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CBS51388_006831-T1, CBS51388_006831-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006831-T1
Unique NameCBS51388_006831-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:996266..998006-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006831-T1 ID=CBS51388_006831-T1|Name=CBS51388_006831-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1741bp|location=Sequence derived from alignment at An11:996266..998006- (Aspergillus niger CBS 513.88)
ATGCGGATTCACGTTATCCAATATCCCGCAATCCAACCCTTATTTTTAAA
GCAGGATAAACTCGTCAGCATGAATGCTCGCCGTCGGGTGCACCTTGCCG
GAAAGGCTTGCGCACGATGTAGATCGCAGAAGAGGCGATGCGACAGGGCT
ACTCCTCAATGCGGACTATGTCGGAGGTGAGTGCTTGTTTGAAATGGTAT
TTTGACGCCGTGAAATCACTAACACAGACTCTAGACTTCGTCAAGCCTGT
CACTATAAAGGACAGGTGGTATCATCTCCAAGTTCGACACCCTCGTCCCC
CCTCGATGCAGAGCTCCACCTTGGAGTGTTGAATTCTGGCCATATCAAAG
ACGCTATTGCTACGAAACTCACATCAGCCCCGAGCGATATCTTTGCGACA
TACATCCAATCCATCCATCCTTGGTTCCCTATTATCGCACTAACATTACA
GGATCAGCTCCCGAAATCCTGGAACGAAGCTTCCCTGGATTACACGCTCC
TCGCCCTTTGTATTAGTTTGCTTTGCACCTCCCCGCCTCCCTCTTCAGGG
GACGGGACTCTGTCTGGTCTTCAGTCCACGTACCTACATATCAAGAGCTG
GATCGCAGTGATCGAAGGACTCGGTATTACCTCGCTCAAAATCGTCCAAG
CAAGGACACTGGTCACCCTATTTGAAGTTGCACATGGCTTCTACCCGGCA
GCGTACATCTCTATTGGGACTACTGTCAGAGCTGCCGATGCACTTAAACT
TCATGATTACTCACCTCCATCATCTTCACTGCCTACTAACGAAGAGTCAG
CGAGGGAGGAGGCCGTACTAGTCGGGTGCGCAATCCGTATTTTGGACAGG
TACGGGTCCCAATTCATCCCTCAAACCTATAAGTCCCCTTTCGTCCTGAC
AACATTATAGATATATAACAGTACAATCTGGACATCGTCCACTTCTCACT
TGCTCTACCTTAAAGGGTATTTATGACCCCAACAAAGCCCCCTGGCCCAC
CGGCATCGACAAAGACACGGGGCATCCTCTCTGGCAACTCTCCCGTCTGT
TCGAGGCGTCCACACTTCTTGATAACATTCACAATGCGTTAAAAAACCCC
ACTTCAGAACGAACATTCAACACAGAAGAAATAAGACTTTTGGTTGAGAC
ATCATATACCCTCCGCACGCTCTTAATCGAAGAGGTTGAAGATGCGGACC
AGATATACTCCGGTGGGCTAGGACTTTGTCAGACGTTAGTTGAGCCGCGT
TCTTCTTTTACAGATCTCCTTGAAATATTCGCATCGATACTGATGTTGCA
CAGTGGTATTTTGCTAGCCTACGAGAACGGTACCAAAGTCCAGATTACCG
ATGCACAAACTCTAACTTGCCAAACACTTGCCACATCATCTATAAACCCC
CTTCTCACCACCATAACTGACATGGTCCACCCCTTTGTTAGTGGTGCACA
AGTCTTAGACTTGGATCGCTTTCCTCCCTTTATCACATTTCTTGTGTACA
AAGCGGCAAGCATAGTGACAGAGAGGATATGGATGGAAACTGACACCAAT
GAGGCCTTGAGAAAGTTACGAATCCTGAGAGGATTCTTACAAATGGTGAA
CGCAAGGTGGTTATGTTGCGGTACGTTGACCCAAAAGCGTCTAGGACTGG
