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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:957310..958274+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006820-T1 ID=CBS51388_006820-T1|Name=CBS51388_006820-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=965bp|location=Sequence derived from alignment at An11:957310..958274+ (Aspergillus niger CBS 513.88)
ATGGACGGTATAGCAGGCTACGAAGGTTGGCGCTGGGTAGGTCCTTTCCT
TGGACATCCTTTCATGGCTCCATTGACTGACTACCACACAAGATCTTCAT
CATCGAGGGTCTTGTGACAGTTTTCATGGCCGTTCTTTGCTACTTGCTCC
TCCTAGATTCCCCGGCTCTGTCTCCCGGCTGGCTTACTCAAGACGAGATC
CGATACCTCGAGGTACGACAGCTCGTTTCCAACAACCACGGTGGTCATCA
CAAAGGCTTCAACAAAAAGATAATCTTCAGCGTCCTGACCGATTGGAAAA
TATATCTTCTCATCCTTGGTAACTGGTCCAACGCCGTCCCCAACTACGCC
CTCAAATTTAGTATGCCCGAAATAATCAAATCCATGGGCTACAAATCAGC
CACCGCCCAGCTCATGACAATTCCGCCCTACACCGTCGGCGCCATATCAG
CTTACGGCTTCTCTGTGTTCGCTGATCGCTTTTCCTGGAGAATGCCTTTT
ATCGTGGTACCCCAGTGCTCGCTCATAGCTTCATTCGGCATTCTATTCTC
TAAAGCCGCCAGCATAGAGGAGAACATAGCACTGTGTTATTTTGCCATTT
GCCTTGCCTGCTTTGGAATGTATCCCATCCTTCCTGGCGTTAATGCCTGG
AATGTCTGCAACATTGTCAATCCCCACAAACGAGCTGTGGCTATTGGTTA
TCTTATATGCGTTGGGAATGCGGGTGGTATCATCGGCAGCTATATTTACA
AATCCGATGAAGAACCCAGGTACCCAACTGGTTATGGCACCTCACTTGCA
TTCGCTGCTGCTGGGCTTGTGGCTGCCTTGTGCTTGGAGTTTTGTCTGTG
GAGGGCAAATAAGGAGAAGGCTCGGTTGACCGTGTCCGAAATTGAGGAAA
TGTATACTGAGGAGCAGCTTCGCGATATGGAAGAGAAGAGTCCTCTTTTC
AAGTATACACTGTGA back to topCoding sequence (CDS) from alignment at An11:957310..958274+ >CBS51388_006820-T1 ID=CBS51388_006820-T1|Name=CBS51388_006820-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1818bp|location=Sequence derived from alignment at An11:957310..958274+ (Aspergillus niger CBS 513.88)
ATGGACGGTATAGCAGGCTACGAAGGTTGGCGCTGGATCTTCATCATCGA
GGGTCTTGTGACAGTTTTCATGGCCGTTCTTTGCTACTTGCTCCTCCTAG
ATTCCCCGGCTCTGTCTCCCGGCTGGCTTACTCAAGACGAGATCCGATAC
CTCGAGGTACGACAGCTCGTTTCCAACAACCACGGTGGTCATCACAAAGG
CTTCAACAAAAAGATAATCTTCAGCGTCCTGACCGATTGGAAAATATATC
TTCTCATCCTTGGTAACTGGTCCAACGCCGTCCCCAACTACGCCCTCAAA
TTTAGTATGCCCGAAATAATCAAATCCATGGGCTACAAATCAGCCACCGC
CCAGCTCATGACAATTCCGCCCTACACCGTCGGCGCCATATCAGCTTACG
GCTTCTCTGTGTTCGCTGATCGCTTTTCCTGGAGAATGCCTTTTATCGTG
GTACCCCAGTGCTCGCTCATAGCTTCATTCGGCATTCTATTCTCTAAAGC
CGCCAGCATAGAGGAGAACATAGCACTGTGTTATTTTGCCATTTGCCTTG
CCTGCTTTGGAATGTATCCCATCCTTCCTGGCGTTAATGCCTGGAATGTC
TGCAACATTGTCAATCCCCACAAACGAGCTGTGGCTATTGGTTATCTTAT
ATGCGTTGGGAATGCGGGTGGTATCATCGGCAGCTATATTTACAAATCCG
ATGAAGAACCCAGGTACCCAACTGGTTATGGCACCTCACTTGCATTCGCT
GCTGCTGGGCTTGTGGCTGCCTTGTGCTTGGAGTTTTGTCTGTGGAGGGC
AAATAAGGAGAAGGCTCGGTTGACCGTGTCCGAAATTGAGGAAATGTATA
CTGAGGAGCAGCTTCGCGATATGGAAGAGAAGAGTCCTCTTTTCAAGTAT
ACACTGTGAATGGACGGTATAGCAGGCTACGAAGGTTGGCGCTGGATCTT
CATCATCGAGGGTCTTGTGACAGTTTTCATGGCCGTTCTTTGCTACTTGC
TCCTCCTAGATTCCCCGGCTCTGTCTCCCGGCTGGCTTACTCAAGACGAG
ATCCGATACCTCGAGGTACGACAGCTCGTTTCCAACAACCACGGTGGTCA
TCACAAAGGCTTCAACAAAAAGATAATCTTCAGCGTCCTGACCGATTGGA
AAATATATCTTCTCATCCTTGGTAACTGGTCCAACGCCGTCCCCAACTAC
GCCCTCAAATTTAGTATGCCCGAAATAATCAAATCCATGGGCTACAAATC
AGCCACCGCCCAGCTCATGACAATTCCGCCCTACACCGTCGGCGCCATAT
CAGCTTACGGCTTCTCTGTGTTCGCTGATCGCTTTTCCTGGAGAATGCCT
TTTATCGTGGTACCCCAGTGCTCGCTCATAGCTTCATTCGGCATTCTATT
CTCTAAAGCCGCCAGCATAGAGGAGAACATAGCACTGTGTTATTTTGCCA
TTTGCCTTGCCTGCTTTGGAATGTATCCCATCCTTCCTGGCGTTAATGCC
TGGAATGTCTGCAACATTGTCAATCCCCACAAACGAGCTGTGGCTATTGG
TTATCTTATATGCGTTGGGAATGCGGGTGGTATCATCGGCAGCTATATTT
ACAAATCCGATGAAGAACCCAGGTACCCAACTGGTTATGGCACCTCACTT
GCATTCGCTGCTGCTGGGCTTGTGGCTGCCTTGTGCTTGGAGTTTTGTCT
GTGGAGGGCAAATAAGGAGAAGGCTCGGTTGACCGTGTCCGAAATTGAGG
AAATGTATACTGAGGAGCAGCTTCGCGATATGGAAGAGAAGAGTCCTCTT
TTCAAGTATACACTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_11.5 |
| Note | SMCOG1106:major facilitator transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:957310..958274 + |
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