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CBS51388_006836-T1, CBS51388_006836-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006836-T1
Unique NameCBS51388_006836-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1006201..1007913+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006836-T1 ID=CBS51388_006836-T1|Name=CBS51388_006836-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1713bp|location=Sequence derived from alignment at An11:1006201..1007913+ (Aspergillus niger CBS 513.88)
ATGTCCCTAGTCCTCGACTCCGTGATCCCACGCCCTGCCACAGACGACTA
CTACAACCTTGGCACATACAGTCGACCCATCATCACTACGAATCAAGATG
CGCAGATCTGGTTTGACCGCGGCCTCATTTGGTGCTACGCCTTCAATCAC
GCCGAAGGCTATCGATGCTTTGAACAGGCAATAGCCCAAGACCGCAACTG
CGCCATCGCCTACTGGGGCCTAGCTTACGCAATGGGACCAAACTATAACA
AAGCCTGGCGTCTGTTCGATCCAGTGGACCTCAAGAATAGCATGAAGCTG
TGCCATGAGGCTGCACAGAAAGCTTTAGAGCTCTCTCAAATAGCGTCCGT
TACGCCCGTCGAGCGCGCACTTATAGAAGCTATGCAAACTCGCTTCCCCG
TTGACCATCCTGCCGAAGACTACGACCAGATCAACCACGCCTACGATGCA
GCAATGAAGAAGGTCTATGATCAGTTCCCAACTGATCTCGATGTCATGGC
TCTTTACATAGACGCAAAGATGCATACGGCCCAGCGCAAGATGTTCCACA
TCAAGACTGGTCTCCCCATCGAGACGTCTCCCGTTTACGACGTGCAGAAG
CTCTTCAGAGATGGCTTGGCCCTTCCTGGCGCAGATACTCATCCGGGTCT
GCTTCATTTCTGTATTCATTTCTGGGAAATGTCCGCCACTCCGGCCGTTG
CGCTCCCACCAGCAGACGCTCTGCGCCATCTTGTCCCTGACGCTGGGCAC
CTGCATCACATGCCTTCTCATCTCGATGTTCTGGTTGGCGATTACCGTCG
CTCGGTCGACTCAAATACTGCCGCAGTTCAAGCAGACGAGGAATTTCTCG
CCCGTGAAGGCGCAAAGAACATGTACAGCTTCTACCGTCTTCACAACTAC
CATTCGCTCGTGTACGCGGCAATGCTCTCCGGTCAATCCAAAATCGCTCT
AAGAGCTGTAGACCAGATGGAAGCATCGATCACAGACGACGTACTTCGGG
TAGACTCCCCTCCACTAGCAGACTGGCTCGAGTTCTTCAAGTCAGTACGC
GTTCATGTCTACGTCCGCTTCGGGCTCTGGAAGGAGCTCAAGGCACTCCC
AATCCCTGAAGATCAGGACCTCTACTGCGTCACCACAGCCATGACACACT
ACGGCAAAGCGGTCGCGTTCGCAGCTACGAACAACGTTCCGGAAGCACTG
AAGGAACGCACTCTCTTCCAAGCGGCCGCTAAACGCGTTCCTCCCAGCCG
GAAAGACTACCCGAACCTGATCATTGATATTCTAAAGGTTGCAACCGCTA
TGCTAGACGGCGAGATCGAGTACCGTCGAGGGAACTTTACGCAGGCGTTT
GAGAGTCTGCGGGAAGCGATTCGTCATGACGATGCGCTGATGTATACCGA
ACCTTGGGGCTGGATGTTACCTACGCGACATGCGTATGCGGCCTTGTCGC
TGGAGCAGGGTCATGTGGAGGAAGCTGCGAGGGCGTATGCGGAGGATTTG
GGTCTTGATGCGGAAATTACTCGAGCGCATCAGCATCCGAATAATGTGTG
GGCGCTGCATGGGTATCATGAGTGTTTGATGAGGTTGGGACGCGGAGCAG
AGGCACTTATCATTAAACAGCAGCTGGATGTTGCTTTGAGTGTGGCTGAT
GTGGATATTAAGTCTTCGTGCTTTTGTCGGCTGGGTGTGCAGGGATCGCA
GTGTTGTTCGTGA
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Coding sequence (CDS) from alignment at An11:1006201..1007913+