GTTGGCTAACTGTGCGTAAATAGAGTATTACCTTGGCCTTCTCAATGAGA
ATACGGCGCCGCGAATATTAAAATCTATTGAGGGCAGGTAA
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Coding sequence (CDS) from alignment at An11:996266..998006-

>CBS51388_006831-T1 ID=CBS51388_006831-T1|Name=CBS51388_006831-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7500bp|location=Sequence derived from alignment at An11:996266..998006- (Aspergillus niger CBS 513.88)
AGTATTACCTTGGCCTTCTCAATGAGAATACGGCGCCGCGAATATTAAAA
TCTATTGAGGGCAGGTAATGGTATTTTGCTAGCCTACGAGAACGGTACCA
AAGTCCAGATTACCGATGCACAAACTCTAACTTGCCAAACACTTGCCACA
TCATCTATAAACCCCCTTCTCACCACCATAACTGACATGGTCCACCCCTT
TGTTAGTGGTGCACAAGTCTTAGACTTGGATCGCTTTCCTCCCTTTATCA
CATTTCTTGTGTACAAAGCGGCAAGCATAGTGACAGAGAGGATATGGATG
GAAACTGACACCAATGAGGCCTTGAGAAAGTTACGAATCCTGAGAGGATT
CTTACAAATGGTGAACGCAAGGTGGTTATGTTGCGATATATAACAGTACA
ATCTGGACATCGTCCACTTCTCACTTGCTCTACCTTAAAGGGTATTTATG
ACCCCAACAAAGCCCCCTGGCCCACCGGCATCGACAAAGACACGGGGCAT
CCTCTCTGGCAACTCTCCCGTCTGTTCGAGGCGTCCACACTTCTTGATAA
CATTCACAATGCGTTAAAAAACCCCACTTCAGAACGAACATTCAACACAG
AAGAAATAAGACTTTTGGTTGAGACATCATATACCCTCCGCACGCTCTTA
ATCGAAGAGGTTGAAGATGCGGACCAGATATACTCCGGTGGGCTAGGACT
TTGTCAGACACTTCGTCAAGCCTGTCACTATAAAGGACAGGTGGTATCAT
CTCCAAGTTCGACACCCTCGTCCCCCCTCGATGCAGAGCTCCACCTTGGA
GTGTTGAATTCTGGCCATATCAAAGACGCTATTGCTACGAAACTCACATC
AGCCCCGAGCGATATCTTTGCGACATACATCCAATCCATCCATCCTTGGT
TCCCTATTATCGCACTAACATTACAGGATCAGCTCCCGAAATCCTGGAAC
GAAGCTTCCCTGGATTACACGCTCCTCGCCCTTTGTATTAGTTTGCTTTG
CACCTCCCCGCCTCCCTCTTCAGGGGACGGGACTCTGTCTGGTCTTCAGT
CCACGTACCTACATATCAAGAGCTGGATCGCAGTGATCGAAGGACTCGGT
ATTACCTCGCTCAAAATCGTCCAAGCAAGGACACTGGTCACCCTATTTGA
AGTTGCACATGGCTTCTACCCGGCAGCGTACATCTCTATTGGGACTACTG
TCAGAGCTGCCGATGCACTTAAACTTCATGATTACTCACCTCCATCATCT
TCACTGCCTACTAACGAAGAGTCAGCGAGGGAGGAGGCCGTACTAGTCGG
GTGCGCAATCCGTATTTTGGACAGATGCGGATTCACGTTATCCAATATCC
CGCAATCCAACCCTTATTTTTAAAGCAGGATAAACTCGTCAGCATGAATG
CTCGCCGTCGGGTGCACCTTGCCGGAAAGGCTTGCGCACGATGTAGATCG
CAGAAGAGGCGATGCGACAGGGCTACTCCTCAATGCGGACTATGTCGGAG
AGTATTACCTTGGCCTTCTCAATGAGAATACGGCGCCGCGAATATTAAAA
TCTATTGAGGGCAGGTAATGGTATTTTGCTAGCCTACGAGAACGGTACCA
AAGTCCAGATTACCGATGCACAAACTCTAACTTGCCAAACACTTGCCACA
TCATCTATAAACCCCCTTCTCACCACCATAACTGACATGGTCCACCCCTT
TGTTAGTGGTGCACAAGTCTTAGACTTGGATCGCTTTCCTCCCTTTATCA
