAATCTCAG
CGTGTGATGCAATCAGCTGTGTCTACACCTGCCATAGACCATGAAGGACA
TGACCATCTAGACTCATTAGGATTTTCCAGCACATCAATGTTAGATGGGT
TCGTCGCGGAGGGAGTCAATGTGGATCAAGTATTTCCTTTTGAGGGATAC
AATGTGGAGGAACTGTGGAATTGGATGGGATGCCTGGATAGTCCTGGATC
AATGCCTGATATACGGTAGATGGTATATCGCGGACGGAACCAGGAAGGTC
TGGCCTGGCAAACACTAGGCATGGCCATTCGGACTGCTTATACACTGGGG
ATCAACCGGACATCTACATCCAATTCCGAAGGAAAGAATATCGAACGACG
CGTGTGGGCAGTCTGTTGGTGCCTGGAAAAGATGATGCATCTGGAATCGG
GACGACCAACCGTCATCGGATATCAGCATCCTAGGCCAGAGGATGCTCTA
GGAGAGAGTAAATTTCTGCAGTGGCACGTCGAGCTTGGGGAATACCAAGG
CAACATCAGTGACCATCTTTACAGCCATCAATCAGGGACAAGGGATGTAC
GACAGATACTCTTGGATACAGCGCGACTTGACCGCGAACTGTTGTCCTGG
GCCAATCGGGTCCCTAGTGACCTGCGTCCGGGGAGCGATATCTTCTGCGC
GGACGAAGAGTTTCATGCAGCCGCGTTTCTGTCCATCCAGTACCACAGCA
CGCTGATCTCGCTGCATCGCGCGGCCCTCATTGCCCCGACATTGAGCTTT
GAGGAAGAAGTGGCAAGGTATTGCTCCGATGAGCCATCGCAGTTTCGAAT
GCGTCATGGAGAGTCAATCTGCGTGAGCAGCGCTCGAGCGATTGCTAAAC
TTAGTGTCCAGCTGTCGGAACGCAAGGCAGACTCGCAGATCATTACGGCT
GGACCGTCCCTTTTGGCTTGCATTGTGCTGGCCATCTTCCTGATTAAGCA
TCCAGGTTCTCGGTTGCAGGCCATGGATTTGCAGCTTCTCAAAGCGTGTT
TAGAGTATAGTAGCCAGCACCTATCTCGATACGACCCCGACCCACGATTT
ATAGAAGGTATCGCGGCTATCTACGAACAATGCAACGCCCATCTCCGGTC
CTGGTCGGCTGCAGAAGCCAAAAGGCGGCCACAAAGTCGTGACAGTCTCG
CAAAACTTAATCCGCTTCCCACGCCAGCAGTTGACGACTCGCTGCCACCT
TGGAGGCTTACCGGAGTGATGCAGCCAAGCGATCTGCACAAACAGAGCAG
CGGTGGATACCAATCTCAGCGTGTGATGCAATCAGCTGTGTCTACACCTG
CCATAGACCATGAAGGACATGACCATCTAGACTCATTAGGATTTTCCAGC
ACATCAATGTTAGATGGGTTCGTCGCGGAGGGAGTCAATGTGGATCAAGT
ATTTCCTTTTGAGGGATACAATGTGGAGGAACTGTGGAATTGGATGGGAT
GCCTGGATAGTCCTGGATCAATGCCTGATATACGGTAGATGGTATATCGC
GGACGGAACCAGGAAGGTCTGGCCTGGCAAACACTAGGCATGGCCATTCG
GACTGCTTATACACTGGGGATCAACCGGACATCTACATCCAATTCCGAAG
GAAAGAATATCGAACGACGCGTGTGGGCAGTCTGTTGGTGCCTGGAAAAG
ATGATGCATCTGGAATCGGGACGACCAACCGTCATCGGATATCAGCATCC
TAGGCCAGAGGATGCTCTAGGAGAGAGTAAATTTCTGCAGTGGCACGTCG
AGCTTGGGGAATACCAAGGCAACATCAGTGACCATCTTTACAGCCATCAA
TCAGGGACAAGGGATGTACGACAGATACTCTTGGATACAGCGCGACTTGA
CCGCGAACTGTTGTCCTGGGCCAATCGGGTCCCTAGTGACCTGCGTCCGG
GGAGCGATATCTTCTGCGCGGACGAAGAGTTTCATGCAGCCGCGTTTCTG
TCCATCCAGTACCACAGCACGCTGATCTCGCTGCATCGCGCGGCCCTCAT
TGCCCCGACATTGAGCTTTGAGGAAGAAGTGGCAAGGTATTGCTCCGATG
AGCCATCGCAGTTTCGAATGCGTCATGGAGAGTCAATCTGCGTGAGCAGC
GCTCGAGCGATTGCTAAACTTAGTGTCCAGCTGTCGGAACGCAAGGCAGA
CTCGCAGATCATTACGGCTGGACCGTCCCTTTTGGCTTGCATTGTGCTGG
CCATCTTCCTGATTAAGCATCCAGGTTCTCGGTTGCAGGCCATGGATTTG
CAGCTTCTCAAAGCGTGTTTAGAGTATAGTAGCCAGCACCTATCTCGATA
CGACCCCGACCCACGATTTATAGAAGGTATCGCGGCTATCTACGAACAAT
GCAACGCCCATCTCCGGTCCTGGTCGGCTGCAGAAGCCAAAAGGCGGCCA
CAAAGTCGTGACAGTCTCGCAAAACTTAATCCGCTTCCCACGCCAGCAGT
TGACGACTCGCTGCCACCTTGGAGGCTTACCGGAGTGATGCAGCCAAGCG
ATCTGCACAAACAGAGCAGCGGTGGATACCAATCTCAGCGTGTGATGCAA
TCAGCTGTGTCTACACCTGCCATAGACCATGAAGGACATGACCATCTAGA
CTCATTAGGATTTTCCAGCACATCAATGTTAGATGGGTTCGTCGCGGAGG
GAGTCAATGTGGATCAAGTATTTCCTTTTGAGGGATACAATGTGGAGGAA
CTGTGGAATTGGATGGGATGCCTGGATAGTCCTGGATCAATGCCTGATAT
ACGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006809CBS51388_006809Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006809-T1.exon1CBS51388_006809-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006809-T1.exon2CBS51388_006809-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006809-T1.exon3CBS51388_006809-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006809-T1.cdsCBS51388_006809-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006809-T1CBS51388_006809-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007219
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:933488..934852 +
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