>CBS51388_006836-T1 ID=CBS51388_006836-T1|Name=CBS51388_006836-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1713bp|location=Sequence derived from alignment at An11:1006201..1007913+ (Aspergillus niger CBS 513.88)
ATGTCCCTAGTCCTCGACTCCGTGATCCCACGCCCTGCCACAGACGACTA
CTACAACCTTGGCACATACAGTCGACCCATCATCACTACGAATCAAGATG
CGCAGATCTGGTTTGACCGCGGCCTCATTTGGTGCTACGCCTTCAATCAC
GCCGAAGGCTATCGATGCTTTGAACAGGCAATAGCCCAAGACCGCAACTG
CGCCATCGCCTACTGGGGCCTAGCTTACGCAATGGGACCAAACTATAACA
AAGCCTGGCGTCTGTTCGATCCAGTGGACCTCAAGAATAGCATGAAGCTG
TGCCATGAGGCTGCACAGAAAGCTTTAGAGCTCTCTCAAATAGCGTCCGT
TACGCCCGTCGAGCGCGCACTTATAGAAGCTATGCAAACTCGCTTCCCCG
TTGACCATCCTGCCGAAGACTACGACCAGATCAACCACGCCTACGATGCA
GCAATGAAGAAGGTCTATGATCAGTTCCCAACTGATCTCGATGTCATGGC
TCTTTACATAGACGCAAAGATGCATACGGCCCAGCGCAAGATGTTCCACA
TCAAGACTGGTCTCCCCATCGAGACGTCTCCCGTTTACGACGTGCAGAAG
CTCTTCAGAGATGGCTTGGCCCTTCCTGGCGCAGATACTCATCCGGGTCT
GCTTCATTTCTGTATTCATTTCTGGGAAATGTCCGCCACTCCGGCCGTTG
CGCTCCCACCAGCAGACGCTCTGCGCCATCTTGTCCCTGACGCTGGGCAC
CTGCATCACATGCCTTCTCATCTCGATGTTCTGGTTGGCGATTACCGTCG
CTCGGTCGACTCAAATACTGCCGCAGTTCAAGCAGACGAGGAATTTCTCG
CCCGTGAAGGCGCAAAGAACATGTACAGCTTCTACCGTCTTCACAACTAC
CATTCGCTCGTGTACGCGGCAATGCTCTCCGGTCAATCCAAAATCGCTCT
AAGAGCTGTAGACCAGATGGAAGCATCGATCACAGACGACGTACTTCGGG
TAGACTCCCCTCCACTAGCAGACTGGCTCGAGTTCTTCAAGTCAGTACGC
GTTCATGTCTACGTCCGCTTCGGGCTCTGGAAGGAGCTCAAGGCACTCCC
AATCCCTGAAGATCAGGACCTCTACTGCGTCACCACAGCCATGACACACT
ACGGCAAAGCGGTCGCGTTCGCAGCTACGAACAACGTTCCGGAAGCACTG
AAGGAACGCACTCTCTTCCAAGCGGCCGCTAAACGCGTTCCTCCCAGCCG
GAAAGACTACCCGAACCTGATCATTGATATTCTAAAGGTTGCAACCGCTA
TGCTAGACGGCGAGATCGAGTACCGTCGAGGGAACTTTACGCAGGCGTTT
GAGAGTCTGCGGGAAGCGATTCGTCATGACGATGCGCTGATGTATACCGA
ACCTTGGGGCTGGATGTTACCTACGCGACATGCGTATGCGGCCTTGTCGC
TGGAGCAGGGTCATGTGGAGGAAGCTGCGAGGGCGTATGCGGAGGATTTG
GGTCTTGATGCGGAAATTACTCGAGCGCATCAGCATCCGAATAATGTGTG
GGCGCTGCATGGGTATCATGAGTGTTTGATGAGGTTGGGACGCGGAGCAG
AGGCACTTATCATTAAACAGCAGCTGGATGTTGCTTTGAGTGTGGCTGAT
GTGGATATTAAGTCTTCGTGCTTTTGTCGGCTGGGTGTGCAGGGATCGCA
GTGTTGTTCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006836CBS51388_006836Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006836-T1.exon1CBS51388_006836-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006836-T1.cdsCBS51388_006836-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006836-T1CBS51388_006836-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1006201..1007913 +
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