CATTTCTTGTGTACAAAGCGGCAAGCATAGTGACAGAGAGGATATGGATG
GAAACTGACACCAATGAGGCCTTGAGAAAGTTACGAATCCTGAGAGGATT
CTTACAAATGGTGAACGCAAGGTGGTTATGTTGCGATATATAACAGTACA
ATCTGGACATCGTCCACTTCTCACTTGCTCTACCTTAAAGGGTATTTATG
ACCCCAACAAAGCCCCCTGGCCCACCGGCATCGACAAAGACACGGGGCAT
CCTCTCTGGCAACTCTCCCGTCTGTTCGAGGCGTCCACACTTCTTGATAA
CATTCACAATGCGTTAAAAAACCCCACTTCAGAACGAACATTCAACACAG
AAGAAATAAGACTTTTGGTTGAGACATCATATACCCTCCGCACGCTCTTA
ATCGAAGAGGTTGAAGATGCGGACCAGATATACTCCGGTGGGCTAGGACT
TTGTCAGACACTTCGTCAAGCCTGTCACTATAAAGGACAGGTGGTATCAT
CTCCAAGTTCGACACCCTCGTCCCCCCTCGATGCAGAGCTCCACCTTGGA
GTGTTGAATTCTGGCCATATCAAAGACGCTATTGCTACGAAACTCACATC
AGCCCCGAGCGATATCTTTGCGACATACATCCAATCCATCCATCCTTGGT
TCCCTATTATCGCACTAACATTACAGGATCAGCTCCCGAAATCCTGGAAC
GAAGCTTCCCTGGATTACACGCTCCTCGCCCTTTGTATTAGTTTGCTTTG
CACCTCCCCGCCTCCCTCTTCAGGGGACGGGACTCTGTCTGGTCTTCAGT
CCACGTACCTACATATCAAGAGCTGGATCGCAGTGATCGAAGGACTCGGT
ATTACCTCGCTCAAAATCGTCCAAGCAAGGACACTGGTCACCCTATTTGA
AGTTGCACATGGCTTCTACCCGGCAGCGTACATCTCTATTGGGACTACTG
TCAGAGCTGCCGATGCACTTAAACTTCATGATTACTCACCTCCATCATCT
TCACTGCCTACTAACGAAGAGTCAGCGAGGGAGGAGGCCGTACTAGTCGG
GTGCGCAATCCGTATTTTGGACAGATGCGGATTCACGTTATCCAATATCC
CGCAATCCAACCCTTATTTTTAAAGCAGGATAAACTCGTCAGCATGAATG
CTCGCCGTCGGGTGCACCTTGCCGGAAAGGCTTGCGCACGATGTAGATCG
CAGAAGAGGCGATGCGACAGGGCTACTCCTCAATGCGGACTATGTCGGAG
AGTATTACCTTGGCCTTCTCAATGAGAATACGGCGCCGCGAATATTAAAA
TCTATTGAGGGCAGGTAATGGTATTTTGCTAGCCTACGAGAACGGTACCA
AAGTCCAGATTACCGATGCACAAACTCTAACTTGCCAAACACTTGCCACA
TCATCTATAAACCCCCTTCTCACCACCATAACTGACATGGTCCACCCCTT
TGTTAGTGGTGCACAAGTCTTAGACTTGGATCGCTTTCCTCCCTTTATCA
CATTTCTTGTGTACAAAGCGGCAAGCATAGTGACAGAGAGGATATGGATG
GAAACTGACACCAATGAGGCCTTGAGAAAGTTACGAATCCTGAGAGGATT
CTTACAAATGGTGAACGCAAGGTGGTTATGTTGCGATATATAACAGTACA
ATCTGGACATCGTCCACTTCTCACTTGCTCTACCTTAAAGGGTATTTATG
ACCCCAACAAAGCCCCCTGGCCCACCGGCATCGACAAAGACACGGGGCAT
CCTCTCTGGCAACTCTCCCGTCTGTTCGAGGCGTCCACACTTCTTGATAA
CATTCACAATGCGTTAAAAAACCCCACTTCAGAACGAACATTCAACACAG
AAGAAATAAGACTTTTGGTTGAGACATCATATACCCTCCGCACGCTCTTA
ATCGAAGAGGTTGAAGATGCGGACCAGATATACTCCGGTGGGCTAGGACT
TTGTCAGACACTTCGTCAAGCCTGTCACTATAAAGGACAGGTGGTATCAT
CTCCAAGTTCGACACCCTCGTCCCCCCTCGATGCAGAGCTCCACCTTGGA
GTGTTGAATTCTGGCCATATCAAAGACGCTATTGCTACGAAACTCACATC
AGCCCCGAGCGATATCTTTGCGACATACATCCAATCCATCCATCCTTGGT
TCCCTATTATCGCACTAACATTACAGGATCAGCTCCCGAAATCCTGGAAC
