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CBS51388_006827-T1, CBS51388_006827-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006827-T1
Unique NameCBS51388_006827-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:986347..987738-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006827-T1 ID=CBS51388_006827-T1|Name=CBS51388_006827-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1392bp|location=Sequence derived from alignment at An11:986347..987738- (Aspergillus niger CBS 513.88)
ATGGACTTCCAACGGTTACGTTTCAAACAAGTGATGGTCAGCGGATCTTC
AAATCCGACCACGCAGCAGGAGTACAAGACTTCACCGAACCGAGCGCGAA
ACAAAAGCAAACTGGGCTGCCGAGAATGCAAGACAAAGCGGGTTAAATGC
GATGAGGCCTATCCAACGTGCAAGCGGTGCCAGCGTCGAGGCCTTGTCTG
TTCGTCGGCACCGCGGCCAACACAGTGGCAAGTTGAAGCACCGTGGCTCT
CGTTGCAGCCTAAAACACATGTCAATCGACGTCTACTACAGTATTACCTG
GAGAAAGTCAGCCAAGCGTTCGTTATAGATCCTGAGAACAATCCATTCTC
TTTTCCTATATTGAAAGACATTGCCCAATCTCCGGCACTTCTCCATGCTA
TCCAGTCAATCAGTGCCAGCCATGAACAGTACTTCCCGGTCCAAGCCCCC
ATTCTGGCCCTTGAGGAACGTGGCAAAGCCATAGCTTGCCTTCGAAGAGA
GATAGATCAAGTCCAACGTGCTCATTACACGCACTTTCTGACAATTATGC
TGTTGTCTCTTATGCAAGTTGCTGGTCCTGACCCGAAGGACTACGGCAAA
CAGCACTTATTCGGTGCCTGTGCCTTGATCAACAGTATGCTCCAAGACAC
ATCTGTGTCGACGACTAACGACCCTGTGGTTCGACTCTGCCTGGGAGTCT
ATCTTTACTGGGACATGGGCAGTTCGTTCTTAGTAAAGCCCGGTGAACTA
CAGGGTGTCAACTCATTCCACATATCTCTCGCGGTGCGCAGGATGGGTGA
CTGGCACCACCCAATGTATGGAACATGTAGCCGTCTACTACTTACCATAG
CGAATGTCGGACGATATTGCCGGCAGGTACATGATATGCCGCAGAGACGA
AACTTCGCCCAAGAAGATATGCTGGAGGCGGAGCTTAGTAACTGGACGAC
GAACTCCAATAACCCCGACCTGGTCCACTTATATGAAGCGTTCCGCAACC
ACGGTCTTGTTCTCCTTTATCAATCTCGTGCACATGCACAGAGGAGTCTT
TCTACGGATACGAATTCGACCAAAGCACAAGAGTCATTGATCCTACGGTA
CGCCGAAGAAACAGTCCGTCATCTGATGCTAATCCCTTCGTCCTCGTACT
ATCTCAATTTTCAATCCCTCGCTCTTCTATCAGCCGGGTCCGAATTGACC
GAGTCGCATCACCTCCTGCGCGATAAAGTGCGTGACAGACTGCGCGCCAT
CTACTCTTTGAATCGCATACCCGCAAATTTAATGGCTCTTCAACTTGTTG
AAGAACTTTGGGATGCCCGAGACAGTGCTAATTCCACTTCCTTCTGGCTA
TCGCACATGCTGCAGAAGGATTGGCTGTTGCTTCTAGTATAA
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Coding sequence (CDS) from alignment at An11:986347..987738-

>CBS51388_006827-T1 ID=CBS51388_006827-T1|Name=CBS51388_006827-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1392bp|location=Sequence derived from alignment at An11:986347..987738- (Aspergillus niger CBS 513.88)
ATGGACTTCCAACGGTTACGTTTCAAACAAGTGATGGTCAGCGGATCTTC
AAATCCGACCACGCAGCAGGAGTACAAGACTTCACCGAACCGAGCGCGAA
ACAAAAGCAAACTGGGCTGCCGAGAATGCAAGACAAAGCGGGTTAAATGC
GATGAGGCCTATCCAACGTGCAAGCGGTGCCAGCGTCGAGGCCTTGTCTG
TTCGTCGGCACCGCGGCCAACACAGTGGCAAGTTGAAGCACCGTGGCTCT
CGTTGCAGCCTAAAACACATGTCAATCGACGTCTACTACAGTATTACCTG
GAGAAAGTCAGCCAAGCGTTCGTTATAGATCCTGAGAACAATCCATTCTC
TTTTCCTATATTGAAAGACATTGCCCAATCTCCGGCACTTCTCCATGCTA
TCCAGTCAATCAGTGCCAGCCATGAACAGTACTTCCCGGTCCAAGCCCCC
ATTCTGGCCCTTGAGGAACGTGGCAAAGCCATAGCTTGCCTTCGAAGAGA
GATAGATCAAGTCCAACGTGCTCATTACACGCACTTTCTGACAATTATGC
TGTTGTCTCTTATGCAAGTTGCTGGTCCTGACCCGAAGGACTACGGCAAA
CAGCACTTATTCGGTGCCTGTGCCTTGATCAACAGTATGCTCCAAGACAC
ATCTGTGTCGACGACTAACGACCCTGTGGTTCGACTCTGCCTGGGAGTCT
ATCTTTACTGGGACATGGGCAGTTCGTTCTTAGTAAAGCCCGGTGAACTA
CAGGGTGTCAACTCATTCCACATATCTCTCGCGGTGCGCAGGATGGGTGA
CTGGCACCACCCAATGTATGGAACATGTAGCCGTCTACTACTTACCATAG
CGAATGTCGGACGATATTGCCGGCAGGTACATGATATGCCGCAGAGACGA
AACTTCGCCCAAGAAGATATGCTGGAGGCGGAGCTTAGTAACTGGACGAC
GAACTCCAATAACCCCGACCTGGTCCACTTATATGAAGCGTTCCGCAACC
ACGGTCTTGTTCTCCTTTATCAATCTCGTGCACATGCACAGAGGAGTCTT
TCTACGGATACGAATTCGACCAAAGCACAAGAGTCATTGATCCTACGGTA
CGCCGAAGAAACAGTCCGTCATCTGATGCTAATCCCTTCGTCCTCGTACT
ATCTCAATTTTCAATCCCTCGCTCTTCTATCAGCCGGGTCCGAATTGACC
GAGTCGCATCACCTCCTGCGCGATAAAGTGCGTGACAGACTGCGCGCCAT
CTACTCTTTGAATCGCATACCCGCAAATTTAATGGCTCTTCAACTTGTTG
AAGAACTTTGGGATGCCCGAGACAGTGCTAATTCCACTTCCTTCTGGCTA
TCGCACATGCTGCAGAAGGATTGGCTGTTGCTTCTAGTATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006827CBS51388_006827Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006827-T1.cdsCBS51388_006827-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006827-T1.exon1CBS51388_006827-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006827-T1CBS51388_006827-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_11.5
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:986347..987738 -
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