GAAGCTTCCCTGGATTACACGCTCCTCGCCCTTTGTATTAGTTTGCTTTG
CACCTCCCCGCCTCCCTCTTCAGGGGACGGGACTCTGTCTGGTCTTCAGT
CCACGTACCTACATATCAAGAGCTGGATCGCAGTGATCGAAGGACTCGGT
ATTACCTCGCTCAAAATCGTCCAAGCAAGGACACTGGTCACCCTATTTGA
AGTTGCACATGGCTTCTACCCGGCAGCGTACATCTCTATTGGGACTACTG
TCAGAGCTGCCGATGCACTTAAACTTCATGATTACTCACCTCCATCATCT
TCACTGCCTACTAACGAAGAGTCAGCGAGGGAGGAGGCCGTACTAGTCGG
GTGCGCAATCCGTATTTTGGACAGATGCGGATTCACGTTATCCAATATCC
CGCAATCCAACCCTTATTTTTAAAGCAGGATAAACTCGTCAGCATGAATG
CTCGCCGTCGGGTGCACCTTGCCGGAAAGGCTTGCGCACGATGTAGATCG
CAGAAGAGGCGATGCGACAGGGCTACTCCTCAATGCGGACTATGTCGGAG
AGTATTACCTTGGCCTTCTCAATGAGAATACGGCGCCGCGAATATTAAAA
TCTATTGAGGGCAGGTAATGGTATTTTGCTAGCCTACGAGAACGGTACCA
AAGTCCAGATTACCGATGCACAAACTCTAACTTGCCAAACACTTGCCACA
TCATCTATAAACCCCCTTCTCACCACCATAACTGACATGGTCCACCCCTT
TGTTAGTGGTGCACAAGTCTTAGACTTGGATCGCTTTCCTCCCTTTATCA
CATTTCTTGTGTACAAAGCGGCAAGCATAGTGACAGAGAGGATATGGATG
GAAACTGACACCAATGAGGCCTTGAGAAAGTTACGAATCCTGAGAGGATT
CTTACAAATGGTGAACGCAAGGTGGTTATGTTGCGATATATAACAGTACA
ATCTGGACATCGTCCACTTCTCACTTGCTCTACCTTAAAGGGTATTTATG
ACCCCAACAAAGCCCCCTGGCCCACCGGCATCGACAAAGACACGGGGCAT
CCTCTCTGGCAACTCTCCCGTCTGTTCGAGGCGTCCACACTTCTTGATAA
CATTCACAATGCGTTAAAAAACCCCACTTCAGAACGAACATTCAACACAG
AAGAAATAAGACTTTTGGTTGAGACATCATATACCCTCCGCACGCTCTTA
ATCGAAGAGGTTGAAGATGCGGACCAGATATACTCCGGTGGGCTAGGACT
TTGTCAGACACTTCGTCAAGCCTGTCACTATAAAGGACAGGTGGTATCAT
CTCCAAGTTCGACACCCTCGTCCCCCCTCGATGCAGAGCTCCACCTTGGA
GTGTTGAATTCTGGCCATATCAAAGACGCTATTGCTACGAAACTCACATC
AGCCCCGAGCGATATCTTTGCGACATACATCCAATCCATCCATCCTTGGT
TCCCTATTATCGCACTAACATTACAGGATCAGCTCCCGAAATCCTGGAAC
GAAGCTTCCCTGGATTACACGCTCCTCGCCCTTTGTATTAGTTTGCTTTG
CACCTCCCCGCCTCCCTCTTCAGGGGACGGGACTCTGTCTGGTCTTCAGT
CCACGTACCTACATATCAAGAGCTGGATCGCAGTGATCGAAGGACTCGGT
ATTACCTCGCTCAAAATCGTCCAAGCAAGGACACTGGTCACCCTATTTGA
AGTTGCACATGGCTTCTACCCGGCAGCGTACATCTCTATTGGGACTACTG
TCAGAGCTGCCGATGCACTTAAACTTCATGATTACTCACCTCCATCATCT
TCACTGCCTACTAACGAAGAGTCAGCGAGGGAGGAGGCCGTACTAGTCGG
GTGCGCAATCCGTATTTTGGACAGATGCGGATTCACGTTATCCAATATCC
CGCAATCCAACCCTTATTTTTAAAGCAGGATAAACTCGTCAGCATGAATG
CTCGCCGTCGGGTGCACCTTGCCGGAAAGGCTTGCGCACGATGTAGATCG
CAGAAGAGGCGATGCGACAGGGCTACTCCTCAATGCGGACTATGTCGGAG
AGTATTACCTTGGCCTTCTCAATGAGAATACGGCGCCGCGAATATTAAAA
TCTATTGAGGGCAGGTAATGGTATTTTGCTAGCCTACGAGAACGGTACCA
AAGTCCAGATTACCGATGCACAAACTCTAACTTGCCAAACACTTGCCACA
TCATCTATAAACCCCCTTCTCACCACCATAACTGACATGGTCCACCCCTT
TGTTAGTGGTGCACAAGTCTTAGACTTGGATCGCTTTCCTCCCTTTATCA
CATTTCTTGTGTACAAAGCGGCAAGCATAGTGACAGAGAGGATATGGATG
GAAACTGACACCAATGAGGCCTTGAGAAAGTTACGAATCCTGAGAGGATT
CTTACAAATGGTGAACGCAAGGTGGTTATGTTGCGATATATAACAGTACA
ATCTGGACATCGTCCACTTCTCACTTGCTCTACCTTAAAGGGTATTTATG
ACCCCAACAAAGCCCCCTGGCCCACCGGCATCGACAAAGACACGGGGCAT
CCTCTCTGGCAACTCTCCCGTCTGTTCGAGGCGTCCACACTTCTTGATAA
CATTCACAATGCGTTAAAAAACCCCACTTCAGAACGAACATTCAACACAG
AAGAAATAAGACTTTTGGTTGAGACATCATATACCCTCCGCACGCTCTTA
ATCGAAGAGGTTGAAGATGCGGACCAGATATACTCCGGTGGGCTAGGACT
TTGTCAGACACTTCGTCAAGCCTGTCACTATAAAGGACAGGTGGTATCAT
CTCCAAGTTCGACACCCTCGTCCCCCCTCGATGCAGAGCTCCACCTTGGA
GTGTTGAATTCTGGCCATATCAAAGACGCTATTGCTACGAAACTCACATC
AGCCCCGAGCGATATCTTTGCGACATACATCCAATCCATCCATCCTTGGT
TCCCTATTATCGCACTAACATTACAGGATCAGCTCCCGAAATCCTGGAAC
GAAGCTTCCCTGGATTACACGCTCCTCGCCCTTTGTATTAGTTTGCTTTG
CACCTCCCCGCCTCCCTCTTCAGGGGACGGGACTCTGTCTGGTCTTCAGT
CCACGTACCTACATATCAAGAGCTGGATCGCAGTGATCGAAGGACTCGGT
ATTACCTCGCTCAAAATCGTCCAAGCAAGGACACTGGTCACCCTATTTGA
AGTTGCACATGGCTTCTACCCGGCAGCGTACATCTCTATTGGGACTACTG
TCAGAGCTGCCGATGCACTTAAACTTCATGATTACTCACCTCCATCATCT
TCACTGCCTACTAACGAAGAGTCAGCGAGGGAGGAGGCCGTACTAGTCGG
GTGCGCAATCCGTATTTTGGACAGATGCGGATTCACGTTATCCAATATCC
CGCAATCCAACCCTTATTTTTAAAGCAGGATAAACTCGTCAGCATGAATG
CTCGCCGTCGGGTGCACCTTGCCGGAAAGGCTTGCGCACGATGTAGATCG
CAGAAGAGGCGATGCGACAGGGCTACTCCTCAATGCGGACTATGTCGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006831CBS51388_006831Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006831-T1CBS51388_006831-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006831-T1.cdsCBS51388_006831-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006831-T1.exon5CBS51388_006831-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_006831-T1.exon4CBS51388_006831-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_006831-T1.exon3CBS51388_006831-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006831-T1.exon2CBS51388_006831-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006831-T1.exon1CBS51388_006831-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:996266..998006 -
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